Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_G02
(889 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.018
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.072
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.22
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.51
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.67
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 2.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.6
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 8.2
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.5 bits (83), Expect = 0.003
Identities = 27/85 (31%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
Frame = -3
Query: 713 GRSXGG-GXAGXGAGXXXXGXGAXXRXXGXGXLGXXGGXXGXRAGLGGXXGGXRWXRXGX 537
G + GG G G G+G G G G G G G G G GG GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFG---GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF 240
Query: 536 GLXXGXGGRRXGXXXXXPXXXGXPP 462
G G G G P G P
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 699 GGXGXXWGGXGXXGXWGGXXGXGXGXPXPXRXGXGXAGGXG 577
G G G G G +GG G G P G G GG G
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Frame = +1
Query: 367 GXXPPPPXGGGGXXXVXXX-RHXXGXGXXAGXXGGLPXXXGXXXXXP 504
G PP P G GG H G G G GG G P
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.7 bits (76), Expect = 0.018
Identities = 19/65 (29%), Positives = 22/65 (33%)
Frame = +2
Query: 506 PGARPXRXPDXXQXAXTXXRXGAPPXPPAXPXPXRSGXGXPXPXPXXPPXXPXXPXPPQX 685
P + P P + APP PP+ P G P P PP P P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP-AAPPLPPAAPAPPPAPAP 482
Query: 686 XPXPP 700
P P
Sbjct: 483 APAAP 487
Score = 33.1 bits (72), Expect = 0.054
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Frame = +2
Query: 542 QXAXTXXRXGAPPXPPAXPX---PXR-SGXGXPXPXPXXPPXXPXXPXPPQXXPXP 697
+ A T APP PP+ P P R P P P PP PP P P
Sbjct: 219 ESAGTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 32.3 bits (70), Expect = 0.095
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +1
Query: 502 PXRRPPXPXXRPXPXRXHRXPPXXPPXPARXPXXPPXXPRXPXPXXLXXAPXP 660
P P P P P PP PA P PP P P P AP P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP-APAPAP 484
Score = 29.9 bits (64), Expect = 0.51
Identities = 29/128 (22%), Positives = 33/128 (25%)
Frame = +3
Query: 501 PXPAPAXXGXQTXPXAPPPXPAXXPPQXRPXAXXPXXXAXASPXLXPXXRPXPXSXXSRP 680
P P P T PPP + P A P ++P L P S P
Sbjct: 361 PPPPPPRSAPSTG-RQPPPLSSSRAVS-NPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Query: 681 XPXXXPPXGSAXRGXGXAPXXXRXXPXXXXAARSXDXXXXXXXXXXXXRXXSPPXPXXPR 860
P PP P P AA +PP P
Sbjct: 419 TPPSLPPSAP----PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 861 GXPPPPXP 884
PP P P
Sbjct: 475 APPPAPAP 482
Score = 27.9 bits (59), Expect = 2.0
Identities = 26/103 (25%), Positives = 27/103 (26%), Gaps = 2/103 (1%)
Frame = +2
Query: 587 PAXPXPXRSGXGXPXPXPXXPPXXPXXPXPPQXXPXPPXRIGXAGXXXRAXXXPXXPXXX 766
P P P RS P P P P PP R RA P P
Sbjct: 337 PPPPPPPRSNAAGSIPLP--PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPA 394
Query: 767 XXGSXRXXAWRGPXPXRSXXPXXPXXPXXXAXXPP--XPXTPP 889
G R+ P P P PP P PP
Sbjct: 395 IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +1
Query: 514 PPXPXXRPXPXRXHRXPPXXPPXPARXPXXPPXXPRXPXPXXLXXAPXP 660
PP P P P PP P P PP P A P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAELP 495
