Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_H01
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 41 0.001
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 40 0.002
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 40 0.002
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 40 0.002
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 40 0.002
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 40 0.002
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 38 0.007
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 37 0.015
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 35 0.062
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 35 0.082
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 35 0.082
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 35 0.082
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 34 0.14
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 34 0.14
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 34 0.14
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.19
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 32 0.44
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 32 0.44
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 32 0.44
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 32 0.58
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 31 1.0
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 30 1.8
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 30 1.8
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 30 1.8
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 30 1.8
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 30 1.8
AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 30 1.8
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 30 1.8
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 30 1.8
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 29 3.1
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 29 4.1
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 5.4
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 5.4
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 29 5.4
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 29 5.4
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 28 7.2
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 28 9.5
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 28 9.5
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 28 9.5
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 130 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL 306
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMI 121
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRI 228
T +A +E +S S + LL +++ SPPD ++ ++ + L H I E +++
Sbjct: 56 TVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQV 114
Query: 229 LADLQMNWIDKRLSWNAGEW-GCS-TWL 306
L + W D LSW E+ G TWL
Sbjct: 115 LVYIVQQWTDASLSWKVEEFRGIKHTWL 142
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 282
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 EWG--CSTWL 306
+G TW+
Sbjct: 130 LFGGITKTWI 139
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 282
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 EWG--CSTWL 306
+G TW+
Sbjct: 130 LFGGITKTWI 139
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 282
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 EWG--CSTWL 306
+G TW+
Sbjct: 130 LFGGITKTWI 139
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 282
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 EWG--CSTWL 306
+G TW+
Sbjct: 130 LFGGITKTWI 139
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 282
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 EWG--CSTWL 306
+G TW+
Sbjct: 130 LFGGITKTWI 139
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 282
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 283 EWG--CSTWL 306
+G TW+
Sbjct: 130 LFGGITKTWI 139
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +1
Query: 67 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 246
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 247 NWIDKRLSWNAGEWGCSTWL 306
+W D +SW+ +WG S WL
Sbjct: 114 SWNDTMVSWDKEQWGLS-WL 132
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +1
Query: 109 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 267
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 268 SWNAGEW 288
SWNA ++
Sbjct: 110 SWNASDY 116
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 145 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
PP +I + L++ ++ + E E L D + +W D RLSW+ ++G
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYG 126
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 97 LSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRESESTVRILADLQMNWIDK 261
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 262 RLSWNAGEWG 291
+L+WN +WG
Sbjct: 89 KLTWNPTDWG 98
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 145 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
PP +++ + + + L+ ++ E E V L D W D+RL WN E+G
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYG 98
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.082
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +1
Query: 70 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 228
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 229 LADLQMNWIDKRLSWNAGEWGCSTWLVSSATLV 327
+ W D RLSW+ ++ ++ T+V
Sbjct: 117 VISHTQRWYDGRLSWDPSKYRGQREVIVPQTMV 149
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 271 WNAGEWG 291
W+ +G
Sbjct: 90 WDPVNYG 96
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 271 WNAGEWG 291
W+ +G
Sbjct: 90 WDPVNYG 96
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 271 WNAGEWG 291
W+ +G
Sbjct: 90 WDPVNYG 96
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 172 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 279
L +L+ ++E E V ++ +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +1
Query: 106 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 271 W 273
W
Sbjct: 85 W 85
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 82 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 255
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 256 DKRLSWNAGEWGCSTWLVSS 315
D RL WN W + +V S
Sbjct: 93 DDRLMWNQDTWKKNKLVVHS 112
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 163 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 276
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 163 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 276
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
++ E + + + L +W+D RLSWN E+G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFG 75
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +1
Query: 76 ECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADL 240
E + T + D L+ YD P + +++N++++ + +E T+ ++
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 241 QMNWIDKRLSWNAGEWGCSTWL 306
+ W D+ L WN ++ TWL
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWL 101
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 31.5 bits (68), Expect = 0.77
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWG 291
L+M W D RL W+ G WG
Sbjct: 77 LEMQWFDYRLMWDPGRWG 94
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 160 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
+VV++ ++L+ ++ E + ++A ++ W D +L W+ E+G
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYG 97
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 270
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 271 WNAGEWGCSTWLVSSATLV 327
WN + T +V +LV
Sbjct: 104 WNPADHSGLTQVVMPRSLV 122
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 172 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 276
L +L+ ++E V ++ +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 130 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 279
YD ++P + L L+ + E V ++ ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 338 RQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASIRTVDSDS 204
+ STS+ ++ S V+ P +P F+ IQ + ++RT+ +DS
Sbjct: 116 KDGSTSLIKEESVVMDPRAPDFRSMDSDIQVAEHNITMRTIKNDS 160
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 338 RQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASIRTVDSDS 204
+ STS+ ++ S V+ P +P F+ IQ + ++RT+ +DS
Sbjct: 116 KDGSTSLIKEESVVMDPRAPDFRSMDSDIQVAEHNITMRTIKNDS 160
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 404 GDTXGAEGVVPGRWLQPRLAVPRQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASI 225
GDT + V G +PR VPR ST D +V ++ FQ S LS+ + SI
Sbjct: 257 GDTSRRDAVEAG--FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLN---PNGSI 311
Query: 224 RTV-DSDSRMLA 192
R DS S +A
Sbjct: 312 RAACDSTSGSVA 323
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 404 GDTXGAEGVVPGRWLQPRLAVPRQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASI 225
GDT + V G +PR VPR ST D +V ++ FQ S LS+ + SI
Sbjct: 26 GDTSRRDAVEAG--FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLN---PNGSI 80
Query: 224 RTV-DSDSRMLA 192
R DS S +A
Sbjct: 81 RAACDSTSGSVA 92
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 404 GDTXGAEGVVPGRWLQPRLAVPRQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASI 225
GDT + V G +PR VPR ST D +V ++ FQ S LS+ + SI
Sbjct: 24 GDTSRRDAVEAG--FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLN---PNGSI 78
Query: 224 RTV-DSDSRMLA 192
R DS S +A
Sbjct: 79 RAACDSTSGSVA 90
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 404 GDTXGAEGVVPGRWLQPRLAVPRQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASI 225
GDT + V G +PR VPR ST D +V ++ FQ S LS+ + SI
Sbjct: 82 GDTSRRDAVEAG--FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLN---PNGSI 136
Query: 224 RTV-DSDSRMLA 192
R DS S +A
Sbjct: 137 RAACDSTSGSVA 148
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 404 GDTXGAEGVVPGRWLQPRLAVPRQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASI 225
GDT + V G +PR VPR ST D +V ++ FQ S LS+ + SI
Sbjct: 257 GDTSRRDAVEAG--FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLN---PNGSI 311
Query: 224 RTV-DSDSRMLA 192
R DS S +A
Sbjct: 312 RAACDSTSGSVA 323
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 404 GDTXGAEGVVPGRWLQPRLAVPRQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASI 225
GDT + V G +PR VPR ST D +V ++ FQ S LS+ + SI
Sbjct: 26 GDTSRRDAVEAG--FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLN---PNGSI 80
Query: 224 RTV-DSDSRMLA 192
R DS S +A
Sbjct: 81 RAACDSTSGSVA 92
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 404 GDTXGAEGVVPGRWLQPRLAVPRQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASI 225
GDT + V G +PR VPR ST D +V ++ FQ S LS+ + SI
Sbjct: 24 GDTSRRDAVEAG--FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLN---PNGSI 78
Query: 224 RTV-DSDSRMLA 192
R DS S +A
Sbjct: 79 RAACDSTSGSVA 90
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2
Query: 404 GDTXGAEGVVPGRWLQPRLAVPRQASTSVAEDTSQVLQPHSPAFQLSRLSIQFI*RSASI 225
GDT + V G +PR VPR ST D +V ++ FQ S LS+ + SI
Sbjct: 82 GDTSRRDAVEAG--FEPRDTVPRCHSTQSLRDVQRVRSYNNSQFQASDLSLN---PNGSI 136
Query: 224 RTV-DSDSRMLA 192
R DS S +A
Sbjct: 137 RAACDSTSGSVA 148
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRESES 216
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 217 TVRILADLQMNWIDKRLSWNAGEWG 291
V + A L W D L W+ E+G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEW 288
L +NW+D RLSWN W
Sbjct: 165 LNINWMDPRLSWNESLW 181
Score = 27.9 bits (59), Expect = 9.5
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 305 WCPRQRLWRPDVVLLNAA 358
+ P R+W+PD++L+N A
Sbjct: 188 YIPHARIWKPDIILVNNA 205
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRESES 216
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 217 TVRILADLQMNWIDKRLSWNAGEWG 291
V + A L W D L W+ E+G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical
protein H24G06.1e protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 331 PPQALPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVSARWTR 209
PP PRT ++ S P RSNS + + + E P S +R
Sbjct: 31 PPPLAPRTTSRVLSTAPRRSNSNLFAATNLEVPPTSTNLSR 71
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRESES 216
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 217 TVRILADLQMNWIDKRLSWNAGEWG 291
V + A L W D L W+ E+G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRESES 216
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 217 TVRILADLQMNWIDKRLSWNAGEWG 291
V + A L W D L W+ E+G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +1
Query: 76 ECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLH-LRHANIRESESTVRILADL 240
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 241 QMNWIDKRLSWNAGEWGCSTWL 306
+ W D+ L WN ++ TWL
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWL 101
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 166 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSATL 324
VN+ L + H + E E T + + WID+ + W+A + + +S+ +L
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSL 107
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEW 288
LH+ H + I++ + +++ W+D+RL WN +
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNY 99
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEW 288
L+++W D+RL WN EW
Sbjct: 107 LKLSWKDRRLRWNPEEW 123
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEW 288
L+++W D+RL WN EW
Sbjct: 107 LKLSWKDRRLRWNPEEW 123
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +1
Query: 130 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
Y+ +P V+L +L+ + E E V ++ ++ W D R++W++ +G
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYG 116
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 172 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 288
L L+ + E + V ++ ++ W D RL+WN ++
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDY 116
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 76 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 249
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 250 -WIDKRLSW 273
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 271 WNAGEWG 291
W+ E+G
Sbjct: 90 WDPVEYG 96
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 270
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 271 WNAGEWG 291
W+ E+G
Sbjct: 90 WDPVEYG 96
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 166 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSATL 324
V + L++ H + E E T + L +W D+ L W ST ++S+ L
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKL 107
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 112 DSLLATYDRESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEW 288
+ +L D P + + + L L H + + E + + ++ W D+RL W+ +
Sbjct: 39 EDVLGPLDGSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHY 98
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
N+ E ++ L M W D +L+WN E+G
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYG 130
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEWG 291
N+ E ++ L M W D +L+WN E+G
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYG 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,405,230
Number of Sequences: 27780
Number of extensions: 219285
Number of successful extensions: 798
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -