Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_D15
(925 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 40 0.004
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 35 0.079
07_03_1636 + 28290642-28291574 33 0.24
03_01_0515 - 3864796-3865425 31 1.3
07_01_0479 + 3606663-3607448 30 2.3
08_01_0059 - 394001-394708 30 3.0
07_03_1136 + 24218601-24218734,24218769-24219906 30 3.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 3.9
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 29 5.2
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.2
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 5.2
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 29 6.9
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 29 6.9
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.9
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 39.5 bits (88), Expect = 0.004
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +3
Query: 540 AXXXKKPXPPPPXXTXXGGXXXTPPXSXXXXKXXGXAXXXPPPXXXXXRXXGXXXPXXXG 719
A K P PPPP PP + A PPP R G P
Sbjct: 683 ATSSKGPPPPPPPPL--------PPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPL 734
Query: 720 XXXLXPXAXNKNXXXXPXPPXRXGXGXGGXPPPXXXXPPP 839
L A +N P PP G PPP P P
Sbjct: 735 PPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAPKP 774
Score = 33.9 bits (74), Expect = 0.18
Identities = 28/124 (22%), Positives = 30/124 (24%), Gaps = 2/124 (1%)
Frame = +3
Query: 558 PXPPPPXXTXXG--GXXXTPPXSXXXXKXXGXAXXXPPPXXXXXRXXGXXXPXXXGXXXL 731
P PPPP PP A PPP P
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP 608
Query: 732 XPXAXNKNXXXXPXPPXRXGXGXGGXPPPXXXXPPPXXXXRXAPXXXXXXXFXXXXXRPX 911
P N++ P PP PPP PPP R P P
Sbjct: 609 PPILPNRSVPPPPPPPPPL-PNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPP 667
Query: 912 PXXP 923
P P
Sbjct: 668 PPPP 671
Score = 29.9 bits (64), Expect = 3.0
Identities = 29/122 (23%), Positives = 30/122 (24%), Gaps = 2/122 (1%)
Frame = +2
Query: 566 PPPPXNXXGGXLXXPPPFXXXXXXXXXGXPXPPPAXXXXXXRGGXXXXXXRXXPXXXXXX 745
PPPP PPP P PPP R P
Sbjct: 607 PPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNR--------LVPPPPAPGI 658
Query: 746 XQKXTXXPPXPXXXRXXXRXXXPXPXAXX--PPPXXXPXXPARXXXXXXPXXXXPPXPXT 919
K PP P R R + PPP P PA PP P
Sbjct: 659 GNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPP 718
Query: 920 XP 925
P
Sbjct: 719 PP 720
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 35.1 bits (77), Expect = 0.079
Identities = 26/92 (28%), Positives = 26/92 (28%)
Frame = +3
Query: 564 PPPPXXTXXGGXXXTPPXSXXXXKXXGXAXXXPPPXXXXXRXXGXXXPXXXGXXXLXPXA 743
PPPP GG PP G PPP P G P
Sbjct: 1122 PPPPPIGGLGGHQ-APPAPPLPEGIGGV----PPPPPVGGLGGPPAPPPPAGFRGGTPPP 1176
Query: 744 XNKNXXXXPXPPXRXGXGXGGXPPPXXXXPPP 839
P PP R G GG P P PP
Sbjct: 1177 NAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPP 1208
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 558 PXPPPPXXTXXGGXXXTPPXSXXXXKXXGXAXXXPPP 668
P PPPP G TPP + G PPP
Sbjct: 1184 PPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPP 1220
Score = 28.7 bits (61), Expect = 6.9
Identities = 28/109 (25%), Positives = 30/109 (27%), Gaps = 2/109 (1%)
Frame = -1
Query: 613 GGVXXXPPXXVXXGGGGXGFXXXXAXXXXXXXXXXXXXXXXPPXIXXKXXXGXPPXXXFW 434
GG+ PP G GG A PP PP F
Sbjct: 1116 GGITGVPPPPPIGGLGGH-----QAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFR 1170
Query: 433 XKTPPXXX--GXPPPPXGXXKKXXXLGPPXSXWKISPQNPPXGXXGXXP 293
TPP G PPP GPP +P PP G P
Sbjct: 1171 GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219
>07_03_1636 + 28290642-28291574
Length = 310
Score = 33.5 bits (73), Expect = 0.24
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 454 PPXXXFWXKTPPXXXGXPPPPXGXXKKXXXLGPPXSXWKISPQNPP 317
PP + PP PPPP +K PP + K+SP PP
Sbjct: 153 PPPPQLFETAPPSPPYVPPPPDAYLRKPSPPSPPPA--KLSPPPPP 196
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -1
Query: 490 PPXIXXKXXXGXPPXXXFWXKTPPXXXGXPPPPXGXXKKXXXLGPPXSXWKISPQNPP 317
PP PP PP PPPP PP S K SP PP
Sbjct: 63 PPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 490 PPXIXXKXXXGXPPXXXFWXKTPPXXXGXPPPPXG 386
PP + G PP PP G PPPP G
Sbjct: 217 PPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPG 251
