Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_D01
(794 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011121-1|AAR82788.1| 408|Drosophila melanogaster LD13390p pro... 163 2e-40
AF333187-1|AAK60520.1| 386|Drosophila melanogaster beta-alanine... 163 2e-40
AE014297-636|AAF54141.2| 386|Drosophila melanogaster CG3027-PA ... 163 2e-40
AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein. 30 4.2
AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein. 30 4.2
AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein. 30 4.2
AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF... 30 4.2
AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD... 30 4.2
AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC... 30 4.2
AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB... 30 4.2
AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA... 30 4.2
>BT011121-1|AAR82788.1| 408|Drosophila melanogaster LD13390p
protein.
Length = 408
Score = 163 bits (396), Expect = 2e-40
Identities = 81/181 (44%), Positives = 108/181 (59%)
Frame = +2
Query: 65 ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 244
E +L + +L +L+E RI +G + ++L S+ F A++
Sbjct: 27 ELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTARE 86
Query: 245 EQTRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQXLWNM 424
EQTR RIV+VG IQ+SI +PT P+ +Q++AI+NKVK +I A + G NI+C Q W M
Sbjct: 87 EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 146
Query: 425 PFAFCTRXXXPWCEFAESXEDGPTTTFLRELAIKYAMVIVSSILEXDXXXSDXLXNTXVV 604
PFAFCTR PWCEFAE E+GPTT L ELA Y MVI+ SILE D + + NT VV
Sbjct: 147 PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVV 206
Query: 605 I 607
I
Sbjct: 207 I 207
>AF333187-1|AAK60520.1| 386|Drosophila melanogaster beta-alanine
synthase protein.
Length = 386
Score = 163 bits (396), Expect = 2e-40
Identities = 81/181 (44%), Positives = 108/181 (59%)
Frame = +2
Query: 65 ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 244
E +L + +L +L+E RI +G + ++L S+ F A++
Sbjct: 5 ELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTARE 64
Query: 245 EQTRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQXLWNM 424
EQTR RIV+VG IQ+SI +PT P+ +Q++AI+NKVK +I A + G NI+C Q W M
Sbjct: 65 EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 124
Query: 425 PFAFCTRXXXPWCEFAESXEDGPTTTFLRELAIKYAMVIVSSILEXDXXXSDXLXNTXVV 604
PFAFCTR PWCEFAE E+GPTT L ELA Y MVI+ SILE D + + NT VV
Sbjct: 125 PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVV 184
Query: 605 I 607
I
Sbjct: 185 I 185
>AE014297-636|AAF54141.2| 386|Drosophila melanogaster CG3027-PA
protein.
Length = 386
Score = 163 bits (396), Expect = 2e-40
Identities = 81/181 (44%), Positives = 108/181 (59%)
Frame = +2
Query: 65 ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 244
E +L + +L +L+E RI +G + ++L S+ F A++
Sbjct: 5 ELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTARE 64
Query: 245 EQTRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQXLWNM 424
EQTR RIV+VG IQ+SI +PT P+ +Q++AI+NKVK +I A + G NI+C Q W M
Sbjct: 65 EQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTM 124
Query: 425 PFAFCTRXXXPWCEFAESXEDGPTTTFLRELAIKYAMVIVSSILEXDXXXSDXLXNTXVV 604
PFAFCTR PWCEFAE E+GPTT L ELA Y MVI+ SILE D + + NT VV
Sbjct: 125 PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVV 184
Query: 605 I 607
I
Sbjct: 185 I 185
>AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein.
Length = 1027
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 393 TSSVSXSCGICPSRSAQGXXXRGASLPNXLKTGRPRPSFGNSPSS 527
T++ S + P SA G+ N LKT RP S+GN S+
Sbjct: 440 TAATSPAVDSSPMWSASAVQPSGSCQINPLKTSRPASSYGNISST 484
>AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein.
Length = 1023
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 393 TSSVSXSCGICPSRSAQGXXXRGASLPNXLKTGRPRPSFGNSPSS 527
T++ S + P SA G+ N LKT RP S+GN S+
Sbjct: 436 TAATSPAVDSSPMWSASAVQPSGSCQINPLKTSRPASSYGNISST 480
>AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein.
Length = 1015
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 393 TSSVSXSCGICPSRSAQGXXXRGASLPNXLKTGRPRPSFGNSPSS 527
T++ S + P SA G+ N LKT RP S+GN S+
Sbjct: 436 TAATSPAVDSSPMWSASAVQPSGSCQINPLKTSRPASSYGNISST 480
>AE014296-1322|AAX52754.1| 961|Drosophila melanogaster CG7391-PF,
isoform F protein.
Length = 961
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 393 TSSVSXSCGICPSRSAQGXXXRGASLPNXLKTGRPRPSFGNSPSS 527
T++ S + P SA G+ N LKT RP S+GN S+
Sbjct: 374 TAATSPAVDSSPMWSASAVQPSGSCQINPLKTSRPASSYGNISST 418
>AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD,
isoform D protein.
Length = 1027
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 393 TSSVSXSCGICPSRSAQGXXXRGASLPNXLKTGRPRPSFGNSPSS 527
T++ S + P SA G+ N LKT RP S+GN S+
Sbjct: 440 TAATSPAVDSSPMWSASAVQPSGSCQINPLKTSRPASSYGNISST 484
>AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC,
isoform C protein.
Length = 1027
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 393 TSSVSXSCGICPSRSAQGXXXRGASLPNXLKTGRPRPSFGNSPSS 527
T++ S + P SA G+ N LKT RP S+GN S+
Sbjct: 440 TAATSPAVDSSPMWSASAVQPSGSCQINPLKTSRPASSYGNISST 484
>AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB,
isoform B protein.
Length = 1023
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 393 TSSVSXSCGICPSRSAQGXXXRGASLPNXLKTGRPRPSFGNSPSS 527
T++ S + P SA G+ N LKT RP S+GN S+
Sbjct: 436 TAATSPAVDSSPMWSASAVQPSGSCQINPLKTSRPASSYGNISST 480
>AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA,
isoform A protein.
Length = 1023
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 393 TSSVSXSCGICPSRSAQGXXXRGASLPNXLKTGRPRPSFGNSPSS 527
T++ S + P SA G+ N LKT RP S+GN S+
Sbjct: 436 TAATSPAVDSSPMWSASAVQPSGSCQINPLKTSRPASSYGNISST 480
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,253,687
Number of Sequences: 53049
Number of extensions: 455826
Number of successful extensions: 1432
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -