Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_F10
(800 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensit... 29 7.4
AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p pro... 29 7.4
AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p pro... 29 7.4
AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA... 29 7.4
BT016087-1|AAV36972.1| 749|Drosophila melanogaster LD41296p pro... 29 9.8
AY051669-1|AAK93093.1| 457|Drosophila melanogaster LD22190p pro... 29 9.8
AJ002520-1|CAC20093.1| 749|Drosophila melanogaster DALAO protei... 29 9.8
AF348329-1|AAK31343.1| 749|Drosophila melanogaster Brahma-assoc... 29 9.8
AE014298-1284|AAF46450.1| 749|Drosophila melanogaster CG7055-PA... 29 9.8
>U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensitive
serotonin transporterprotein.
Length = 622
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 441 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 337
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p
protein.
Length = 622
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 441 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 337
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p
protein.
Length = 249
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -3
Query: 348 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 226
S+ TI CY ++S QCQ R+ +VFF S A C
Sbjct: 14 SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57
>AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA
protein.
Length = 622
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 441 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 337
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>BT016087-1|AAV36972.1| 749|Drosophila melanogaster LD41296p
protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -2
Query: 694 GSIGRAFAVPMRTEHXD-QASFCPFAPREVSVXAELPLGHLRYSLTDVPPQSNSPPGSVL 518
G R + P H Q + PF+P + S P G S PPQ N PG
Sbjct: 590 GGPARPYYQPQYGGHPTPQPYYAPFSPYQQSYGP--PPGSHYMSPRPPPPQHNGNPGHPY 647
Query: 517 EPDH 506
P+H
Sbjct: 648 APEH 651
>AY051669-1|AAK93093.1| 457|Drosophila melanogaster LD22190p
protein.
Length = 457
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -2
Query: 694 GSIGRAFAVPMRTEHXD-QASFCPFAPREVSVXAELPLGHLRYSLTDVPPQSNSPPGSVL 518
G R + P H Q + PF+P + S P G S PPQ N PG
Sbjct: 298 GGPARPYYQPQYGGHPTPQPYYAPFSPYQQSYGP--PPGSHYMSPRPPPPQHNGNPGHPY 355
Query: 517 EPDH 506
P+H
Sbjct: 356 APEH 359
>AJ002520-1|CAC20093.1| 749|Drosophila melanogaster DALAO protein
protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -2
Query: 694 GSIGRAFAVPMRTEHXD-QASFCPFAPREVSVXAELPLGHLRYSLTDVPPQSNSPPGSVL 518
G R + P H Q + PF+P + S P G S PPQ N PG
Sbjct: 590 GGPARPYYQPQYGGHPTPQPYYAPFSPYQQSYGP--PPGSHYMSPRPPPPQHNGNPGHPY 647
Query: 517 EPDH 506
P+H
Sbjct: 648 APEH 651
>AF348329-1|AAK31343.1| 749|Drosophila melanogaster
Brahma-associated protein 111kD protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -2
Query: 694 GSIGRAFAVPMRTEHXD-QASFCPFAPREVSVXAELPLGHLRYSLTDVPPQSNSPPGSVL 518
G R + P H Q + PF+P + S P G S PPQ N PG
Sbjct: 590 GGPARPYYQPQYGGHPTPQPYYAPFSPYQQSYGP--PPGSHYMSPRPPPPQHNGNPGHPY 647
Query: 517 EPDH 506
P+H
Sbjct: 648 APEH 651
>AE014298-1284|AAF46450.1| 749|Drosophila melanogaster CG7055-PA
protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -2
Query: 694 GSIGRAFAVPMRTEHXD-QASFCPFAPREVSVXAELPLGHLRYSLTDVPPQSNSPPGSVL 518
G R + P H Q + PF+P + S P G S PPQ N PG
Sbjct: 590 GGPARPYYQPQYGGHPTPQPYYAPFSPYQQSYGP--PPGSHYMSPRPPPPQHNGNPGHPY 647
Query: 517 EPDH 506
P+H
Sbjct: 648 APEH 651
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,185,616
Number of Sequences: 53049
Number of extensions: 759770
Number of successful extensions: 2333
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2333
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -