Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_D08
(854 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 45 8e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 2e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 42 5e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 5e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 42 7e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 40 4e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 31 0.018
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 2.7
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 4.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 4.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 4.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 4.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 4.7
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 4.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 4.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 4.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 4.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 4.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 4.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 4.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 4.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 4.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 4.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 4.7
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.3
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 443 GDYALRARVSNNGSASWI 496
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 443 GDYALRARVSNNGSASWI 496
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSASWI 496
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSASWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSASWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSASWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSASWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 269 NIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 442
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 443 GDYALRARVSNNGSASWI 496
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 45.2 bits (102), Expect = 8e-07
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Frame = +2
Query: 185 DSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRIPADLQMNWIDKRLS 343
D LL+ Y+R P S +VV L L L N+++ T + L+ W D +
Sbjct: 26 DDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQ 83
Query: 344 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSASW 493
W+ E+G T L V SE +W PD+VL N A G + +A + G W
Sbjct: 84 WDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 44.4 bits (100), Expect = 1e-06
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 191 LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRIPADLQMNWIDKRLSWNAGEW- 361
L YDR+ P+ K ++ L ++H N+ E TV L++ W L+W + E+
Sbjct: 44 LFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFD 103
Query: 362 GCSTWLVSSERLWRPDVVL 418
++ V S +W PD+V+
Sbjct: 104 SINSIRVKSYEIWVPDIVM 122
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 43.6 bits (98), Expect = 2e-06
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Frame = +2
Query: 185 DSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRIPADLQMNWIDKRLS 343
D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +L
Sbjct: 30 DDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLK 87
Query: 344 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSASW 493
W+ E+G L V S+ +WRPD+VL NA A +A ++ G W
Sbjct: 88 WDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 311 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 484
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 485 ASWI 496
++
Sbjct: 136 CLYV 139
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 43.6 bits (98), Expect = 2e-06
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Frame = +2
Query: 185 DSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRIPADLQMNWIDKRLS 343
D LL+ Y+R P LT+ L N++ T + ++ W D +L
Sbjct: 39 DDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYKLK 96
Query: 344 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSASW 493
WN E+G L V SE +W PD+VL N A G+Y + +A + G SW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 42.7 bits (96), Expect = 4e-06
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = +2
Query: 185 DSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRIPADLQMNWIDKRLS 343
D LL+ Y+R P ++ V + L L N++ T + ++ W D +L
Sbjct: 26 DDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLK 83
Query: 344 WNAGEWG-CSTWLVSSERLWRPDVVLLNAA 430
WN ++G T V SE +W PD+VL N A
Sbjct: 84 WNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.3 bits (95), Expect = 5e-06
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Frame = +2
Query: 185 DSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRIPAD---LQMNWIDKRLSWN 349
D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L W
Sbjct: 34 DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWE 93
Query: 350 AGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSASW 493
E+G L V S+ +WRPD+VL NA A +A + + G W
Sbjct: 94 PKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +2
Query: 233 IVVNLTLHLRHANIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 409
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 410 VVLLNAAATTAGDYALRAR--VSNNGSASWI 496
+L N A + VS+ G W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 41.9 bits (94), Expect = 7e-06
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 230 KIVVNLTL-HLRHANIRESESTVRIPADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 403
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 404 PDVVLLNAAATTAGDYALRAR----VSNNGSASWI 496
PD+VL N A G+Y +R + + NG W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 185 DSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRIPAD---LQMNWIDKRLSWN 349
D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L W
Sbjct: 34 DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWE 93
Query: 350 AGEWGCSTWL-VSSERLWRPDVVLLNAA 430
E+G L V S+ +WRPD+VL N A
Sbjct: 94 PKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 39.5 bits (88), Expect = 4e-05
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +2
Query: 182 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRIPADLQMNWIDKRLSWN 349
+D+LL YD PD V + + +R I E + T + + +W+D+RL++
Sbjct: 10 LDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDRRLAFQ 69
Query: 350 AGEWGCSTWLVSSERLWRPDVVLLN 424
G+ + + R+W+PD N
Sbjct: 70 GGKETLALSISMLARIWKPDTYFYN 94
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 30.7 bits (66), Expect = 0.018
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = +2
Query: 182 IDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRIPADLQMNWIDKRLSW 346
+++LL Y+ P + VV + +R + E + + + +W D RLS+
Sbjct: 41 LENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSF 100
Query: 347 NAGEWGCSTWLVSSERLWRPDVVLLN 424
S + ER+WRPD N
Sbjct: 101 LGPIKSLSLSIKMLERIWRPDTYFYN 126
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 201 VARSESIXEGQ*CCVFAFCRTSYSTSEEKPVTR 103
V +++ G+ CC F T Y + K VT+
Sbjct: 593 VGQAKKYVAGEQCCWHCFNCTQYQIRDHKDVTQ 625
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPP 143
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPP 143
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPP 143
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPP 143
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPP 143
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPP 143
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPP 143
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPP 392
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPP 392
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPP 392
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPP 392
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPP 392
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPP 392
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 372 PLTPFPPRFIPPDMYRLRPP 391
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 357 PLTPFPPRFIPPDMYRLRPP 376
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 761 PXXPAPPKXXPPXXXXXXPP 820
P P PP+ PP PP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPP 392
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 6.3
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 233 IVVNLTLHLRHAN-IRESESTVRIPADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 394
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 395 LWRPDVVLLNA 427
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 376 PSAAAPFPCVPTQS 335
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,334
Number of Sequences: 438
Number of extensions: 4476
Number of successful extensions: 70
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -