Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_F15
(814 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 3.7
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 3.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 3.7
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 3.7
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 3.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 3.7
DQ096628-1|AAZ74794.1| 1835|Homo sapiens zipzap protein protein. 31 5.0
AY727870-1|AAU20329.2| 1113|Homo sapiens ARID2 protein. 31 5.0
AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein pr... 31 5.0
AY320566-1|AAQ21877.1| 77|Homo sapiens immunoglobulin kappa ch... 31 6.5
AY393461-1|AAR32512.1| 150|Homo sapiens immunoglobulin heavy ch... 30 8.7
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.5 bits (68), Expect = 3.7
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 356 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALXQVQ 532
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ +
Sbjct: 550 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 609
Query: 533 PERGGSNIGSPCWRR 577
RG S +P RR
Sbjct: 610 ARRGRSRSRTPARRR 624
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 31.5 bits (68), Expect = 3.7
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 356 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALXQVQ 532
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ +
Sbjct: 550 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 609
Query: 533 PERGGSNIGSPCWRR 577
RG S +P RR
Sbjct: 610 ARRGRSRSRTPARRR 624
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.5 bits (68), Expect = 3.7
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 356 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALXQVQ 532
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ +
Sbjct: 550 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 609
Query: 533 PERGGSNIGSPCWRR 577
RG S +P RR
Sbjct: 610 ARRGRSRSRTPARRR 624
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.5 bits (68), Expect = 3.7
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 356 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALXQVQ 532
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ +
Sbjct: 515 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 574
Query: 533 PERGGSNIGSPCWRR 577
RG S +P RR
Sbjct: 575 ARRGRSRSRTPARRR 589
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.5 bits (68), Expect = 3.7
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 356 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALXQVQ 532
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ +
Sbjct: 340 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 399
Query: 533 PERGGSNIGSPCWRR 577
RG S +P RR
Sbjct: 400 ARRGRSRSRTPARRR 414
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.5 bits (68), Expect = 3.7
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 356 RQGDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRALXQVQ 532
R+G A G + S AT +R+ G +RS++ + S++PTRRR+ +
Sbjct: 598 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTP 657
Query: 533 PERGGSNIGSPCWRR 577
RG S +P RR
Sbjct: 658 ARRGRSRSRTPARRR 672
>DQ096628-1|AAZ74794.1| 1835|Homo sapiens zipzap protein protein.
Length = 1835
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 680 PATCADSQDILHHANFLPQQSYSH 751
P T +SQ +LHH + +PQQS H
Sbjct: 753 PVTVVNSQTLLHHPSVIPQQSPLH 776
>AY727870-1|AAU20329.2| 1113|Homo sapiens ARID2 protein.
Length = 1113
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 680 PATCADSQDILHHANFLPQQSYSH 751
P T +SQ +LHH + +PQQS H
Sbjct: 753 PVTVVNSQTLLHHPSVIPQQSPLH 776
>AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein
protein.
Length = 1686
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 680 PATCADSQDILHHANFLPQQSYSH 751
P T +SQ +LHH + +PQQS H
Sbjct: 604 PVTVVNSQTLLHHPSVIPQQSPLH 627
>AY320566-1|AAQ21877.1| 77|Homo sapiens immunoglobulin kappa chain
variable region protein.
Length = 77
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 327 RFEGWGSGCNYTET*ELLSQGVWCVYAVDVYG 232
RF GWGSG ++T T L + VY YG
Sbjct: 40 RFSGWGSGTDFTLTISRLEPEDFAVYYCQQYG 71
>AY393461-1|AAR32512.1| 150|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 150
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 486 SLNNSDCDRALPASQRGDVLVGKDVAPDGCSVVPSTARVPSPCLF 352
SL SD ASQ GD L G D+ G +V S+A P +F
Sbjct: 81 SLKASDTAIYYCASQEGDKLFGMDLWGQGTTVTVSSASTKGPSVF 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,741,386
Number of Sequences: 237096
Number of extensions: 2495572
Number of successful extensions: 11306
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11299
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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