Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_D09
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 42 7e-04
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 38 0.006
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 38 0.006
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 38 0.006
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 38 0.006
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 38 0.006
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 38 0.011
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.011
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 38 0.011
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.011
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 38 0.011
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 37 0.014
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 37 0.014
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 37 0.019
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 36 0.025
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 36 0.025
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 36 0.025
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 36 0.025
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.033
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 36 0.033
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 36 0.033
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 36 0.033
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 36 0.033
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 36 0.033
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 36 0.044
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 36 0.044
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 36 0.044
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 35 0.058
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 35 0.058
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 35 0.058
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 35 0.058
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 35 0.058
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 35 0.076
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 35 0.076
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 35 0.076
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 35 0.076
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 34 0.13
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 34 0.13
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 34 0.13
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 34 0.13
AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical... 34 0.13
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 34 0.13
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 34 0.13
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.18
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 33 0.23
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 33 0.23
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 33 0.23
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 33 0.23
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 33 0.23
U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical pr... 33 0.23
AY849796-1|AAW34234.1| 517|Caenorhabditis elegans acetylcholine... 33 0.23
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 33 0.23
AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical ... 33 0.23
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 33 0.23
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 33 0.23
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 33 0.23
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 33 0.23
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 33 0.23
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 32 0.41
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 32 0.41
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 32 0.41
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 32 0.41
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 32 0.41
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 32 0.41
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical pr... 32 0.54
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 32 0.54
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 32 0.54
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 31 0.71
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 31 0.71
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 31 0.71
Z82262-4|CAE17770.1| 679|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.2
U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated... 31 1.2
U40187-1|AAA81158.3| 459|Caenorhabditis elegans Hypothetical pr... 31 1.2
AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gat... 31 1.2
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 31 1.2
AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical... 31 1.2
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 30 1.6
U97196-15|AAN60541.1| 239|Caenorhabditis elegans Altered averme... 30 1.6
U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered averme... 30 1.6
U97196-13|AAK68666.1| 430|Caenorhabditis elegans Altered averme... 30 1.6
U41113-1|AAC25482.1| 430|Caenorhabditis elegans inhibitory amin... 30 1.6
U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amin... 30 1.6
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 30 1.6
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 30 2.2
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 2.9
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.0
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 28 8.8
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +3
Query: 27 MSTTYIILLPFLLTCAIASAAECENAT-SLSLMIDSLLATYDRESPPDSKIVVNLTLHLR 203
M +++ + F+ T + A E S S + LL +++ SPPD ++ ++ + L
Sbjct: 41 MQCSFLTIFIFITTVTVGVAEFSEQYQGSSSRLTRHLLEKHNKCSPPDGRVDISHNIELV 100
Query: 204 HA-NIRESESTVRILADLQMNWIDKRLSWNAGGM-GLQH 314
H I E +++L + W D LSW G++H
Sbjct: 101 HIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKH 139
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
V S+R+W PD+VL NA + V ++G V+W+ + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 499 QTCT 510
Q CT
Sbjct: 197 QCCT 200
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 328 SERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIK-RLDISTPISMQLDNWPND 495
SERLW P+V +N+ +T + + NG+V W+ R+ +S P S +L +P D
Sbjct: 112 SERLWTPNVCFVNSKSTQVHKSPASNILLIIYPNGTV-WLNYRVQVSAPCSFELSRFPID 170
Query: 496 MQTC 507
Q C
Sbjct: 171 AQEC 174
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
V S+R+W PD+VL NA + V ++G V+W+ + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 499 QTCT 510
Q CT
Sbjct: 197 QCCT 200
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 316 WL-VSSERLWRPDVVLLNAA-ATTAGDYALR-ARVSNNGSVSWIKRLDISTPISMQLDNW 486
W+ +S+ R W PDV+ N D ++ A + NG + + +S+P +++DN+
Sbjct: 100 WIKISASRAWIPDVIFTNGIDMDPLLDKDMQMADLRYNGEIRTSRPAVVSSPCPLEIDNF 159
Query: 487 PNDMQTCTFQV 519
P D+Q C +
Sbjct: 160 PYDVQKCNISM 170
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/98 (19%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 27 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE-SPPDSKIVVNLTLH-L 200
M + ++LL + + + A E + + +L+ TYD + P D +V +T +
Sbjct: 1 MLISCLLLLMLWILRFLTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTF 60
Query: 201 RHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQH 314
++ +++ T++ + + W D L WN + ++
Sbjct: 61 ILLSMDQTQETIQYSEEFLLRWYDPILHWNQSAVSYEN 98
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 298 EWGCSTWLVSSERLWRPDVVLLNAAATT-AGDYALRARVSN-NGSVSWIKRLDISTPISM 471
+WG S ++W P++V +N +T+ G + +N G + +TP
Sbjct: 126 QWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIYLWSDFSFTTPFRF 185
Query: 472 QLDNWPNDMQTCTFQ 516
Q +++PNDMQ ++
Sbjct: 186 QYEDYPNDMQRVCYK 200
Score = 31.5 bits (68), Expect = 0.71
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = +3
Query: 81 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 260
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 261 NWIDKRLSWNAGGMGLQHL 317
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 328 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
S+ +W PD L N + + R R++ +G V++ RL + SM L N+P D
Sbjct: 132 SQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDS 191
Query: 499 QTCTFQV 519
Q CT ++
Sbjct: 192 QNCTVEI 198
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 296
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 297 GMG 305
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 296
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 297 GMG 305
G
Sbjct: 130 LFG 132
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 313 TWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNW 486
TW + +++W PD+++ N A A+R AR+ NG++ + + + ++
Sbjct: 137 TW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAVHTVSCEINIRHF 195
Query: 487 PNDMQTCTFQV 519
P D Q C ++
Sbjct: 196 PLDDQRCAIEI 206
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 296
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 297 GMG 305
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 296
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 297 GMG 305
G
Sbjct: 130 LFG 132
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 313 TWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNW 486
TW + +++W PD+++ N A A+R AR+ NG++ + + + ++
Sbjct: 137 TW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAVHTVSCEINIRHF 195
Query: 487 PNDMQTCTFQV 519
P D Q C ++
Sbjct: 196 PLDDQRCAIEI 206
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 296
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 297 GMG 305
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 296
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 297 GMG 305
G
Sbjct: 130 LFG 132
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 313 TWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNW 486
TW + +++W PD+++ N A A+R AR+ NG++ + + + ++
Sbjct: 137 TW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTIVASHPAVHTVSCEINIRHF 195
Query: 487 PNDMQTCTFQV 519
P D Q C ++
Sbjct: 196 PLDDQRCAIEI 206
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 471
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 472 QLDNWPNDMQTC 507
++ +P D Q C
Sbjct: 154 DVEFFPFDRQQC 165
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 471
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 472 QLDNWPNDMQTC 507
++ +P D Q C
Sbjct: 154 DVEFFPFDRQQC 165
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.019
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +1
Query: 310 STWLVSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLD 480
ST ++S +LW+P + L N+A + L A V N G V W R S ++ Q D
Sbjct: 98 STLSIASSKLWQPALQLYNSARGNSWSLYLTGLPAIVYNTGKV-W-SRGTFSFFVTCQFD 155
Query: 481 --NWPNDMQTC 507
NWP D Q+C
Sbjct: 156 FTNWPYDQQSC 166
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNWPND 495
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 496 MQTC 507
Q C
Sbjct: 161 QQIC 164
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNWPND 495
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 496 MQTC 507
Q C
Sbjct: 161 QQIC 164
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDNWPND 495
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 85 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 144
Query: 496 MQTC 507
Q C
Sbjct: 145 QQIC 148
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 144 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 293
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 35.9 bits (79), Expect = 0.033
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 325 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 501
+S +LWRPDV+L N+ + + Y+ R VS+NG V + + +P D Q
Sbjct: 103 ASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDVQQNPPGIFRFVCQIDVTYYPFDKQ 162
Query: 502 TC 507
TC
Sbjct: 163 TC 164
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 501
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ L +P D Q
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 502 TC 507
TC
Sbjct: 172 TC 173
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 501
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ L +P D Q
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 502 TC 507
TC
Sbjct: 172 TC 173
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 501
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ L +P D Q
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 502 TC 507
TC
Sbjct: 172 TC 173
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
++WRPD++L N+A+ + V N G V+WI M + +P D Q C
Sbjct: 48 QIWRPDILLYNSASEDFDSSFKSNEVVYNTGEVNWIPPGIFRASCKMDITYFPFDDQVC 106
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 501
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ L +P D Q
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 502 TC 507
TC
Sbjct: 172 TC 173
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 337 LWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 513
+W+PDV+L N+ + + A V G+V+WI I + ++ + +P D Q CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 514 Q 516
+
Sbjct: 166 K 166
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.5 bits (78), Expect = 0.044
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +3
Query: 123 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 281
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 282 SWNA 293
SWNA
Sbjct: 110 SWNA 113
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 337 LWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 513
+W+PDV+L N+ + + A V G+V+WI I + ++ + +P D Q CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 514 Q 516
+
Sbjct: 166 K 166
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 35.1 bits (77), Expect = 0.058
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRA---RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 501
+RLW P+ +N+ + R+ + NG+V R+ + P S+ L N+P D+Q
Sbjct: 130 DRLWTPNSCFINSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRVKGPCSLDLSNFPLDLQ 189
Query: 502 TCT 510
C+
Sbjct: 190 KCS 192
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.058
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 36 TYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLR 203
++ + L LL C I+ E + D L+ Y+R + P+ + + L L L
Sbjct: 3 SFWLFLLLLLFC-ISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLS 61
Query: 204 HA-NIRESESTVRILADLQMNWIDKRLSW---NAGGMGLQHL 317
++ E + + L+ WID++LSW N GG+ + ++
Sbjct: 62 QIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLD 480
G + V E +W PD+VL N A + + +A + G V+W + + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 481 NWPNDMQTC 507
+P D Q C
Sbjct: 157 WFPFDEQQC 165
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.058
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 36 TYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLR 203
++ + L LL C I+ E + D L+ Y+R + P+ + + L L L
Sbjct: 3 SFWLFLLLLLFC-ISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLS 61
Query: 204 HA-NIRESESTVRILADLQMNWIDKRLSW---NAGGMGLQHL 317
++ E + + L+ WID++LSW N GG+ + ++
Sbjct: 62 QIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLD 480
G + V E +W PD+VL N A + + +A + G V+W + + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 481 NWPNDMQTC 507
+P D Q C
Sbjct: 157 WFPFDEQQC 165
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.058
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 36 TYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLR 203
++ + L LL C I+ E + D L+ Y+R + P+ + + L L L
Sbjct: 3 SFWLFLLLLLFC-ISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLS 61
Query: 204 HA-NIRESESTVRILADLQMNWIDKRLSW---NAGGMGLQHL 317
++ E + + L+ WID++LSW N GG+ + ++
Sbjct: 62 QIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLD 480
G + V E +W PD+VL N A + + +A + G V+W + + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 481 NWPNDMQTC 507
+P D Q C
Sbjct: 157 WFPFDEQQC 165
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 298 EWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISM 471
E+G T L + LW+PD++L N+A + + VS+NG V + +S S+
Sbjct: 92 EYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDVLFAPPGIVSFSCSL 151
Query: 472 QLDNWPNDMQTC 507
+ +P D Q C
Sbjct: 152 SMTWFPYDQQVC 163
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.076
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
VS +++W PD+VL NA + +++ G + W+ + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 499 QTCT 510
Q CT
Sbjct: 167 QVCT 170
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.076
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
VS +++W PD+VL NA + +++ G + W+ + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 499 QTCT 510
Q CT
Sbjct: 167 QVCT 170
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.076
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
VS +++W PD+VL NA + +++ G + W+ + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 499 QTCT 510
Q CT
Sbjct: 167 QVCT 170
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 34.7 bits (76), Expect = 0.076
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +3
Query: 45 ILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSK--IVVNLTLHLRHA- 209
+LLP LL + + + + +I+ L++ Y RE P DS +VV+L + L+
Sbjct: 1 MLLPILLHFLLL-ITQLNGSPAEVRLINDLMSGYVREERPTLDSSKPVVVSLGVFLQQII 59
Query: 210 NIRESESTVRILADLQMNWIDKRLSW 287
N+ E E + + A L+ W D+ L W
Sbjct: 60 NLSEKEEQLEVNAWLKFQWRDENLRW 85
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
+ LW PD++L N+ + Y + + G+++W+ + + +P D Q C
Sbjct: 101 DALWTPDILLYNSVDSEFDSSYKVNLVNYHTGNINWMPPGIFKVSCKLDIYWFPFDEQVC 160
Query: 508 TFQ 516
F+
Sbjct: 161 YFK 163
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 495
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 496 MQTC 507
Q C
Sbjct: 166 QQIC 169
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +1
Query: 298 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPIS 468
EW G ++ ++W PD + N T ++ R R V + K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 469 MQLDNWPNDMQTCTFQ 516
+ ++P D+Q C Q
Sbjct: 163 VL--SFPFDVQLCALQ 176
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 495
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 496 MQTC 507
Q C
Sbjct: 166 QQIC 169
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +1
Query: 298 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPIS 468
EW G ++ ++W PD + N T ++ R R V + K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 469 MQLDNWPNDMQTCTFQ 516
+ ++P D+Q C Q
Sbjct: 163 VL--SFPFDVQLCALQ 176
>AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical
protein Y46G5A.26a protein.
Length = 515
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +1
Query: 328 SERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
S LW PD + NA ++ + + R+ NNGS+ + +RL + M L +P
Sbjct: 154 SNYLWHPDTFVPNAISSKNPRRQSITHRSLLRLRNNGSILYSRRLSLILTCGMDLTLFPF 213
Query: 493 DMQTC 507
D Q C
Sbjct: 214 DTQLC 218
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 504
++W+PDV NA + + +GS+ + R+ + ++ L+ WP D Q
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 505 CTFQV 519
C ++
Sbjct: 170 CHLRI 174
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 504
++W+PDV NA + + +GS+ + R+ + ++ L+ WP D Q
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 505 CTFQV 519
C ++
Sbjct: 170 CHLRI 174
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +1
Query: 298 EWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 471
+WG ++ + S+++W PD+VL NA A++ ++G V W + +
Sbjct: 96 DWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITITSLAKIDHHGRVVWQPPSIYKSFCPI 155
Query: 472 QLDNWPNDMQTC 507
+ +P D QTC
Sbjct: 156 NIKYFPYDWQTC 167
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +3
Query: 57 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRE 221
FLL I +S ++++LL Y++ P + V +L R ++ E
Sbjct: 11 FLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDE 70
Query: 222 SESTVRILADLQMNWIDKRLSWNAGGMG 305
+ L+M W DK+L+WN G
Sbjct: 71 VNQVLTTSLWLEMQWYDKKLTWNPTDWG 98
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 186 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 293
L +L+ ++E E V ++ +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
R+W+PD++L+N A A + V+++G+V+W+ + +++ +P D Q C
Sbjct: 193 RIWKPDIILVNNAIREYYASLVSTDVMVTSDGNVTWLFSALFRSSCPIRVRYYPFDDQQC 252
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
V+ E++W PD+VL NA + + + G+V W+ + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 499 QTCT 510
Q C+
Sbjct: 175 QLCS 178
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
V+ E++W PD+VL NA + + + G+V W+ + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 499 QTCT 510
Q C+
Sbjct: 175 QLCS 178
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
V+ E++W PD+VL NA + + + G+V W+ + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 499 QTCT 510
Q C+
Sbjct: 175 QLCS 178
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 510
++W+PDV+L N+ T Y V + G V W+ + + +P D Q C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 511 FQ 516
F+
Sbjct: 163 FK 164
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 325 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 501
SS+ +W+PDV+L N+AA + + G+V WI + + + +P D Q
Sbjct: 105 SSDHIWKPDVLLYNSAAEDFDSTFKSNLLTYHTGTVVWIPPGVLKFVCQLDVTWFPFDDQ 164
Query: 502 TC 507
C
Sbjct: 165 VC 166
>U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical
protein F55D10.5 protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK-RLDISTPISMQLDNWPNDM 498
+++W+P+ V +N+ + + + NG+V W+ R+ + P SM +P D
Sbjct: 144 DQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTV-WVNYRVQVKGPCSMDFSAFPMDQ 202
Query: 499 QTC 507
Q+C
Sbjct: 203 QSC 205
>AY849796-1|AAW34234.1| 517|Caenorhabditis elegans
acetylcholine-gated chloride channelsubunit ACC-3
protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK-RLDISTPISMQLDNWPNDM 498
+++W+P+ V +N+ + + + NG+V W+ R+ + P SM +P D
Sbjct: 144 DQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTV-WVNYRVQVKGPCSMDFSAFPMDQ 202
Query: 499 QTC 507
Q+C
Sbjct: 203 QSC 205
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 510
++W+PDV+L N+ T Y V + G V W+ + + +P D Q C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 511 FQ 516
F+
Sbjct: 163 FK 164
>AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical
protein W10G11.16 protein.
Length = 327
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 501
E++WRPD NA + R+ +G V + R+ I ++ L +P+D Q
Sbjct: 35 EKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKPSCNLILCKYPHDKQ 94
Query: 502 TCTFQVR 522
TC ++
Sbjct: 95 TCDLLIK 101
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 510
++W+PDV+L N+ T Y V + G V W+ + + +P D Q C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 511 FQ 516
F+
Sbjct: 163 FK 164
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 510
++W+PDV+L N+ T Y V + G V W+ + + +P D Q C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 511 FQ 516
F+
Sbjct: 163 FK 164
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 84 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 242
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 243 LADLQMNWIDKRLSWN 290
+ W D RLSW+
Sbjct: 117 VISHTQRWYDGRLSWD 132
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 159 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGM-GLQHL 317
PP +I + L++ ++ + E E L D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTAGDYALRARVSNN--GSVSWIKRLDISTPISMQLDNWPND 495
+ S+++W+PD++L N A + V + G++ W ++ + + ++P D
Sbjct: 76 IPSDKIWKPDIILYNNADAQYMKSVMSTDVIVDYLGNIHWPLSAIFTSSCPLDVKHYPFD 135
Query: 496 MQTC 507
QTC
Sbjct: 136 RQTC 139
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 295 GEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSWIKRLDISTPIS 468
G WG L V +++W PD++L N A + A V NG V W + S
Sbjct: 91 GRWGKIRKLHVPVDQIWIPDILLYNNADGEPHITIMSDAIVYYNGLVVWKPPSIYKSFCS 150
Query: 469 MQLDNWPNDMQTC 507
+ ++ +P D QTC
Sbjct: 151 IDIEYFPYDTQTC 163
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 480
G T V +++W PD+VL NA + V + G + W+ + + ++
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 481 NWPNDMQTCT 510
+P D Q C+
Sbjct: 157 FFPFDEQVCS 166
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 480
G T V +++W PD+VL NA + V + G + W+ + + ++
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 481 NWPNDMQTCT 510
+P D Q C+
Sbjct: 157 FFPFDEQVCS 166
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.41
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 177 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 290
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.41
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 177 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 290
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 331 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
E LW PD++L NA + + VS G V+W + ++ ++ +P D+Q C
Sbjct: 85 EMLWLPDIILYNNAHGSPWVSETTQVHVSFEGRVTWQPPVVYDAFCNIDIEWYPYDLQIC 144
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHLAG 323
++ E + + + L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 492
+S+ LW+P + L N+A + A+ A V + G V NWP
Sbjct: 102 ISAHSLWQPALALYNSARGNSWHLYMGAMPATVYSTGKVWSTGTFSFYVTCQFDFTNWPF 161
Query: 493 DMQTC 507
D Q+C
Sbjct: 162 DQQSC 166
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 180 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNA 293
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical
protein F58G6.4 protein.
Length = 466
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 501
+RLW P+ +N+ + + + V +NG++ R+ ++ P M+L +P D Q
Sbjct: 111 QRLWLPNTCFINSKSAAIHESPFKNVFLMVFSNGTLWTNYRMKLTGPCDMKLKRFPFDKQ 170
Query: 502 TC 507
C
Sbjct: 171 KC 172
>AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical
protein Y73F8A.2 protein.
Length = 434
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDMQ 501
+LW P+V ++N+ +T D + + NG++ W+ R+ P M L N+P D
Sbjct: 135 KLWSPNVCIVNSKSTKVHDSPKPNILLMIFPNGTI-WLNYRIRSEAPCQMNLRNFPLDSI 193
Query: 502 TCT 510
C+
Sbjct: 194 RCS 196
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
+LW PDV++ N+A YA V NG V+W+ +Q+ +P D+Q C
Sbjct: 106 QLWTPDVLMYNSADPQFDSRYASNLLVYPNGLVNWMPPGLYRLSCKIQVVWFPFDVQEC 164
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 319 LVSSERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 489
L ++W PD N A T + R+ N+G+V + R+ + M L +P
Sbjct: 140 LTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYP 199
Query: 490 NDMQTCTFQV 519
D+Q C+ +
Sbjct: 200 MDVQQCSIDL 209
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 319 LVSSERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 489
L ++W PD N A T + R+ N+G+V + R+ + M L +P
Sbjct: 140 LTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYP 199
Query: 490 NDMQTCTFQV 519
D+Q C+ +
Sbjct: 200 MDVQQCSIDL 209
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 159 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 290
PP +++ + + + L+ ++ E E V L D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>Z82262-4|CAE17770.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.9 protein.
Length = 679
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 501
E++WRPD ++N+ + + +R R++ G V++ R+ M +P+D Q
Sbjct: 397 EQIWRPDPYIVNSKHSYFHYVSFPNIRMRITPEGLVTYTVRVSSVCSCFMSFCLYPHDRQ 456
Query: 502 TCTFQV 519
C ++
Sbjct: 457 ECDLRI 462
>Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical
protein K10D6.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK-RLDISTPISMQLDNWPNDM 498
E+LW P+ +N+ D + + NG+V W+ R+++ P + L+ +P D+
Sbjct: 134 EQLWTPNSCFVNSKFAEIHDSPFKNVFLMIYPNGTV-WVNYRVNVKGPCDLSLELFPLDI 192
Query: 499 QTC 507
Q C
Sbjct: 193 QEC 195
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 186 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 290
L +L+ ++E V ++ +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 144 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 293
YD ++P + L L+ + E V ++ ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated
chloride channelprotein 3 protein.
Length = 484
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 319 LVSSERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWP 489
L + +++W PD N D + R+ +G + + R+ + M L +P
Sbjct: 110 LTAGQQIWMPDSFFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYP 169
Query: 490 NDMQTC 507
D+QTC
Sbjct: 170 MDVQTC 175
>U40187-1|AAA81158.3| 459|Caenorhabditis elegans Hypothetical
protein F11H8.2 protein.
Length = 459
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 337 LWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
+W PD N + A + R+ N+G+V RL ++ M L +P D Q C
Sbjct: 131 IWTPDTFFPNEKKSFFHEATSHNSFLRIDNHGNVLRSIRLTVTANCPMSLHTFPLDRQEC 190
Query: 508 TFQV 519
+V
Sbjct: 191 ALEV 194
>AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gated
chloride channelsubunit protein.
Length = 484
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 319 LVSSERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWP 489
L + +++W PD N D + R+ +G + + R+ + M L +P
Sbjct: 110 LTAGQQIWMPDSFFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYP 169
Query: 490 NDMQTC 507
D+QTC
Sbjct: 170 MDVQTC 175
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 316 WL-VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSWIKRLDISTPISMQLDNW 486
W+ +S R+W PDV+ + + + A + NG + +ST + + ++
Sbjct: 100 WIKISVSRVWVPDVIFTKRLSVESLLDEDMQMADLRYNGEIRTSLPAVVSTSCPLNIQDF 159
Query: 487 PNDMQTCTFQV 519
P+D+Q C +
Sbjct: 160 PHDVQECNISM 170
>AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical
protein T15B7.16 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIK-RLDISTPISMQLDNWPNDM 498
E+LW P+V +N+ T ++ + + NG+V W+ RL + +P + L +P D+
Sbjct: 113 EKLWTPNVCFVNSKKTEIHSSPTPNIFLMIYPNGTV-WVNYRLQVQSPCMVDLVLFPMDI 171
Query: 499 QTC 507
C
Sbjct: 172 MNC 174
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSWIKRLDISTPISMQLD 480
G T + S+ +W PD+VL N AA L A V+ G+V W + + +
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYWQPPAIYKSFCPIDVT 167
Query: 481 NWPNDMQTC 507
+P D Q C
Sbjct: 168 WFPYDSQKC 176
>U97196-15|AAN60541.1| 239|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform c protein.
