Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_F21
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 82 4e-16
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.008
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.008
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.008
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 35 0.071
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 35 0.071
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 35 0.071
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.12
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.16
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.16
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.16
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.16
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 32 0.38
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 32 0.38
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 31 0.66
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 0.88
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 0.88
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 1.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.0
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 2.7
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 2.7
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 2.7
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 2.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 6.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 6.2
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 82.2 bits (194), Expect = 4e-16
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = +1
Query: 64 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKXXX 243
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEK
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 244 XXXXXXXIXNP 276
+ NP
Sbjct: 61 AARAIAAVENP 71
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 341 TGATPIXGRFHPGAFINQIQXXFRETPFLIVLDP 442
TGAT I GRF PG NQIQ F+E L++ DP
Sbjct: 94 TGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDP 127
Score = 31.1 bits (67), Expect = 0.88
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 273 PADVFVISSRXFGXRAVLKFA 335
PADV V+S+R + RA+LKFA
Sbjct: 71 PADVVVVSARPYAQRALLKFA 91
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.008
Identities = 31/102 (30%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 444 PKPXPLXEXPMSTSREXLGXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPX 623
P P P P++ S G PP G P + PP P G SP
Sbjct: 239 PPPPPKGSPPLAGS----GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG----SPP 290
Query: 624 PPXGXXGEXXXPPPPX-KXXXGXXXPRXXGGXPPXXKXXXPP 746
PP G PPPP G P GG PP PP
Sbjct: 291 PPRA--GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = +3
Query: 531 GFPXKQIFPPXGLNXGXXPXKXXGXXXXSPXPPXGXXGEXXXPP---PPXKXXXGXXXPR 701
GF K+ PP G P K S PP PP P G P
Sbjct: 224 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Query: 702 XXGGXPPXXKXXXPP 746
GG PP + PP
Sbjct: 284 PAGGSPPPPRAGSPP 298
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 5/62 (8%)
Frame = +1
Query: 577 GXXPXXXXGXGXXPPX---PPXXXGGXXXPPPPPX--KXXGGXXXPGXXGGXPXXXXXXP 741
G P G PP PP G PPPPP G P G P P
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
Query: 742 XP 747
P
Sbjct: 330 PP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.008
Identities = 31/102 (30%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 444 PKPXPLXEXPMSTSREXLGXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPX 623
P P P P++ S G PP G P + PP P G SP
Sbjct: 260 PPPPPKGSPPLAGS----GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG----SPP 311
Query: 624 PPXGXXGEXXXPPPPX-KXXXGXXXPRXXGGXPPXXKXXXPP 746
PP G PPPP G P GG PP PP
Sbjct: 312 PPRA--GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = +3
Query: 531 GFPXKQIFPPXGLNXGXXPXKXXGXXXXSPXPPXGXXGEXXXPP---PPXKXXXGXXXPR 701
GF K+ PP G P K S PP PP P G P
Sbjct: 245 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Query: 702 XXGGXPPXXKXXXPP 746
GG PP + PP
Sbjct: 305 PAGGSPPPPRAGSPP 319
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 5/62 (8%)
Frame = +1
Query: 577 GXXPXXXXGXGXXPPX---PPXXXGGXXXPPPPPX--KXXGGXXXPGXXGGXPXXXXXXP 741
G P G PP PP G PPPPP G P G P P
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
Query: 742 XP 747
P
Sbjct: 351 PP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.008
Identities = 31/102 (30%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 444 PKPXPLXEXPMSTSREXLGXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPX 623
P P P P++ S G PP G P + PP P G SP
Sbjct: 245 PPPPPKGSPPLAGS----GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG----SPP 296
Query: 624 PPXGXXGEXXXPPPPX-KXXXGXXXPRXXGGXPPXXKXXXPP 746
PP G PPPP G P GG PP PP
Sbjct: 297 PPRA--GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = +3
Query: 531 GFPXKQIFPPXGLNXGXXPXKXXGXXXXSPXPPXGXXGEXXXPP---PPXKXXXGXXXPR 701
GF K+ PP G P K S PP PP P G P
Sbjct: 230 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Query: 702 XXGGXPPXXKXXXPP 746
GG PP + PP
Sbjct: 290 PAGGSPPPPRAGSPP 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 5/62 (8%)
Frame = +1
Query: 577 GXXPXXXXGXGXXPPX---PPXXXGGXXXPPPPPX--KXXGGXXXPGXXGGXPXXXXXXP 741
G P G PP PP G PPPPP G P G P P
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
Query: 742 XP 747
P
Sbjct: 336 PP 337
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 574 GGXXPXXXXGXGXXPPXPPXXXGGXXXPPPPP 669
GG P G PP PP G PPPPP
Sbjct: 223 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 574 GGXXPXXXXGXGXXPPXPPXXXGGXXXPPPPP 669
GG P G PP PP G PPPPP
Sbjct: 209 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 574 GGXXPXXXXGXGXXPPXPPXXXGGXXXPPPPP 669
GG P G PP PP G PPPPP
Sbjct: 209 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -2
Query: 710 PXXPGXXXPPXXFXGGGGGXXFPPXXXGGXGGXXPXPXXF--XGXXPP-I*XXXGENLFS 540
P PG PP GG GG F P GG G P P F G PP G N F+
Sbjct: 417 PGAPGSYGPPQ---GGPGG--FGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFA 471
Query: 539 XEPNSXNFR 513
P++ +R
Sbjct: 472 RGPSATGYR 480
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 710 PXXPGXXXPPXXFXGGGGGXXFPPXXXGGXGGXXPXPXXFXGXXPP 573
P PG PP G G PP GG GG P P G P
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPP--QGGPGGFGPPPPGGPGAYGP 446
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 574 GGXXPXXXXGXGXXPPXPPXXXGGXXXPPPPPXKXXGGXXXPGXXGGXPXXXXXXP 741
GG P G P P G PPP G PG G P P
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAP 420
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 574 GGXXPXXXXGXGXXPPXPPXXXGGXXXPPPPP 669
GG P G PP PP GG PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +1
Query: 607 GXXPPXP--PXXXGGXXXPPPPP--XKXXGGXXXPGXXGGXPXXXXXXPXP 747
G PP P P GG PPPP GG P GG P P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPPX--KXXGGXXXPGXXG 711
PP PP GG PPPPP GG P G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 607 GXXPPXPPXXXGGXXXPPPPPXKXXGGXXXP 699
G PP PP G PPPPP G P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 536 PXKTNFPPXXXKXGXXXPKXXGXXGVFPXXPPGXXGGXXXPPPPP 670
P PP P G P PPG G PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +3
Query: 498 GXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPXPPXGXXGEXXXPPPPXKX 677
G PP G G P PP G P G P PP G PPPP
Sbjct: 724 GGPPPPPPPG-GLPPITGGPPPPPPPGGLPPISGGPPP--PPPPPGGCPPPPPPPPPGGF 780
Query: 678 XXGXXXPRXXGGXPP 722
G P G P
Sbjct: 781 KGGPPPPPPPGMFAP 795
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 607 GXXPPXPPXXXGGXXXPPPPPXKXXGGXXXP 699
G PP PP PPPP GG P
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 574 GGXXPXXXXGXGXXPPXPPXXXGGXXXPPPPP 669
GG P G PP PP GG PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +1
Query: 607 GXXPPXP--PXXXGGXXXPPPPP--XKXXGGXXXPGXXGGXPXXXXXXPXP 747
G PP P P GG PPPP GG P GG P P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPPX--KXXGGXXXPGXXG 711
PP PP GG PPPPP GG P G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 607 GXXPPXPPXXXGGXXXPPPPPXKXXGGXXXP 699
G PP PP G PPPPP G P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 536 PXKTNFPPXXXKXGXXXPKXXGXXGVFPXXPPGXXGGXXXPPPPP 670
P PP P G P PPG G PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +3
Query: 498 GXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPXPPXGXXGEXXXPPPPXKX 677
G PP G G P PP G P G P PP G PPPP
Sbjct: 724 GGPPPPPPPG-GLPPITGGPPPPPPPGGLPPISGGPPP--PPPPPGGCPPPPPPPPPGGF 780
Query: 678 XXGXXXPRXXGGXPP 722
G P G P
Sbjct: 781 KGGPPPPPPPGMFAP 795
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 607 GXXPPXPPXXXGGXXXPPPPPXKXXGGXXXP 699
G PP PP PPPP GG P
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 574 GGXXPXXXXGXGXXPPXPPXXXGGXXXPPPPP 669
GG P G PP PP GG PPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +1
Query: 607 GXXPPXP--PXXXGGXXXPPPPP--XKXXGGXXXPGXXGGXPXXXXXXPXP 747
G PP P P GG PPPP GG P GG P P P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPPX--KXXGGXXXPGXXG 711
PP PP GG PPPPP GG P G
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 607 GXXPPXPPXXXGGXXXPPPPPXKXXGGXXXP 699
G PP PP G PPPPP G P
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 536 PXKTNFPPXXXKXGXXXPKXXGXXGVFPXXPPGXXGGXXXPPPPP 670
P PP P G P PPG G PPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +3
Query: 498 GXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPXPPXGXXGEXXXPPPPXKX 677
G PP G G P PP G P G P PP G PPPP
Sbjct: 307 GGPPPPPPPG-GLPPITGGPPPPPPPGGLPPISGGPPP--PPPPPGGCPPPPPPPPPGGF 363
Query: 678 XXGXXXPRXXGGXPP 722
G P G P
Sbjct: 364 KGGPPPPPPPGMFAP 378
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 607 GXXPPXPPXXXGGXXXPPPPPXKXXGGXXXP 699
G PP PP PPPP GG P
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 586 PXXXXGXGXXPPXPPXXXGGXXXPPPPPXKXXG 684
P G PP PP GG PPPPP G
Sbjct: 569 PQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPPXKXXGGXXXPGXXGG 714
PP P G PPPPP G P GG
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPPXKXXGGXXXP 699
PP P G PPPPP GG P
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +1
Query: 601 GXGXXPPXPPXXXGGXXXPPPPPXKXXGGXXXPGXXGGXP 720
G G PP PP GG PPPPP GG P G P
Sbjct: 79 GPGGIPPPPPMFAGG--IPPPPP--MMGGIPPPPPMFGAP 114
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 544 NKFSPXXX*XGGXXPXXXXGXGXXPPXPPXXXGGXXXPPPPP 669
N F P GG P G PP PP G PPPPP
Sbjct: 71 NGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG---IPPPPP 109
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -2
Query: 713 PPXXPGXXXPPXXFXGGGGGXXFPPXXXGGXGGXXPXPXXFXGXXPP 573
PP PG PP GG PP GG P P F PP
Sbjct: 76 PPPGPGGIPPPPPMFAGG----IPPPPP-MMGGIPPPPPMFGAPPPP 117
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPPXKXXGG 687
PP PP GG PPPPP G
Sbjct: 41 PPPPPPCGGGYEAPPPPPPPSYAG 64
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPPXKXXGGXXXPG 702
PP PP G PPPPP GG G
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGGPSYAG 70
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 554 PPXXXKXGXXXPKXXGXXGVFPXXPPGXXGGXXXPPPPP 670
PP G P+ G +P P G G PPPPP
Sbjct: 178 PPVYPPFGQPAPQMSGQRMPYPYPPQGMPGYPGGPPPPP 216
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 537 PXKQIFPPXGLNXGXXPXKXXGXXXXSPXPPXGXXGEXXXPPPPXKXXXGXXXP 698
P Q PP G + G P PP G G PPPP G P
Sbjct: 172 PNGQAPPPVYPPFGQPAPQMSGQRMPYPYPPQGMPGYPGGPPPPPHGYEGYPPP 225
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = -2
Query: 713 PPXXPGXXXPPXXFXGGGGGXXFPPXXXGG-XGGXXPXPXXFXGXXPP 573
PP P P G +PP G GG P P + G PP
Sbjct: 178 PPVYPPFGQPAPQMSGQRMPYPYPPQGMPGYPGGPPPPPHGYEGYPPP 225
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 601 GXGXXPPXPPXXXGGXXXPPPPP 669
G G PP PP G PPPPP
Sbjct: 44 GGGFGPPPPPFGPVGYALPPPPP 66
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.1 bits (67), Expect = 0.88
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 617 PXXPPGXXGGXXXPPPPP 670
P PPG GG PPPPP
Sbjct: 662 PVPPPGGLGGFMPPPPPP 679
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 600 GXXXXSPXPPXGXXGEXXXPPPPXKXXXGXXXPRXXGGXPP 722
G P PP G G PPPP G PP
Sbjct: 656 GSSMPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPP 696
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.1 bits (67), Expect = 0.88
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 617 PXXPPGXXGGXXXPPPPP 670
P PPG GG PPPPP
Sbjct: 662 PVPPPGGLGGFMPPPPPP 679
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 600 GXXXXSPXPPXGXXGEXXXPPPPXKXXXGXXXPRXXGGXPP 722
G P PP G G PPPP G PP
Sbjct: 656 GSSMPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPP 696
