Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_C24
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 48 1e-05
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 48 1e-05
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 46 3e-05
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 46 3e-05
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 46 3e-05
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 46 3e-05
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 46 3e-05
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 46 3e-05
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 46 3e-05
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 46 3e-05
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 46 3e-05
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 45 6e-05
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 44 1e-04
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 44 1e-04
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 43 2e-04
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 43 2e-04
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 43 2e-04
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 43 3e-04
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 42 4e-04
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 42 6e-04
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 41 0.001
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 39 0.005
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 38 0.009
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 38 0.009
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 38 0.009
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 38 0.009
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 37 0.016
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 37 0.021
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 36 0.037
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 36 0.037
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 36 0.037
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.037
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 35 0.064
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 35 0.064
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 35 0.064
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 34 0.11
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 34 0.11
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 34 0.11
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 34 0.11
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.20
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 33 0.20
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 33 0.20
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 33 0.20
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 33 0.26
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 33 0.26
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 33 0.26
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.45
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 32 0.45
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 31 0.79
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 31 0.79
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 31 1.4
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 31 1.4
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 31 1.4
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 1.4
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 30 1.8
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 30 1.8
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 30 1.8
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 30 1.8
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 3.2
U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.2
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 5.5
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 29 5.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 9.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 9.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 9.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 9.7
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 9.7
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 28 9.7
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +2
Query: 89 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSWNAG 265
+ + LL+ ++ ++PPD + V L L H I E + T+ + + + +D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 266 EWG--CSTWLASSERLWRPDVVLLNAAATTXGDYALR--ARVSNNGSV 397
+G TW+ +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTWIPL-DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +2
Query: 20 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANI 184
+ FLL I +S ++++LL Y++ P + V +L R ++
Sbjct: 9 HIFLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDV 68
Query: 185 RESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRPDVVLL-NAAATTXGD 358
E + L+M DK+L+WN +WG ++ S+++W PD+VL NA
Sbjct: 69 DEVNQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNADGEPHIT 128
Query: 359 YALRARVSNNGSVSW 403
A++ ++G V W
Sbjct: 129 ITSLAKIDHHGRVVW 143
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +2
Query: 89 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSWNAG 265