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.072
Identities = 31/117 (26%), Positives = 39/117 (33%), Gaps = 4/117 (3%)
Frame = +3
Query: 546 APP-PXPAXXPPQXRPXAXXPXXXAXASPXLXPXXRPXPXS-XXSRPXPXXXPPXGSAXR 719
APP P P+ PP P + P + + P P P S S P P PP A
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV-PAPS 1089
Query: 720 GXGXAPXXXRXXPXXXXAARSXDXXXXXXXXXXXXR--XXSPPXPXXPRGXPPPPXP 884
G P P + + + +PP P P G PP P P
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP-VPSGAPPVPKP 1145
Score = 29.1 bits (62), Expect = 0.88
Identities = 31/135 (22%), Positives = 36/135 (26%), Gaps = 7/135 (5%)
Frame = +3
Query: 501 PXPAPA----XXGXQTXPXAPP-PXPAXXPPQXRPXAXXPXXXAXASPXLXPXXRPXPXS 665
P P PA APP P P+ PP +P P P + P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAP---PVPKPSVAVPPVPAPSG 1119
Query: 666 XXSRPXPXXXPPXGSAXRGXGXAPXXXRXXPXXXXAARSXDXXXXXXXXXXXXRXXS--P 839
P P P G P P + + S P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Query: 840 PXPXXPRGXPPPPXP 884
P P G PP P P
Sbjct: 1180 PVPKPAAGVPPVPPP 1194
Score = 29.1 bits (62), Expect = 0.88
Identities = 30/131 (22%), Positives = 38/131 (29%), Gaps = 3/131 (2%)
Frame = +3
Query: 501 PXPAPAXXGXQTXPX--APP-PXPAXXPPQXRPXAXXPXXXAXASPXLXPXXRPXPXSXX 671
P PAP+ P APP P P+ PP +P P A + P +P +
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP--PVPKPSVAAPP 1170
Query: 672 SRPXPXXXPPXGSAXRGXGXAPXXXRXXPXXXXAARSXDXXXXXXXXXXXXRXXSPPXPX 851
PP G P P + +PP P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV---------GVPPVPPPSTAPPVPT 1221
Query: 852 XPRGXPPPPXP 884
G PP P P
Sbjct: 1222 PSAGLPPVPVP 1232
Score = 29.1 bits (62), Expect = 0.88
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Frame = +2
Query: 569 GAPPXPP----AXPXPXRSGXGXPXPXPXXPPXXPXXPXPPQXXPXPPXRIG 712
GAPP P A P P S G P P P P P P + P P +G
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSS-GIP-PVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Frame = +2
Query: 569 GAPPXPPAXPXPXRSGXGXPXP--XPXXPPXXPXXPXPPQXXPXPP 700
GAP PP P P P P P P P P PP
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +2
Query: 569 GAPPXPP---AXPXPXRSGXGXPXPXPXXPPXXPXXPXPPQXXPXP 697
G PP PP A P P S P P P P P P P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +1
Query: 463 GGLPXXXGXXXXXPXRRPPXPXXRPXPXRXHRXPPXXPPXPARXPXXPPXXPRXP 627
GG+P PP P P R P PP P+ P P P P
Sbjct: 107 GGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +1
Query: 502 PXRRPPXPXXRPXPXRXHRXPPXXPPXPARXPXXPPXXPRXPXPXXLXXAP 654
P + PP P P P + P P+ PP P+ P P L AP
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP-PPPLSQAP 210
Score = 30.7 bits (66), Expect = 0.29
Identities = 28/111 (25%), Positives = 35/111 (31%)
Frame = +3
Query: 405 PXRPXPPXPXGXXXPGGXXXXXAXXXXXXXXXPXPAPAXXGXQTXPXAPPPXPAXXPPQX 584
P P PP P P P P+PA P PP P+ PP
Sbjct: 125 PSAPAPPTPQSELRP-------PTSAPPRPSIPPPSPA--SAPPIPSKAPPIPSSLPPPA 175
Query: 585 RPXAXXPXXXAXASPXLXPXXRPXPXSXXSRPXPXXXPPXGSAXRGXGXAP 737
+P A P ++P L P P P P ++ R AP
Sbjct: 176 QPAA--PVKSPPSAPSLPSAVPPMPPKVPPPPL-SQAPVANTSSRPSSFAP 223
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +2
Query: 572 APPXPPAXPXPXRSGXGXPXPXPXXPPXXPXXPXPPQXXPXPP 700
APP P + P P + P P P P P P PP
Sbjct: 164 APPIPSSLPPPAQPAAPVKSP-PSAPSLPSAVPPMPPKVPPPP 205
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.9 bits (64), Expect = 0.51
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +2
Query: 575 PPXPPAXPXPXRSGXGXPXPXPXXPPXXPXXPXPPQXXPXPPXRIGXAG 721
PP PPA P + P P P PP P PP P PP + AG
Sbjct: 733 PPPPPAVIVPTPA----PAPIP-VPPPAPIMGGPP--PPPPPPGVAGAG 774
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 517 PXPXXRPXPXRXHRXPPXXPPXPARXPXXPPXXPRXP 627
P P P P PP PP P PP P P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 578 PXPPAXPXPXRSGXGXPXPXPXXPPXXPXXPXPP 679
P P P P G P P P P P PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 549 PPPXPAXXPPQXRPXAXXPXXXAXASPXLXPXXRPXPXSXXSRPXPXXXPPXGSAXRGXG 728
PPP PA P P A P P + P P PP SA
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 729 XAP 737
AP
Sbjct: 793 YAP 795
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 837 PPXPXXPRGXPPPPXPP 887
PP P PPPP PP
Sbjct: 765 PPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 467 PPXXPAXXPXPXXXRXXXTXXXPPPPXGGGGXXP 366
P PA P P PPPP G G P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.67
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +2
Query: 575 PPXPPAXPXPXRSGXGXPXPXP---XXPPXXPXXPXPPQXXPXPP 700
PP P P + P P P PP P P P P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 575 PPXPPAXPXPXRSGXGXPXPXPXXPPXXPXXPXPPQXXPXPP 700
PP PP P S P P PP P P P P P
Sbjct: 1707 PPPPPMSVPPPPSAP----PMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 502 PXRRPPXPXXRPXPXRXHRXPPXXPPXPARXPXXPP 609
P P P P P PP PP PA P PP
Sbjct: 1700 PQMSAPTP---PPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 834 SPPXPXXPRGXPPPPXP 884
+PP P P PPPP P
Sbjct: 1720 APPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 552 PPXPAXXPPQXRPXAXXPXXXAXASPXLXPXXRPXPXSXXSRP-XPXXXPP 701
P P PP RP + P + +P P P P S P P PP
Sbjct: 1683 PAHPVSTPP-VRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 25.8 bits (54), Expect = 8.2
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Frame = +2
Query: 518 PXRXPDXXQXAXTXXRXGAPPXPPAXPXPXRSGXGXPXPXPXXPPXXPXXPXP---PQXX 688
P P A + AP P P S P P PP P P P P
Sbjct: 1444 PQVVPPAPMHAVAPVQPKAPGMVTNAPAPS-SAPAPPAPVSQLPPAVPNVPVPSMIPSVA 1502
Query: 689 PXPPXRIGXA 718
PP + A
Sbjct: 1503 QQPPSSVAPA 1512
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = +3
Query: 540 PXAPPPXPAXXPPQXRPXAXXPXXXAXASPXLXPXXRPXPXSXXSRPXPXXXPPXGSAXR 719
P PPP P PPQ + P + P P + S+P PP ++ R
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP---PRPPTNASTR 292
Query: 720 GXG 728
G
Sbjct: 293 STG 295
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 2.7
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 9/52 (17%)
Frame = -2
Query: 699 GGXGXXWGGXGXXGXW-GGXXGXGXGXPXPXRXGXGXA--------GGXGGA 571
GG G GG G G GG G G G R G G A GG GGA
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 514 PPXPXXRPXPXRXHRXPPXXPPXPARXPXXPPXXPRXPXPXXLXXAP 654
PP P P PP PP A P P P P + P
Sbjct: 506 PPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIP 552
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 834 SPPXPXXPRGXPPPPXPP 887
+PP P P G PP PP
Sbjct: 8 NPPPPPPPPGFEPPSQPP 25
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 837 PPXPXXPRGXPPPPXPP 887
PP P PPPP PP
Sbjct: 14 PPPGFEPPSQPPPPPPP 30
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,932,921
Number of Sequences: 5004
Number of extensions: 28270
Number of successful extensions: 286
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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