Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_F12
         (805 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P...    31   1.4  
AE014298-763|AAF46053.2|  279|Drosophila melanogaster CG15777-PA...    31   1.4  
AY069512-1|AAL39657.1|  857|Drosophila melanogaster LD23217p pro...    31   2.4  
AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-P...    31   2.4  
AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-P...    31   2.4  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   7.4  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   7.4  

>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
            protein.
          Length = 1895

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +3

Query: 528  SSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLKXVRAGVKP-PLSSXAPSXX 704
            S HPP  +      H    F+    P++  +  N ++ + + +  G+ P PL   +PS  
Sbjct: 1301 SPHPPHPTHQTHTSHYGMSFNGNMAPNMNHM--NQVSHMGRGMGVGLLPLPLQMLSPSRM 1358

Query: 705  XTPSSLGMAKGFRPL 749
              P S+GM     PL
Sbjct: 1359 EQPGSMGMPMNMSPL 1373


>AE014298-763|AAF46053.2|  279|Drosophila melanogaster CG15777-PA
           protein.
          Length = 279

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
 Frame = +3

Query: 465 SQCAGHPFILSHYYWRSRPYASSHPPLRSR----LHQPDHQIPEFHTPTTPDLTSISINP 632
           SQ   H F  SH+++   P+   HP  ++     +  P   +P  + P  P  +  S +P
Sbjct: 69  SQPRSH-FTSSHHHYHL-PHQFQHPHHQNHHTHSVRVPTPTVPSSYAPPPPPDSGSSSSP 126

Query: 633 LNAVLKXVRAGVKPPLSSXAPSXXXTPSSLGMA 731
           ++   +   AGV PP+++ A S    P+   +A
Sbjct: 127 VDR-RRLFMAGVAPPIAAGAGSLMAMPAEPAVA 158


>AY069512-1|AAL39657.1|  857|Drosophila melanogaster LD23217p
           protein.
          Length = 857

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 510 RSRPYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLKXVRAGVKPPL 680
           RS P+ +S     +  H P H +   H P TP   S   + L A L+    G  PPL
Sbjct: 86  RSPPHGNSKSHPHAHPHHPPHSL--HHPPLTPQQNSDLFDSLAAELRAKLNGNGPPL 140


>AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-PB,
           isoform B protein.
          Length = 1006

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 510 RSRPYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLKXVRAGVKPPL 680
           RS P+ +S     +  H P H +   H P TP   S   + L A L+    G  PPL
Sbjct: 235 RSPPHGNSKSHPHAHPHHPPHSL--HHPPLTPQQNSDLFDSLAAELRAKLNGNGPPL 289


>AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-PA,
           isoform A protein.
          Length = 1006

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 510 RSRPYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLKXVRAGVKPPL 680
           RS P+ +S     +  H P H +   H P TP   S   + L A L+    G  PPL
Sbjct: 235 RSPPHGNSKSHPHAHPHHPPHSL--HHPPLTPQQNSDLFDSLAAELRAKLNGNGPPL 289


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,427,095
Number of Sequences: 53049
Number of extensions: 736254
Number of successful extensions: 2395
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2392
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)