Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_F14
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    83   3e-16
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    52   6e-07
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    51   1e-06
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...    50   3e-06
Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical pr...    48   1e-05
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    46   4e-05
U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...    37   0.014
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...    37   0.014
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...    37   0.014
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    36   0.044
Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 48/135 (35%), Positives = 75/135 (55%)
 Frame = +1

Query: 253 MRAVVLTGFGGLKTVKILKKPEPTVGESEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFI 432
           MRA V+  FG    ++ ++   P + +++VL+R  A G+N  D  +R G     P  P++
Sbjct: 10  MRAAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQYGKLPNLPYV 69

Query: 433 LGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAXYVYALPEGMSALDAVAI 612
            G + AG +E VGE+V N KVGD+V    E  + AE V+V     + LPEG+S  +  ++
Sbjct: 70  PGKDGAGFVELVGESVKNVKVGDRVWYGSEADSTAEYVAVNRP--FELPEGVSFEEGASL 127

Query: 613 TTNYVVAYLLLFXMA 657
              Y+ AY  LF +A
Sbjct: 128 GVPYLTAYRALFHLA 142


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 28/84 (33%), Positives = 45/84 (53%)
 Frame = +1

Query: 256 RAVVLTGFGGLKTVKILKKPEPTVGESEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFIL 435
           RA++   +GG   +K L  P+P   E E+L++++  G+   D+    G      K P I 
Sbjct: 11  RALIFESYGGPLEIKQLPIPQP--NEDELLVKMEYSGICHSDVHTWLGDFHYVSKCPMIG 68

Query: 436 GFECAGEIEQVGENVTNFKVGDQV 507
           G E AG +  VG  V N+++GD+V
Sbjct: 69  GHEGAGSVISVGSKVKNWQIGDKV 92


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/83 (30%), Positives = 48/83 (57%)
 Frame = +1

Query: 256 RAVVLTGFGGLKTVKILKKPEPTVGESEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFIL 435
           RA+V   + G   +++ + P P+  + E+L++++  G+   DL V  G +      P + 
Sbjct: 10  RALVFDTWNG--PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVCPLVG 67

Query: 436 GFECAGEIEQVGENVTNFKVGDQ 504
           G E AG + Q+G+NVT +++GD+
Sbjct: 68  GHEGAGSVVQIGKNVTGWQLGDK 90


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
 Frame = +1

Query: 283 GLKTVKILKKPEPTVGESEVLIRVKACGLNFQDL-IVRQGAIDS-PPKTPFILGFECAGE 456
           G+  +++ + P    G  +VL+++   G+   D+  +  GAI S   K P +LG E +G 
Sbjct: 12  GINDLRLEQAPISKPGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKEPMVLGHESSGV 71

Query: 457 IEQVGENVTNFKVGDQVVALP 519
           + ++G  V  FKVGD++   P
Sbjct: 72  VSEIGSEVKGFKVGDRIAMEP 92


>Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical
           protein W09H1.5 protein.
          Length = 344

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
 Frame = +1

Query: 286 LKTVKILKKPEPTVGESEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQ 465
           LKTV I  KP       +VL++  A  +N  DL   QG     P  P + G E  G++  
Sbjct: 34  LKTVTIADKPSA----DQVLVQWIAAPINPADLNQIQGVYPVKPALPAVGGNEGFGKVIS 89

Query: 466 VGENVTNFKVGDQVVA-LPEYRAWAELVSVPAXYVYALPEGMSALDAVAITTNYVVAYLL 642
           VG NV++ KVGD V+        W EL       ++ +   +S   A     N   AY +
Sbjct: 90  VGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLSMEYAATFQVNPPTAYRM 149

Query: 643 L 645
           L
Sbjct: 150 L 150


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
 Frame = +1

Query: 283 GLKTVKILKKPEPTVGESEVLIRVKACGLNFQDLIV-RQGAIDS-PPKTPFILGFECAGE 456
           G+  +++ + P P  G ++VL++V   G+   D+     GAI     K P I+G E +G 
Sbjct: 12  GVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGI 71

Query: 457 IEQVGENVTNFKVGDQVVALP 519
           + +VG  V + KVGD++   P
Sbjct: 72  VSEVGNEVKHLKVGDRIAMEP 92


>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 424 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 516
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 424 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 516
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 424 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 516
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 67  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 97


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +1

Query: 424 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 516
           P +LG E +G +E VG+ VT F  GD VV L
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPL 268


>Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical protein
            F20G4.1 protein.
          Length = 1615

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +1

Query: 346  IRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVA 513
            I VKAC ++ + L+  +G    PP  PF L       IE   E V N K  D  +A
Sbjct: 1493 IGVKACEMSAEFLL--EGDDTRPPSNPFTLFLLMRSNIEDFLELVANKKSRDDEIA 1546


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 495 HLKIGDIFANLLDFTSAFEAQDERSLR 415
           H+ +GDI  NL  FT A E  D+R+ R
Sbjct: 426 HVYLGDITRNLEYFTKAIELSDDRNAR 452


>U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical
           protein F31F7.2 protein.
          Length = 689

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +1

Query: 421 TPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAEL 543
           TP I  F+   EI+ + + ++  K+G   VA+ ++  W+ +
Sbjct: 98  TPQITSFQHRAEIDFLRQVMSTMKMGSSKVAMAQFTPWSRI 138


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 129 RRRDSSTGEDPDRKWCY*NTARGNARKIYRGEKG 230
           +RRD+  G++   +W + N A+   R +Y+G +G
Sbjct: 241 QRRDTGEGDELVARWYFDNQAKECRRFLYKGIRG 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,593,386
Number of Sequences: 27780
Number of extensions: 319982
Number of successful extensions: 799
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)