Length = 239
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 328 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 499 QTC 507
Q C
Sbjct: 182 QNC 184
>U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform a protein.
Length = 416
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 328 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 499 QTC 507
Q C
Sbjct: 182 QNC 184
>U97196-13|AAK68666.1| 430|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform b protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 328 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 499 QTC 507
Q C
Sbjct: 182 QNC 184
>U41113-1|AAC25482.1| 430|Caenorhabditis elegans inhibitory amino
acid receptorsubunit gbr-2B protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 328 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 499 QTC 507
Q C
Sbjct: 182 QNC 184
>U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amino
acid receptorsubunit gbr-2A protein.
Length = 416
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +1
Query: 328 SERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
S+++W PD N A + R+ NG + + RL + M L+ +P D
Sbjct: 122 SQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDR 181
Query: 499 QTC 507
Q C
Sbjct: 182 QNC 184
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSWIKRLDISTPISMQLD 480
G T + S+ +W PD+VL N AA L A V+ G+V W + + +
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYWQPPAIYKSFCPIDVT 167
Query: 481 NWPNDMQTC 507
+P D Q C
Sbjct: 168 WFPYDSQKC 176
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 328 SERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 498
++R+W PD+ +N+ + L V +G + RLD++ M L +P D
Sbjct: 200 ADRIWYPDLYFVNSKYAYLQEVTTPNLMVIVYPDGLIFKTMRLDVTLSCMMDLKLFPLDY 259
Query: 499 QTCTFQVR 522
Q C ++
Sbjct: 260 QECPLTIQ 267
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 501
+++W PD ++N+ +++ + NG V RL++ TP S+ L +P D
Sbjct: 95 KKIWTPDTCIINSKSSSIHSSPSENTFVILYENGLVWSNFRLNVKTPCSVNLKMFPFDSL 154
Query: 502 TC 507
+C
Sbjct: 155 SC 156
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 90 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 263
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 264 -WIDKRLSW 287
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +3
Query: 57 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRE 221
F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 10 FYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDP 69
Query: 222 SESTVRILADLQMNWIDKRLSWN 290
+E T+ ++ + W D+ L WN
Sbjct: 70 AEETINFSSEFILQWKDEFLFWN 92
>Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical
protein T27E9.9 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 334 RLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 504
++W P +N+ + + ++ +NGS+ R+ ++ P S L +P D Q
Sbjct: 132 KIWNPHACFVNSKLANIHESPFKNIFLQIYSNGSIWHNYRIKLTGPCSSTLRTFPIDQQR 191
Query: 505 C 507
C
Sbjct: 192 C 192
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 96 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 269
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 270 DKRLSWN 290
D RL WN
Sbjct: 93 DDRLMWN 99
>Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical
protein C09G5.1 protein.
Length = 473
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 337 LWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
LW PD+ NA + D + NG+V + R+ ++ L +P D Q C
Sbjct: 121 LWHPDLYFANARTASFHDVTQPNFLVWIYPNGTVWYDCRISLTVLCMQDLARYPLDSQNC 180
Query: 508 TFQV 519
++
Sbjct: 181 GLRI 184
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 192 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 290
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 409 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 513
+S++G V R+ ++ P ++PND + CTF
Sbjct: 146 ISSSGMVRTSARMMLTIPCRTGFGSYPNDYKNCTF 180
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 186 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 290
L L+ + E + V ++ ++ W D RL+WN
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWN 112
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = -1
Query: 448 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSP 302
P A RRRS G RSPRR P A R+ S R+P + SP
Sbjct: 461 PQAPRRRRSP---SGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSP 506
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +3
Query: 120 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 284
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 285 WN 290
WN
Sbjct: 104 WN 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,559,232
Number of Sequences: 27780
Number of extensions: 379258
Number of successful extensions: 1240
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -