Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_D06
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0621 - 4981070-4981136,4982906-4983825 29 3.7
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 3.7
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 3.7
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 3.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 3.7
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 29 3.7
07_01_0080 + 587674-588510 29 3.7
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 3.7
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 29 3.7
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 3.7
>11_01_0621 - 4981070-4981136,4982906-4983825
Length = 328
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 128 PPPPPHPLPPPPPTPPP 144
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 932 PPPPGKPGGPPPPPPPP 948
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 73 PPPPQTPPSPPPPPPPP 89
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 79 PPSPPPPPPPPPPPPPP 95
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 425 PPPPPLPPPPPPPPPPP 441
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 426 PPPPLPPPPPPPPPPPP 442
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 1171 PPPPLSPSLPPPPPPPP 1187
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 98 PPPPELPPPPPPPPLPP 114
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 104 PPPPPPPPPPPPPPPPP 120
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 105 PPPPPPPPPPPPPPPPP 121
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 349 PPPPPPPPPPPPPPPPP 365
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 38 PPPPPPPPPPPPPPPPP 54
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 39 PPPPPPPPPPPPPPPPP 55
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 40 PPPPPPPPPPPPPPPPP 56
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 353 PPPPPPPPPPPPPPPPP 369
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 354 PPPPPPPPPPPPPPPPP 370
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 355 PPPPPPPPPPPPPPPPP 371
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 358 PPPPPPPPPPPPPPRPP 374
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPXPXXPXXPPPPXXPP 876
PP P P PPPP PP
Sbjct: 359 PPPPPPPPPPPPPRPPP 375
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,173,784
Number of Sequences: 37544
Number of extensions: 180605
Number of successful extensions: 1859
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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