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 601 GXGXXPPXPPXXXGGXXXPPPPPXKXXGGXXXPGXXGGXPXXXXXXP 741
G PP PP PPPPP + G PG P P
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 554 PPXXXKXGXXXPKXXGXXGVFPXXPPGXXGGXXXPPPPP 670
PP P G+ P PP G PPPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 302
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = +1
Query: 577 GXXPXXXXGXGXXPPXPPXXXG-----GXXXPPPPPXKXXGGXXXP 699
G P G PP PP G G PPPP + GG P
Sbjct: 305 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/87 (27%), Positives = 28/87 (32%), Gaps = 10/87 (11%)
Frame = +2
Query: 440 PAKTXTPXGXSXVHXPGXXGXTKXP*NXGNWVPX------KTNFPPXXXKXGXXXPKXX- 598
P + TP PG P + G W P +T PP P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 325
Query: 599 ---GXXGVFPXXPPGXXGGXXXPPPPP 670
G G+ P PPG PPPPP
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGGMPPPPP 352
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +3
Query: 555 PPXGLNXGXXPXKXXGXXXXSPXPPXGXX----GEXXXPPPPXKXXXGXXXPRXXGGXPP 722
P G+ P G P PP G G PPPP G P GG PP
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPP 335
Score = 27.9 bits (59), Expect = 8.2
Identities = 27/108 (25%), Positives = 32/108 (29%), Gaps = 6/108 (5%)
Frame = +1
Query: 370 PPRCFY*PNPXXXPXNPXLDCXGPGQNLXPXWXLXCPXPGXXWAXKXPLKFXELGSXENK 549
PP P P P P + P W P P + ++
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 550 FSPXXX*XGGXXPXXXXGX----GXXPPXPPXXX--GGXXXPPPPPXK 675
F P GG P G G PP PP G PPPPP +
Sbjct: 325 FGPPGM--GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/75 (25%), Positives = 22/75 (29%)
Frame = +3
Query: 444 PKPXPLXEXPMSTSREXLGXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPX 623
P P P P +G PP G+ +P PP P P
Sbjct: 317 PPPPP----PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Query: 624 PPXGXXGEXXXPPPP 668
P G PPPP
Sbjct: 373 APPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 601 GXGXXPPXPPXXXGGXXXPPPPPXKXXGGXXXPGXXGGXPXXXXXXP 741
G PP PP PPPPP + G PG P P
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 554 PPXXXKXGXXXPKXXGXXGVFPXXPPGXXGGXXXPPPPP 670
PP P G+ P PP G PPPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 312
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = +1
Query: 577 GXXPXXXXGXGXXPPXPPXXXG-----GXXXPPPPPXKXXGGXXXP 699
G P G PP PP G G PPPP + GG P
Sbjct: 315 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/87 (27%), Positives = 28/87 (32%), Gaps = 10/87 (11%)
Frame = +2
Query: 440 PAKTXTPXGXSXVHXPGXXGXTKXP*NXGNWVPX------KTNFPPXXXKXGXXXPKXX- 598
P + TP PG P + G W P +T PP P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 335
Query: 599 ---GXXGVFPXXPPGXXGGXXXPPPPP 670
G G+ P PPG PPPPP
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +3
Query: 555 PPXGLNXGXXPXKXXGXXXXSPXPPXGXX----GEXXXPPPPXKXXXGXXXPRXXGGXPP 722
P G+ P G P PP G G PPPP G P GG PP
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPP 345
Score = 27.9 bits (59), Expect = 8.2
Identities = 27/108 (25%), Positives = 32/108 (29%), Gaps = 6/108 (5%)
Frame = +1
Query: 370 PPRCFY*PNPXXXPXNPXLDCXGPGQNLXPXWXLXCPXPGXXWAXKXPLKFXELGSXENK 549
PP P P P P + P W P P + ++
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 550 FSPXXX*XGGXXPXXXXGX----GXXPPXPPXXX--GGXXXPPPPPXK 675
F P GG P G G PP PP G PPPPP +
Sbjct: 335 FGPPGM--GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/75 (25%), Positives = 22/75 (29%)
Frame = +3
Query: 444 PKPXPLXEXPMSTSREXLGXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPX 623
P P P P +G PP G+ +P PP P P
Sbjct: 327 PPPPP----PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Query: 624 PPXGXXGEXXXPPPP 668
P G PPPP
Sbjct: 383 APPSGHGMIPPPPPP 397
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/116 (27%), Positives = 35/116 (30%), Gaps = 6/116 (5%)
Frame = +1
Query: 391 PNPXXXPXN--PXLDCXGPGQNLXPXWXLXCPXPGXXWAXKXPLKFXELGSXENKFSPXX 564
P P P P + P P + P PG P +G NK P
Sbjct: 689 PRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGV--GPPPPQGIPPMGFDPNKPPPPM 746
Query: 565 X*XG----GXXPXXXXGXGXXPPXPPXXXGGXXXPPPPPXKXXGGXXXPGXXGGXP 720
G P G G PP GG PPPP GG G GG P
Sbjct: 747 FQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPP-SFRGGR---GGHGGPP 798
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/75 (29%), Positives = 25/75 (33%)
Frame = +3
Query: 444 PKPXPLXEXPMSTSREXLGXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPX 623
P P P E ++ + PP G G P PP G P G S
Sbjct: 199 PPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTP---PPTG-----EPQDLSGEGNASRR 250
Query: 624 PPXGXXGEXXXPPPP 668
PP G PPPP
Sbjct: 251 PPPPPKGTGSPPPPP 265
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +3
Query: 444 PKPXPLXEXPMSTSREXLGXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSPX 623
P P P E + + PP G G P PP G P G S
Sbjct: 106 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPP---PPTG-----EPQDLSGEGNASRR 157
Query: 624 PPXGXXGEXXXPPPP 668
PP G PPPP
Sbjct: 158 PPPPPKGTGSPPPPP 172
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/76 (30%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = +3
Query: 444 PKPXPLXEXP-MSTSREXLGXQXPPKIXGIGFPXKQIFPPXGLNXGXXPXKXXGXXXXSP 620
P P P E +S + PP G G P PP G P G S
Sbjct: 74 PPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPP---PPTG-----EPQDLSGEGNASR 125
Query: 621 XPPXGXXGEXXXPPPP 668
PP G PPPP
Sbjct: 126 RPPPPPKGTGSPPPPP 141
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +1
Query: 619 PXPPXXXGGXXXPPPPP--XKXXGGXXXPGXXGG 714
P PP G PPPPP GG PG G
Sbjct: 56 PRPPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAG 89
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 719 GXPPXXPGXXXPPXXFXGGGGGXXFPPXXXGG 624
G PP P PP F G GGG +P GG
Sbjct: 63 GAPPPPP----PPPAFGGLGGGAAYPGAGAGG 90
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +1
Query: 619 PXPPXXXGGXXXPPPPP--XKXXGGXXXPGXXGG 714
P PP G PPPPP GG PG G
Sbjct: 56 PRPPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAG 89
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 719 GXPPXXPGXXXPPXXFXGGGGGXXFPPXXXGG 624
G PP P PP F G GGG +P GG
Sbjct: 63 GAPPPPP----PPPAFGGLGGGAAYPGAGAGG 90
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +1
Query: 619 PXPPXXXGGXXXPPPPP--XKXXGGXXXPGXXGG 714
P PP G PPPPP GG PG G
Sbjct: 56 PRPPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAG 89
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 719 GXPPXXPGXXXPPXXFXGGGGGXXFPPXXXGG 624
G PP P PP F G GGG +P GG
Sbjct: 63 GAPPPPP----PPPAFGGLGGGAAYPGAGAGG 90
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 669 GGGGGXXXPPXXPGGXXGXTPXXP 598
GG GG PP PGG G P P
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGP 642
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 669 GGGGGXXXPPXXPGGXXGXTPXXP 598
GG GG PP PGG G P P
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGP 642
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPP 669
PP PP G PPPPP
Sbjct: 798 PPLPPISSGAPPPPPPPP 815
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPPXKXXGG 687
PP PP PPPPP GG
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPP 669
PP PP G PPPPP
Sbjct: 798 PPLPPISSGAPPPPPPPP 815
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 616 PPXPPXXXGGXXXPPPPPXKXXGG 687
PP PP PPPPP GG
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGG 818
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -2
Query: 719 GXPPXXPGXXXPPXXFXGGGGGXXFPPXXXGGXGGXXPXP 600
G PP PG PP GGGG +PP G P P
Sbjct: 788 GAPPP-PGMRPPPGA--PGGGGGMYPPLIPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -2
Query: 719 GXPPXXPGXXXPPXXFXGGGGGXXFPPXXXGGXGGXXPXP 600
G PP PG PP GGGG +PP G P P
Sbjct: 788 GAPPP-PGMRPPPGA--PGGGGGMYPPLIPTRPGPGGPPP 824
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 668 GGGGGXXFPPXXXGGXGG 615
GGGGG PP GG GG
Sbjct: 266 GGGGGYPQPPPQQGGGGG 283
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Frame = +2
Query: 440 PAKTXTPXGXSXVHXPGXXGXTKXP*NXGNWVPXKTNFPPXXXKXGXXXPKXXGXXG-VF 616
P P PG G P G VP + PP P G G
Sbjct: 111 PGVAGNPGKPGKPGKPGAPGNPGAP-GKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAG 169
Query: 617 PXXPPGXXGGXXXPPPP 667
P P G G P PP
Sbjct: 170 PAGPDGEAGSPAAPSPP 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,909,661
Number of Sequences: 27780
Number of extensions: 359343
Number of successful extensions: 1770
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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