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -1
Query: 424 PPXXXGXPPPPXGXXKK-XXXLGPPXSXWKISPQNPPXGXXGXXP 293
PP G PPPP G + +GPP + P PP G P
Sbjct: 194 PPAFPGGPPPPPGPFMRGPPPMGPPQVRPGM-PGGPPPGMRPGMP 237
>08_01_0059 - 394001-394708
Length = 235
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 812 PXPXAXXPPPXXXPXXPARXXXXXXPXXXXPPXPXTXP 925
P P PPP P P R P PP P P
Sbjct: 5 PPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRP 42
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 3.0
Identities = 26/94 (27%), Positives = 26/94 (27%)
Frame = -1
Query: 838 GGGXXXXGGGXPPXPXPXRXGGXGXXXXFLXXAXGXXXXXPXXXGXXXPXXRXXXXXGGG 659
GG GGG P GG G P G R GGG
Sbjct: 95 GGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGG 154
Query: 658 XXXAXPXXXXXXXEXGGVXXXPPXXVXXGGGGXG 557
A P GG PP GGGG G
Sbjct: 155 GALARPPGGG----RGGALGRPPGG-GGGGGGPG 183
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/93 (23%), Positives = 22/93 (23%)
Frame = +3
Query: 558 PXPPPPXXTXXGGXXXTPPXSXXXXKXXGXAXXXPPPXXXXXRXXGXXXPXXXGXXXLXP 737
P PP P G T A P P P P
Sbjct: 302 PPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAP 361
Query: 738 XAXNKNXXXXPXPPXRXGXGXGGXPPPXXXXPP 836
P PP G G GG PPP P
Sbjct: 362 RPPGPGPGPPP-PPGAAGRGGGGPPPPALPGGP 393
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 768 PXPPXRXGXGXGGXPPPXXXXPPP 839
P PP G G PPP PPP
Sbjct: 634 PVPPPSMANGAGPVPPPIAVAPPP 657
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -1
Query: 490 PPXIXXKXXXGXPPXXXFWXKTPPXXXGXPPPPXGXXKKXXXLGPPXSXWKISPQNPPXG 311
PP K PP PP PPPP G GPP P PP
Sbjct: 314 PPPPPPKPAAAAPPPPP-----PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP 368
Query: 310 XXG 302
G
Sbjct: 369 PPG 371
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 566 PPPPXNXXGGXLXXPPPFXXXXXXXXXGXPXPPPA 670
PPPP PPP G P PPPA
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPA 350
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -1
Query: 490 PPXIXXKXXXGXPPXXXFWXKTPPXXXGXPPPPXGXXKKXXXLGPPXSXWKISPQNPP 317
PP K PP PP PPPP KK GPP K PP
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKG---GPPPPPPKGGASRPP 390
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -1
Query: 454 PPXXXFWXKTPPXXXGXPPPPXGXXKKXXXLGPPXSXWKISPQNPPXGXXGXXP 293
PP PP G PPPP PP P PP G P
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +1
Query: 775 PXXGPGXGXXAXPXPXGXXPPPXPXPXXPRXXXXXXXSXXXXXARPPXXP 924
P P G P P G PPP P P + +RPP P
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGG-KKGGPPPPPPKGGASRPPAAP 393
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 5.2
Identities = 25/96 (26%), Positives = 26/96 (27%), Gaps = 2/96 (2%)
Frame = +3
Query: 558 PXPPPPXXTXXGGXXXTPPXSXXXXKXXGXAXXXPPPXXXXXRXXGXXXPXXXGXXXLXP 737
P PP GG PP S PPP G P P
Sbjct: 304 PPQGPPSYGGPGGDYAAPPSSYGGNNAYNSDSAVPPPSSYGG-GPGSYPPSYGAPPPNPP 362
Query: 738 XAXNKNXXXXPXPPXRXGXGXGGXPPPXXXXP--PP 839
+ PP G G GG P P P PP
Sbjct: 363 YSGGAPGGQGSLPPSYDG-GYGGRPMPGGGGPGAPP 397
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 853 RXXXXGGGXXXXGGGXPPXPXPXRXGGXG 767
R GGG GG PP P R GG G
Sbjct: 857 RDGRRGGGGVRAVGGVPPVQGPARGGGGG 885
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 812 PXPXAXXPPPXXXPXXPARXXXXXXPXXXXPPXPXTXP 925
P P PPP P A P PP P T P
Sbjct: 6 PPPDGLDPPPATPPTAAAGTPPLAVPATNTPPNPATTP 43
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 6.9
Identities = 25/101 (24%), Positives = 28/101 (27%), Gaps = 2/101 (1%)
Frame = +2
Query: 566 PPPPXNXXGGXLXXPPPFXXXXXXXXXGXPXPP--PAXXXXXXRGGXXXXXXRXXPXXXX 739
PPPP G + PPP P PP P G + P
Sbjct: 30 PPPPQQPAYGHM--PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQ 87
Query: 740 XXXQKXTXXPPXPXXXRXXXRXXXPXPXAXXPPPXXXPXXP 862
Q PP P + P P PPP P P
Sbjct: 88 MYYQPP---PPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPP 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.148 0.492
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,361,480
Number of Sequences: 37544
Number of extensions: 595952
Number of successful extensions: 1586
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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