Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_D07
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 128 6e-30
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 32 0.40
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 32 0.40
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 32 0.40
L23651-1|AAA27964.3| 610|Caenorhabditis elegans Temporarily ass... 31 0.70
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical ... 29 3.7
AF045642-3|AAC02581.1| 588|Caenorhabditis elegans Hypothetical ... 29 4.9
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 128 bits (308), Expect = 6e-30
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +1
Query: 349 METYVYKRRADGTHVINLRRTWEKLVLAARAVVXIENPADVFVISSRPFGQRAVLKFAAH 528
M+ YVYKRR DG ++IN+++TWEKL+LAARA+ +ENPADV V+S+RP+ QRA+LKFAAH
Sbjct: 34 MQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAH 93
Query: 529 TGATPIGGRFXPGAXTNQIQAAFR 600
TGAT I GRF PG TNQIQ F+
Sbjct: 94 TGATAIFGRFSPGCLTNQIQKTFK 117
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 630 PAQDHQPITEPSYVNIPX*LLXAXXTPP*DLVDIAFPCN 746
P DHQ +TE SYV +P + P L+DI PCN
Sbjct: 127 PRIDHQAVTEASYVGVPV-ISFVNTESPLKLIDIGVPCN 164
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 32.7 bits (71), Expect = 0.30
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 429 GCSCCRXHREPR*CVRHLITALRSACCTEVCRAHR 533
GC CC + C R T R+ CCT C R
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCR 116
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 429 GCSCCRXHREPR*CVRHLITALRSACCTEVCRAHR 533
GC CC C R T R+ CCT C R
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 117
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 429 GCSCCRXHREPR*CVRHLITALRSACCTEVCRAHR 533
GC CC C R T R+ CCT C R
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 115
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 429 GCSCCRXHREPR*CVRHLITALRSACCTEVCRAHR 533
GC CC C R T R+ CCT C R
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 116
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 429 GCSCCRXHREPR*CVRHLITALRSACCTEVCRAHR 533
GC CC C R T R+ CCT C R
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 117
>L23651-1|AAA27964.3| 610|Caenorhabditis elegans Temporarily
assigned gene nameprotein 250, isoform a protein.
Length = 610
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 562 PGAXTNQIQAAFRXTSSLDCIGPLPKTINPL--LNLHMSTFPXN 687
P T+ I A TSSL C+ P TI P+ + MS FP N
Sbjct: 351 PTKTTSPITPASASTSSLTCLFDKPATIQPMTVAQMPMSAFPAN 394
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1
Query: 93 ECFLSNGF-GNMFACYVQETCTRQRAVC 13
+C S+GF GN +C+ Q++C ++VC
Sbjct: 2202 QCQCSSGFSGNGVSCFPQKSCRTDKSVC 2229
>AF078789-1|AAK21515.1| 392|Caenorhabditis elegans Hypothetical
protein Y44E3B.2 protein.
Length = 392
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 84 LSNGF-GNMFACYVQETCTRQRAVCKIP 4
LSNG+ NM+ Y + TCTR+ C P
Sbjct: 295 LSNGYTDNMYEYYPRPTCTRENPDCDSP 322
>AF045642-3|AAC02581.1| 588|Caenorhabditis elegans Hypothetical
protein C17H12.2 protein.
Length = 588
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 477 DEHISGVLDGYDSTSSQNKFFPGTTQVDHMGTISTSFVDIGLHRNNK 337
D H+ LD +D N F G +MG + T VDI L N+
Sbjct: 409 DSHLEVALDAHDLHREMN--FHGIPVYSNMGVVGTIRVDIKLDTENR 453
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,246,451
Number of Sequences: 27780
Number of extensions: 432514
Number of successful extensions: 1063
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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