Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_F16
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 41 0.001
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 41 0.001
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 41 0.001
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.12
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.20
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.20
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.20
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.26
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.26
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.1
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 2.4
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 2.4
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 2.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.4
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.2
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 29 4.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.2
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 4.2
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 4.2
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 4.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.2
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 4.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 5.6
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 5.6
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 28 7.4
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 7.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 7.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.4
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 7.4
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 7.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 7.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 7.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 7.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 7.4
U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical p... 24 9.7
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 9.8
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 28 9.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 9.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +3
Query: 507 GGRPXFXXXXGAXPXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAP 683
GG P G P GG PPPPPP PPP P G P AP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 507 GGRPXFXXXXGAXPXXGGXPPPPPPXXKK--XQXPPPXPXXXGXGXXXPXXXXXXXXXXA 680
GG P G P GG PPPPPP PPP P G P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 681 PP 686
PP
Sbjct: 784 PP 785
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = -3
Query: 573 GGGXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXKKXXFXXXTX*XKXPPXP 394
GG PPP G PP G PPPPP PP P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP-------PPPPPPP 776
Query: 393 XGG--GGPP 373
GG GGPP
Sbjct: 777 PGGFKGGPP 785
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +2
Query: 545 PXXGGGXPPPPPXXKKXXXPPPXXXXXRGXXXXXXXXXXXXXGXXPAXXXXXXPPXPXPX 724
P GG PPPP PPP G P PP P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 725 GXXPXXXXXP 754
G P P
Sbjct: 767 GCPPPPPPPP 776
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 537 GAXPXXGGXPPPPPPXXKK--XQXPPPXPXXXG 629
G P GG PPPPPP PPP P G
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 31.9 bits (69), Expect = 0.60
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +2
Query: 458 GGGGGXXXGXXXPXXXGGAPXFFXXXXXXPXXGGGXPPPPPXXK----KXXXPPP 610
GG G P GG P P GG PPPPP K PPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +3
Query: 540 AXPXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXPXXP 716
A P G PPPPP PPP P G PP P P
Sbjct: 705 ALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 576 GGGGXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXK 445
GG PPP G PP G P PPPPP K
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGG--CPPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 567 GXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXKKXXFXXXTX*XKXPPXPXG 388
G PPP G PP PPPPP + PP P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP----PGGLPPISGGPPPPPPPPG 766
Query: 387 GGGPP 373
G PP
Sbjct: 767 GCPPP 771
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 467 GGXXXGXXXPXXXGGAPXFFXXXXXXPXXGGGXPPPPP 580
GG P GG P P GG PPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +3
Query: 507 GGRPXFXXXXGAXPXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAP 683
GG P G P GG PPPPPP PPP P G P AP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 507 GGRPXFXXXXGAXPXXGGXPPPPPPXXKK--XQXPPPXPXXXGXGXXXPXXXXXXXXXXA 680
GG P G P GG PPPPPP PPP P G P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 681 PP 686
PP
Sbjct: 784 PP 785
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = -3
Query: 573 GGGXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXKKXXFXXXTX*XKXPPXP 394
GG PPP G PP G PPPPP PP P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP-------PPPPPPP 776
Query: 393 XGG--GGPP 373
GG GGPP
Sbjct: 777 PGGFKGGPP 785
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +2
Query: 545 PXXGGGXPPPPPXXKKXXXPPPXXXXXRGXXXXXXXXXXXXXGXXPAXXXXXXPPXPXPX 724
P GG PPPP PPP G P PP P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 725 GXXPXXXXXP 754
G P P
Sbjct: 767 GCPPPPPPPP 776
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 537 GAXPXXGGXPPPPPPXXKK--XQXPPPXPXXXG 629
G P GG PPPPPP PPP P G
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 31.9 bits (69), Expect = 0.60
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +2
Query: 458 GGGGGXXXGXXXPXXXGGAPXFFXXXXXXPXXGGGXPPPPPXXK----KXXXPPP 610
GG G P GG P P GG PPPPP K PPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +3
Query: 540 AXPXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXPXXP 716
A P G PPPPP PPP P G PP P P
Sbjct: 705 ALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 576 GGGGXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXK 445
GG PPP G PP G P PPPPP K
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGG--CPPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 567 GXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXKKXXFXXXTX*XKXPPXPXG 388
G PPP G PP PPPPP + PP P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP----PGGLPPISGGPPPPPPPPG 766
Query: 387 GGGPP 373
G PP
Sbjct: 767 GCPPP 771
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 467 GGXXXGXXXPXXXGGAPXFFXXXXXXPXXGGGXPPPPP 580
GG P GG P P GG PPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +3
Query: 507 GGRPXFXXXXGAXPXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAP 683
GG P G P GG PPPPPP PPP P G P AP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 507 GGRPXFXXXXGAXPXXGGXPPPPPPXXKK--XQXPPPXPXXXGXGXXXPXXXXXXXXXXA 680
GG P G P GG PPPPPP PPP P G P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 681 PP 686
PP
Sbjct: 367 PP 368
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = -3
Query: 573 GGGXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXKKXXFXXXTX*XKXPPXP 394
GG PPP G PP G PPPPP PP P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP-------PPPPPPP 359
Query: 393 XGG--GGPP 373
GG GGPP
Sbjct: 360 PGGFKGGPP 368
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +2
Query: 545 PXXGGGXPPPPPXXKKXXXPPPXXXXXRGXXXXXXXXXXXXXGXXPAXXXXXXPPXPXPX 724
P GG PPPP PPP G P PP P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 725 GXXPXXXXXP 754
G P P
Sbjct: 350 GCPPPPPPPP 359
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 537 GAXPXXGGXPPPPPPXXKK--XQXPPPXPXXXG 629
G P GG PPPPPP PPP P G
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 31.9 bits (69), Expect = 0.60
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +2
Query: 458 GGGGGXXXGXXXPXXXGGAPXFFXXXXXXPXXGGGXPPPPPXXK----KXXXPPP 610
GG G P GG P P GG PPPPP K PPP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +3
Query: 540 AXPXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXPXXP 716
A P G PPPPP PPP P G PP P P
Sbjct: 288 ALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 576 GGGGXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXK 445
GG PPP G PP G P PPPPP K
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGG--CPPPPPPPPPGGFK 364
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -3
Query: 567 GXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXKKXXFXXXTX*XKXPPXPXG 388
G PPP G PP PPPPP + PP P G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP----PGGLPPISGGPPPPPPPPG 349
Query: 387 GGGPP 373
G PP
Sbjct: 350 GCPPP 354
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 467 GGXXXGXXXPXXXGGAPXFFXXXXXXPXXGGGXPPPPP 580
GG P GG P P GG PPPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP 331
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect(2) = 0.12
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 558 GXPPPPPPXXKKXQXPPPXPXXXG 629
G PPPPPP PPP P G
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPPPG 597
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 555 GGXPPPPPPXXKKXQXPPPXPXXXG 629
G PPPPPP PPP P G
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPPPGG 598
Score = 21.0 bits (42), Expect(2) = 0.12
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 540 AXPXXGGXPPPPP 578
A P PPPPP
Sbjct: 534 APPPVSSIPPPPP 546
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +2
Query: 545 PXXGGGXPPPPPXXKKXXXPPPXXXXXRGXXXXXXXXXXXXXGXXPAXXXXXXPPXPXPX 724
P G G PPPPP PPP G P PP P P
Sbjct: 248 PLAGSGSPPPPPAAGS---PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
Query: 725 GXXPXXXXXP 754
G P P
Sbjct: 305 GSPPTGSLPP 314
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 512 PPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
PP PP G PPPPP P PP P G P
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPP 308
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Frame = -3
Query: 570 GGXPPPXXGXXXXXXKKXGAPPXXXGXXXP---XXXPPPPPXXXKKXXFXXXTX*XKXPP 400
G PPP G PP G P PPPPP P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Query: 399 XPXGGGGPP 373
P G G PP
Sbjct: 322 PPAGTGSPP 330
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -1
Query: 485 PPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
PP G PPPPP P PP P G+P
Sbjct: 232 PPAGSPPPPP----PPKGSPPLAGSGSPPPPPAAGSP 264
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +2
Query: 494 PXXXGGAPXFFXXXXXXPXXGGGXPPPPPXXKKXXXPPPXXXXXRGXXXXXXXXXXXXXG 673
P G+P P GG PPPP PPP RG G
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP-----RGSPPTGSLPPPQAGG 319
Query: 674 XXPAXXXXXXPPXP 715
P PP P
Sbjct: 320 SPPPAGTGSPPPPP 333
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = -3
Query: 576 GGGGXPPPXXGXXXXXXKKXGAPPXXXGXXXP--XXXPPPPPXXXKKXXFXXXTX*XKXP 403
G PPP G PP G P PPPPP P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG--------------SP 280
Query: 402 PXPXGGGGPP 373
P P GG PP
Sbjct: 281 PPPPAGGSPP 290
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +2
Query: 545 PXXGGGXPPPPPXXKKXXXPPPXXXXXRGXXXXXXXXXXXXXGXXPAXXXXXXPPXPXPX 724
P G G PPPPP PPP G P PP P P
Sbjct: 269 PLAGSGSPPPPPAAGS---PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
Query: 725 GXXPXXXXXP 754
G P P
Sbjct: 326 GSPPTGSLPP 335
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 512 PPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
PP PP G PPPPP P PP P G P
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPP 329
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Frame = -3
Query: 570 GGXPPPXXGXXXXXXKKXGAPPXXXGXXXP---XXXPPPPPXXXKKXXFXXXTX*XKXPP 400
G PPP G PP G P PPPPP P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Query: 399 XPXGGGGPP 373
P G G PP
Sbjct: 343 PPAGTGSPP 351
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -1
Query: 485 PPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
PP G PPPPP P PP P G+P
Sbjct: 253 PPAGSPPPPP----PPKGSPPLAGSGSPPPPPAAGSP 285
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +2
Query: 494 PXXXGGAPXFFXXXXXXPXXGGGXPPPPPXXKKXXXPPPXXXXXRGXXXXXXXXXXXXXG 673
P G+P P GG PPPP PPP RG G
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP-----RGSPPTGSLPPPQAGG 340
Query: 674 XXPAXXXXXXPPXP 715
P PP P
Sbjct: 341 SPPPAGTGSPPPPP 354
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = -3
Query: 576 GGGGXPPPXXGXXXXXXKKXGAPPXXXGXXXP--XXXPPPPPXXXKKXXFXXXTX*XKXP 403
G PPP G PP G P PPPPP P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG--------------SP 301
Query: 402 PXPXGGGGPP 373
P P GG PP
Sbjct: 302 PPPPAGGSPP 311
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +2
Query: 545 PXXGGGXPPPPPXXKKXXXPPPXXXXXRGXXXXXXXXXXXXXGXXPAXXXXXXPPXPXPX 724
P G G PPPPP PPP G P PP P P
Sbjct: 254 PLAGSGSPPPPPAAGS---PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
Query: 725 GXXPXXXXXP 754
G P P
Sbjct: 311 GSPPTGSLPP 320
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 512 PPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
PP PP G PPPPP P PP P G P
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPP 314
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Frame = -3
Query: 570 GGXPPPXXGXXXXXXKKXGAPPXXXGXXXP---XXXPPPPPXXXKKXXFXXXTX*XKXPP 400
G PPP G PP G P PPPPP P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Query: 399 XPXGGGGPP 373
P G G PP
Sbjct: 328 PPAGTGSPP 336
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -1
Query: 485 PPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
PP G PPPPP P PP P G+P
Sbjct: 238 PPAGSPPPPP----PPKGSPPLAGSGSPPPPPAAGSP 270
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +2
Query: 494 PXXXGGAPXFFXXXXXXPXXGGGXPPPPPXXKKXXXPPPXXXXXRGXXXXXXXXXXXXXG 673
P G+P P GG PPPP PPP RG G
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP-----RGSPPTGSLPPPQAGG 325
Query: 674 XXPAXXXXXXPPXP 715
P PP P
Sbjct: 326 SPPPAGTGSPPPPP 339
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = -3
Query: 576 GGGGXPPPXXGXXXXXXKKXGAPPXXXGXXXP--XXXPPPPPXXXKKXXFXXXTX*XKXP 403
G PPP G PP G P PPPPP P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG--------------SP 286
Query: 402 PXPXGGGGPP 373
P P GG PP
Sbjct: 287 PPPPAGGSPP 296
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXK-KXQXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXPXXP 716
P GG PPPPPP + PPP P APP P P
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 555 GGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXPXXP 716
G PP PPP PPP P G P PP P P
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 311
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 591 FXXXGGGGGXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPP 457
F G GG PPP G PP P PPPPP
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS-AGPGMYPPPPP 368
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXP 617
P G PPPPPP + PP P
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPPGMP 314
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G PP PPPPP + P PP P G P
Sbjct: 286 RPPPPPSSGMWPPP--PPPPPG---RTPGPPGMPGMPPPPPPSRFGPP 328
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXP 647
P G P PPP PPP P G P
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 311
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXK-KXQXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXPXXP 716
P GG PPPPPP + PPP P APP P P
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 555 GGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXPXXP 716
G PP PPP PPP P G P PP P P
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 321
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 591 FXXXGGGGGXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPP 457
F G GG PPP G PP P PPPPP
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS-AGPGMYPPPPP 378
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXP 617
P G PPPPPP + PP P
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPPGMP 324
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G PP PPPPP + P PP P G P
Sbjct: 296 RPPPPPSSGMWPPP--PPPPPG---RTPGPPGMPGMPPPPPPSRFGPP 338
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXP 647
P G P PPP PPP P G P
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 321
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.60
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Frame = -1
Query: 512 PPXXXXGXXPPX-----GXPPPPPXXXKKXXXXPXXXXKXXPPXPXG-GGAPQ 372
PP G PP G PPPPP P PP P G G APQ
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQ 128
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = -1
Query: 512 PPXXXXGXXPPX----GXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
PP G PP G PPPPP P PP P G P
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPP 115
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 515 PXFFXXXXXXPXXGGGXPPPPPXXKKXXXPPP 610
P F P GG PPPPP PPP
Sbjct: 88 PMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXP 647
P GG PPPPP PPP P G P
Sbjct: 99 PMMGGIPPPPPMFGAPP--PPPPPSGLGVAPQPP 130
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 545 PXXGGGXPPPPPXXKKXXXPPP 610
P GG PPPPP PPP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPP 98
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXP 617
P G PPPPPP PP P
Sbjct: 109 PMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPP 611
P GG PPPPP PPP
Sbjct: 78 PGPGGIPPPPPMFAGGIPPPPP 99
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -1
Query: 482 PXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAPQXXXFF 357
P G PPPP P PP P GG P F
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP + + PPP P
Sbjct: 479 PPPPPPENEPEEFPPPPP 496
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G G PPPPP + + PP P G G+P
Sbjct: 94 RRPPPPPKGT----GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSP 137
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G G PPPPP + + PP P G G+P
Sbjct: 125 RRPPPPPKGT----GSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSP 168
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G G PPPPP + + PP P G G+P
Sbjct: 187 RRPPPPPKGT----GTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSP 230
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = -3
Query: 576 GGGGXPPPXXGXXXXXXKKXGAPPXXXGXXXPXXXPPPPPXXXKKXXFXXXTX*XKXPPX 397
G G PP G + A PPPPP + + PP
Sbjct: 226 GTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPP 285
Query: 396 PXGGGGPP 373
P G G PP
Sbjct: 286 PKGTGTPP 293
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G G PPPPP + + PP P G G P
Sbjct: 31 RRPPPPPKGT----GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTP 74
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G G PPPPP + + PP P G G P
Sbjct: 156 RRPPPPPKGT----GSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTP 199
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G G PPPPP + + PP P G G P
Sbjct: 249 RRPPPPPKGT----GSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTP 292
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G P PPPP + + PP P G G P
Sbjct: 62 RRPPPPPKGTGTP---PPPPTGEPQDLSAEEGNASRRPPPPPKGTGTP 106
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = -1
Query: 518 RAPPXXXXGXXPPXGXPPPPPXXXKKXXXXPXXXXKXXPPXPXGGGAP 375
R PP G G P PPP + + PP P G G+P
Sbjct: 218 RRPPPPPKGT----GSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSP 261
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXP 617
P GG PPPPP ++ PP P
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 507 GGRPXFXXXXGAXPXXGGXPPPPPPXXKKXQXPPP 611
GG P P G PPPPP Q PPP
Sbjct: 75 GGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPP 109
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 494 PXXXGGAPXFFXXXXXXPXXGGGXPPPPPXXKKXXXPPP 610
P G P P G G PPPPP PPP
Sbjct: 72 PFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPP 110
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXP 617
P GG PPPPP ++ PP P
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP + PPP P
Sbjct: 85 PPPPPPPPPTLKAPPPPP 102
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP Q PP P
Sbjct: 70 PPPPPPLISILQQAPPPP 87
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP + PPP P
Sbjct: 41 PPPPPPCGGGYEAPPPPP 58
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 555 GGXPPPPPPXXKKXQXPPP 611
GG PPPPP + + PPP
Sbjct: 134 GGSSPPPPPPPRVPRTPPP 152
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 3/54 (5%)
Frame = +3
Query: 564 PPPPPPXXKKX---QXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXPXXP 716
PPPPPP K PPP P P PP P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTP 175
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +2
Query: 446 FXXXGGGGGXXXGXXXPXXXGGAPXFFXXXXXXPXXGGGXPPPPPXXKKXXXPPP 610
F G GG P GAP + P GG PPPP PPP
Sbjct: 397 FGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGP---GGFGPPPPGGPGAYGPPP 448
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 537 GAXPXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXP 647
GA P G PPP P PP P G G P
Sbjct: 788 GAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP PPP P
Sbjct: 252 PPPPPPCPMPIPCPPPPP 269
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 540 AXPXXGGXPPPPPPXXKKXQXPPP 611
A P PPP PP K + PPP
Sbjct: 44 AAPPFAPPPPPSPPLPPKCECPPP 67
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 537 GAXPXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXP 647
GA P G PPP P PP P G G P
Sbjct: 788 GAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 373 WGAPPPXGXGGXFXLXXXGXKXXFFXXXGGGGGXPXGGXXPXXXWGG 513
WG P G G + G + + GGG G GG WGG
Sbjct: 229 WGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGG--QGGWGG 273
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 373 WGAPPPXGXGGXFXLXXXGXKXXFFXXXGGGGGXPXGGXXPXXXWGG 513
WG P G G + G + + GGG G GG WGG
Sbjct: 191 WGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGG--QGGWGG 235
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 373 WGAPPPXGXGGXFXLXXXGXKXXFFXXXGGGGGXPXGGXXPXXXWGG 513
WG P G G + G + + GGG G GG WGG
Sbjct: 229 WGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGG--QGGWGG 273
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Frame = -3
Query: 579 GGGGGXPPPXXGXXXXXXKKX-GAPPXXXGXXXPXXXPP---PPP 457
G GG PPP G G PP G P PP PPP
Sbjct: 1568 GWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPP 1612
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP PPP P
Sbjct: 1343 PPPPPPSDDLTPVPPPPP 1360
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 458 GGGGGXXXGXXXPXXXGGAPXFFXXXXXXPXXGGGXPPPP 577
GGGGG G P P P GGG PPPP
Sbjct: 24 GGGGGCGCGAPPPPPACAPPP-------APACGGGAPPPP 56
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP PPP P
Sbjct: 538 PPPPPPVGMANGGPPPPP 555
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 616 GXGGGXXXFFXXGGGGGGXPPXXGXAP 536
G GGG F GGG G P G AP
Sbjct: 488 GFGGGGGGFGGGGGGFGSGSPFGGAAP 514
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP K PP P
Sbjct: 52 PPPPPPPAPKVPEPPKAP 69
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 545 PXXGGGXPPPPPXXKKXXXPPPXXXXXRG 631
P GG PPPPP PPP G
Sbjct: 783 PRLQGGIPPPPPLGIIPPPPPPGNLLMNG 811
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP PPP P
Sbjct: 63 PPPPPPPPPPMCPPPPPP 80
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP PPP P
Sbjct: 65 PPPPPPPPMCPPPPPPMP 82
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 564 PPPPPPXXKKXQXPPPXP 617
PPPPPP PPP P
Sbjct: 72 PPPPPPPMPCPPPPPPMP 89
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 628 PXXXGXGGGXXXFFXXGGGGGGXPPXXGXAPXXXKKXGRPP 506
P G GGG GGGGGG K GRPP
Sbjct: 618 PGGPGGGGGPPRG-PGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 628 PXXXGXGGGXXXFFXXGGGGGGXPPXXGXAPXXXKKXGRPP 506
P G GGG GGGGGG K GRPP
Sbjct: 618 PGGPGGGGGPPRG-PGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXP 707
P G PPPP + PPP P G G P PP P
Sbjct: 291 PPFGFFPPPP-----RGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPP 339
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 546 PXXGGXPPPPPPXXKKXQXPPPXPXXXGXGXXXPXXXXXXXXXXAPPXXXXXXP 707
P G PPPP + PPP P G G P PP P
Sbjct: 291 PPFGFFPPPP-----RGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPP 339
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 634 PXPXXXGXGGGXXXFFXXGGGGGGXPPXXG 545
P P GGG F GGGGGG G
Sbjct: 312 PCPPRTPAGGGGGGDFPAGGGGGGYSTGGG 341
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 545 PXXGGGXPPPPPXXKKXXXPPPXXXXXRG 631
P GG PPPPP PPP G
Sbjct: 783 PRLQGGIPPPPPLGIIPPPPPPGNLLMNG 811
>U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical
protein K09H11.11 protein.
Length = 121
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 546 PXXGGXPPPPPP 581
P G PPPPPP
Sbjct: 7 PPPGQQPPPPPP 18
Score = 22.2 bits (45), Expect(2) = 9.7
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +3
Query: 558 GXPPPPPPXXKKXQXPPPXP 617
G PPPPP ++ P P
Sbjct: 10 GQQPPPPPPGQQPPHPQIDP 29
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 458 GGGGGXXXGXXXPXXXGGAPXFFXXXXXXPXXGGGXPPPP 577
GG GG G GG+ F P G PPPP
Sbjct: 122 GGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPPP 161
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -1
Query: 485 PPXGXPPPPPXXXKKXXXXPXXXXKXXPPXP 393
PP PPPPP P PP P
Sbjct: 92 PPPSDPPPPPPPVAPHQPPPQLATSAQPPQP 122
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 512 PPXXXXGXXPPXGXPPPPP 456
PP G PP PPPPP
Sbjct: 42 PPPPMCGCAPPPPPPPPPP 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,219,950
Number of Sequences: 27780
Number of extensions: 269040
Number of successful extensions: 3804
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2503
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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