Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_E16
(841 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 31 0.27
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.5
SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol N-ace... 27 3.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 3.3
SPAC1F7.09c |||allantoicase |Schizosaccharomyces pombe|chr 1|||M... 27 4.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 5.8
SPBC365.12c |ish1||LEA domain protein|Schizosaccharomyces pombe|... 26 7.6
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 30.7 bits (66), Expect = 0.27
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 239 VRVHRADTGRSSNELDRQTTELERRGMGL-QHLAG 340
+R H+ GR+ ELDR+ T+L++R L Q + G
Sbjct: 18 LRAHQRSLGRAERELDRERTKLDQRERALIQEIKG 52
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 714 PPXXPPSXAARAXXPXXXXXXXPPXXXAPPXXPP 815
PP PPS A P PP APP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Frame = +1
Query: 688 PPXPXXXXPPPXXPLPXXXXPPXRXXXXXPP-PXXXXXPP 804
PP P P PLP PP PP P PP
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPP 1051
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/44 (29%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Frame = +1
Query: 676 PPXXPPXPXXXXPPPXXPLPXXXXPPXRXXXXXPP-PXXXXXPP 804
P PP P P P+P P + PP P PP
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 803 GGXXXXXGGGXXXXXRXGGXXXXGRGXXGGGXXXXGXGGXXGGP 672
GG GG GG G G G G G GG GGP
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFG-GFGGEGHHHGGHGGFGGGP 230
Score = 25.8 bits (54), Expect = 7.6
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = -3
Query: 800 GXXXXXGGGXXXXXRXGGXXXXGRGXXGGG--XXXXGXGGXXGGP 672
G GGG G G G GGG G GG GGP
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
>SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol
N-acetylglucosaminyltransferase Alg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 162
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 163 YVARSESIMRDSDVAFSHSAALAIAQVRRNGNK 65
Y ES + D+ + SH+ A +I Q R+G +
Sbjct: 63 YAPEIESYIHDASIVISHAGAGSILQTLRSGKR 95
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +1
Query: 637 PPXGXXXXXARGGPPXXPPXPXXXXPPPXXPLPXXXXP 750
PP G P PP P PP P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +1
Query: 673 GPPXXPPXPXXXXPPPXXPLPXXXXPPXRXXXXXPPPXXXXXP 801
G P PP P P P PP PPP P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +1
Query: 670 GGPPXXPPXP--XXXXPPPXXPLP 735
GGPP PP P PPP P P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +1
Query: 688 PPXPXXXXPPPXXPLPXXXXPPXRXXXXXPPP 783
PP P P P P PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
Score = 25.8 bits (54), Expect = 7.6
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 637 PPXGXXXXXARGGPPXXPPXPXXXXPPPXXPLPXXXXPPXRXXXXXPPP 783
PP A P PP P PPP P PP PPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP------PPGVAGAGPPPP 778
>SPAC1F7.09c |||allantoicase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 317 FPCVPTQSFVDPIHLKICQYPHGGL 243
F +P Q+F H+++C YP GG+
Sbjct: 150 FKEIPQQNFT---HVRLCMYPDGGI 171
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 679 PXXPPXPXXXXPPPXXPLPXXXXPPXRXXXXXPPPXXXXXPP 804
P PP P PPP P P PP PPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAP-PMPAGPP----SAPPPPLPASSAP 1741
>SPBC365.12c |ish1||LEA domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 684
Score = 25.8 bits (54), Expect = 7.6
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 240 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDV-VLLNAAATTAGELRS 416
S +++R A + + + +L N G+W TW + R W DV V +++ +T L
Sbjct: 160 SPASLRETAAKEYDALTSKLG-NTGDWIYDTWSDNELRTWLHDVGVPISSHESTRSHLLR 218
Query: 417 PAPVYLIT 440
Y+ T
Sbjct: 219 KLKNYIST 226
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,626,789
Number of Sequences: 5004
Number of extensions: 49996
Number of successful extensions: 185
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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