Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_F02
         (809 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,...    29   5.7  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   7.5  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   7.5  

>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
            isoform B protein.
          Length = 2833

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
 Frame = +3

Query: 294  SNSVTVQSLPNVSSIIKGYRDAYLVNLE--AVVFPSAPSLKIPVTVDLCWTTADVTVEGV 467
            S  V   SLP + S I   +  YL N         S+ +   P T  +  T   + ++GV
Sbjct: 2196 SQFVNEYSLPELRSAIGEIKKLYLPNDRPATTTLKSSTTTLHPDTTPIA-TLFPIRIKGV 2254

Query: 468  NVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTXPPQT*HPFPSIPLNART 647
            +VL  PS + +T     L  + T         P   +P     PP +    P+IP    T
Sbjct: 2255 SVL--PSLNILTANS-TLTERTTSS------TPDFSTPRTLKTPPVSLTTVPTIPTGTAT 2305

Query: 648  KKEFAP 665
               FAP
Sbjct: 2306 PSSFAP 2311


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 230  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 355
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 230  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 355
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,093,830
Number of Sequences: 53049
Number of extensions: 737878
Number of successful extensions: 2196
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2195
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)