+ + LL+ ++ ++PPD + V L L H I E + T+ + + + +D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 266 EWG--CSTWLASSERLWRPDVVLLNAAATTXGDYALR--ARVSNNGSV 397
+G TW+ +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTWIPL-DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +2
Query: 89 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSWNAG 265
+ + LL+ ++ ++PPD + V L L H I E + T+ + + + +D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 266 EWG--CSTWLASSERLWRPDVVLLNAAATTXGDYALR--ARVSNNGSV 397
+G TW+ +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTWIPL-DKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Frame = +2
Query: 20 YXFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NI 184
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 185 RESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAAATTXG-D 358
E + + L+ ID++LSW+ + G + E +W PD+VL N A +
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNIT 126
Query: 359 YALRARVSNNGSVSW 403
+ +A + G V+W
Sbjct: 127 ISTKATLHYTGEVTW 141
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Frame = +2
Query: 20 YXFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NI 184
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 185 RESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAAATTXG-D 358
E + + L+ ID++LSW+ + G + E +W PD+VL N A +
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNIT 126
Query: 359 YALRARVSNNGSVSW 403
+ +A + G V+W
Sbjct: 127 ISTKATLHYTGEVTW 141
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Frame = +2
Query: 20 YXFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NI 184
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 185 RESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAAATTXG-D 358
E + + L+ ID++LSW+ + G + E +W PD+VL N A +
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNIT 126
Query: 359 YALRARVSNNGSVSW 403
+ +A + G V+W
Sbjct: 127 ISTKATLHYTGEVTW 141
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLL-NAAATTX 352
N+ E ++ L M D +L+WN E+G S S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQ 517
+ V ++G V+W+ + V P + CT GS +N ++
Sbjct: 159 VSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWF-PFDEQCCTLVFGSWTYNSEE 212
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 29 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 193
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 194 ESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLA-SSERLWRPDVVLLNAAATT-XGDYAL 367
V + A L D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 368 RARVSNNGSVSWI 406
V + G V W+
Sbjct: 126 NMIVYSTGLVHWV 138
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLL-NAAATTX 352
N+ E ++ L M D +L+WN E+G S S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQ 517
+ V ++G V+W+ + V P + CT GS +N ++
Sbjct: 159 VSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWF-PFDEQCCTLVFGSWTYNSEE 212
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 29 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 193
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 194 ESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLA-SSERLWRPDVVLLNAAATT-XGDYAL 367
V + A L D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 368 RARVSNNGSVSWI 406
V + G V W+
Sbjct: 126 NMIVYSTGLVHWV 138
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 29 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 193
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 194 ESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLA-SSERLWRPDVVLLNAAATT-XGDYAL 367
V + A L D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 368 RARVSNNGSVSWI 406
V + G V W+
Sbjct: 126 NMIVYSTGLVHWV 138
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 29 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 193
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 194 ESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLA-SSERLWRPDVVLLNAAATT-XGDYAL 367
V + A L D L W+ E+G T + + ++W+PDV+L N+ T Y
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQT 125
Query: 368 RARVSNNGSVSWI 406
V + G V W+
Sbjct: 126 NMIVYSTGLVHWV 138
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRPDVVLL-NAAATTX 352
++ E + + ++ L + +D RLSWN E+G T + E LW PD++L NA +
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNAHGSPW 103
Query: 353 GDYALRARVSNNGSVSW 403
+ VS G V+W
Sbjct: 104 VSETTQVHVSFEGRVTW 120
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 44.4 bits (100), Expect = 1e-04
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Frame = +2
Query: 89 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLS 253
+ + L+A Y++ P S+ +VV L L ++ E + LQ + +D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 254 WNAGEWG-CSTWLASSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSW 403
W+ E+G S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 44.4 bits (100), Expect = 1e-04
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Frame = +2
Query: 89 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLS 253
+ + L+A Y++ P S+ +VV L L ++ E + LQ + +D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 254 WNAGEWG-CSTWLASSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSW 403
W+ E+G S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRPDVVLL-NAAATTX 352
N+ E E + L M D +L W+ ++ T + + E++W PD+VL NA
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNADGNYE 136
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQ 517
+ + + G+V W+ + V + P +LC+ GS +N D+
Sbjct: 137 VSFMCNVLILSTGTVLWVPPAIYKSSCIIDV-EFFPFDDQLCSLTFGSWTYNRDE 190
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRPDVVLL-NAAATTX 352
N+ E E + L M D +L W+ ++ T + + E++W PD+VL NA
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNADGNYE 136
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQ 517
+ + + G+V W+ + V + P +LC+ GS +N D+
Sbjct: 137 VSFMCNVLILSTGTVLWVPPAIYKSSCIIDV-EFFPFDDQLCSLTFGSWTYNRDE 190
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRPDVVLL-NAAATTX 352
N+ E E + L M D +L W+ ++ T + + E++W PD+VL NA
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNADGNYE 136
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQ 517
+ + + G+V W+ + V + P +LC+ GS +N D+
Sbjct: 137 VSFMCNVLILSTGTVLWVPPAIYKSSCIIDV-EFFPFDDQLCSLTFGSWTYNRDE 190
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 42.7 bits (96), Expect = 3e-04
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 8/165 (4%)
Frame = +2
Query: 89 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLS 253
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 254 WNAGEWGCSTWLASS-ERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWIKRLDIST 427
W + T L + LW PD++L N+ + Y + + G+++W+
Sbjct: 85 WEPTAYENVTDLRHPPDALWTPDILLYNSVDSEFDSSYKVNLVNYHTGNINWMPPGIFKV 144
Query: 428 PXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXDSVIGQXIF-XYVP 559
+ P ++C FK GS + D+ G F ++P
Sbjct: 145 SCKLDIYWF-PFDEQVCYFKFGSWTYTRDKIQLEKGDFDFSEFIP 188
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +2
Query: 143 IVVNLTLHLRH-ANIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLASSE-RLWRP 316
++V + L L+ ++ E V + A L+ + +D L W ++G T L + +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 317 DVVLLNAAATTXGD-YALRARVSNNGSVSWI 406
DV++ N+A YA V NG V+W+
Sbjct: 111 DVLMYNSADPQFDSRYASNLLVYPNGLVNWM 141
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 41.9 bits (94), Expect = 6e-04
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Frame = +2
Query: 29 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRES 193
+L+ I + C+ + + + + LL Y+ P + V + L L+ ++ E
Sbjct: 9 ILSLVIIHSNLCDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILDVDEK 68
Query: 194 ESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL---ASSERLWRPDVVLLNAAATT-XGDY 361
V + A L D +L W ++G + SS+ +W+PDV+L N+AA +
Sbjct: 69 NQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSAAEDFDSTF 128
Query: 362 ALRARVSNNGSVSWI 406
+ G+V WI
Sbjct: 129 KSNLLTYHTGTVVWI 143
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 188 ESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLLNAAATT--XGD 358
E + ++ L +N +D RLSWN W R+W+PD++L+N A
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNAIREYYASL 213
Query: 359 YALRARVSNNGSVSWI 406
+ V+++G+V+W+
Sbjct: 214 VSTDVMVTSDGNVTWL 229
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/146 (19%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Frame = +2
Query: 50 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 229
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 230 NXIDKRLSWNAGEWGCSTWLASS-ERLWRPDVVLLNAAATT-XGDYALRARVSN-NGSVS 400
+ D +SW+ +WG S WL ++W P++V +N +T+ G + +N G +
Sbjct: 114 SWNDTMVSWDKEQWGLS-WLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIY 172
Query: 401 WIKRLDISTPXFYAVRQLGPTTCRLC 478
+TP + R+C
Sbjct: 173 LWSDFSFTTPFRFQYEDYPNDMQRVC 198
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 113 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL- 289
YD ++P + L +L+ ++E + + + ++ D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 290 ASSERLWRPDV 322
+++W P +
Sbjct: 123 MKQDKVWSPTI 133
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 20 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NI 184
+ F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 8 FVFYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTL 67
Query: 185 RESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLASSER-LWRPDVVLLNAAAT 346
+E T+ ++ + D+ L WN ++ TWL E LW PD + + T
Sbjct: 68 DPAEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 37.9 bits (84), Expect = 0.009
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLLNAA-ATTX 352
+I E + L+M+ D L+W+ E+G +W+PDV+L N+
Sbjct: 63 DIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFD 122
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGS 496
+ + A V G+V+WI I + + P + CT K GS
Sbjct: 123 STWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYF-PFDTQHCTMKFGS 169
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +2
Query: 143 IVVNLTLHL-RHANIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRP 316
++V + L L N+ E + + L + D ++ WN +G + S +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 317 DVVLL-NAAATTXGDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSG 493
D+VL NA + +++ G + W+ + V + P ++CT G
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDV-EFFPFDEQVCTLVFG 174
Query: 494 SRMHNXDQ 517
S +N ++
Sbjct: 175 SWTYNENE 182
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +2
Query: 143 IVVNLTLHL-RHANIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRP 316
++V + L L N+ E + + L + D ++ WN +G + S +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 317 DVVLL-NAAATTXGDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSG 493
D+VL NA + +++ G + W+ + V + P ++CT G
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDV-EFFPFDEQVCTLVFG 174
Query: 494 SRMHNXDQ 517
S +N ++
Sbjct: 175 SWTYNENE 182
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +2
Query: 143 IVVNLTLHL-RHANIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRP 316
++V + L L N+ E + + L + D ++ WN +G + S +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 317 DVVLL-NAAATTXGDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSG 493
D+VL NA + +++ G + W+ + V + P ++CT G
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDV-EFFPFDEQVCTLVFG 174
Query: 494 SRMHNXDQ 517
S +N ++
Sbjct: 175 SWTYNENE 182
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 37.9 bits (84), Expect = 0.009
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLLNAA-ATTX 352
+I E + L+M+ D L+W+ E+G +W+PDV+L N+
Sbjct: 63 DIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFD 122
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGS 496
+ + A V G+V+WI I + + P + CT K GS
Sbjct: 123 STWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYF-PFDTQHCTMKFGS 169
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 203 VRIQADLQMNXIDKRLSWNAGEWGCST---WLASSERLWRPDVVLLNAAATT-XGDYALR 370
+ + A L+ +D RL W+ ++ T + ++WRPD++L N+A+ +
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSASEDFDSSFKSN 71
Query: 371 ARVSNNGSVSWI 406
V N G V+WI
Sbjct: 72 EVVYNTGEVNWI 83
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 149 VNLTLHLRHAN-IRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLASSERLWRPDVV 325
VN+ L + H + E E T + + ID+ + W+A + + S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 326 LLNAA 340
L N+A
Sbjct: 114 LYNSA 118
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 36.3 bits (80), Expect = 0.028
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 113 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWL 289
YD D+P + L +L+ + E E V + +L D RLSWNA ++ +
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDYKNVTAIF 123
Query: 290 ASSERLWRP 316
E++W P
Sbjct: 124 TRQEKIWSP 132
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 36.3 bits (80), Expect = 0.028
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 167 LRHANIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRPDVVLLNAA 340
+R ++ E + L+M D RL W+ G WG L +++W PD++L N A
Sbjct: 59 IRIIDVDEVNQVLTTNLWLEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 35.9 bits (79), Expect = 0.037
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +2
Query: 143 IVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWL---ASSERLW 310
+VV++ ++L+ ++ E + + A ++ D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 311 RPDVVLLNAA-ATTXGDYALRARVSNNGSV 397
+PDV+L N+A Y + VS G V
Sbjct: 113 KPDVLLYNSADENFDSTYPVNYVVSYTGDV 142
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 35.9 bits (79), Expect = 0.037
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 167 LRHANIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLLNAAA 343
+R ++ E + L+M D +L+W ++G T S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
Query: 344 TTXGDYALR-ARVSNNGSVSW 403
L A V+ G+V W
Sbjct: 132 GDPDITILTDALVTFEGNVYW 152
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.037
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Frame = +2
Query: 89 MIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRESESTVRIQADLQMNXIDKRLS 253
++ L YD P D + VN+ L L + ++ E + + Q D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 254 WNAGEWGCSTWLASSE-RLWRPDVVLLNAA-ATTXGDYALRARVSNNGSV 397
W+ E+G T L LW+PD++L N+A + + VS+NG V
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDV 137
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 35.9 bits (79), Expect = 0.037
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 167 LRHANIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLLNAAA 343
+R ++ E + L+M D +L+W ++G T S+ +W PD+VL N AA
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
Query: 344 TTXGDYALR-ARVSNNGSVSW 403
L A V+ G+V W
Sbjct: 132 GDPDITILTDALVTFEGNVYW 152
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.037
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 149 VNLTLHLRHAN-IRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLASSERLWRPDVV 325
V + L++ H + E E T + L + D+ L W ST +S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 326 LLNAA 340
L N+A
Sbjct: 114 LYNSA 118
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 35.1 bits (77), Expect = 0.064
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +2
Query: 182 IRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLLNAA--ATTX 352
+ E + V I L++ ID+ L+W+ ++G S + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 353 GDYALRARVSNNGSVSWIKRL--DIS 424
+ A V N G V + + DIS
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMITDIS 154
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 35.1 bits (77), Expect = 0.064
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 11/169 (6%)
Frame = +2
Query: 35 TCAIASAAECE-NATSLSLMIDSLLATYDRDS-PPDSKIVVNLTLHLRH-ANIRESESTV 205
T ++ A CE N+ ++ LL YD+ P ++ + V++ L ++ ++I E S+
Sbjct: 20 TESLVDPAHCEYNSNHRKSILTDLLQDYDKTMVPSNNSVQVSVELTVQDISSISEISSSF 79
Query: 206 RIQADLQMNXIDKRLSWNAGEWGCSTWLAS----SERLWRPDVVLLNAAATTXGDYA--- 364
D RL + C T L+ SERLW P+V +N+ +T
Sbjct: 80 IADVWFSQVWYDPRLEYR--NISCKTNLSLDSYVSERLWTPNVCFVNSKSTQVHKSPASN 137
Query: 365 LRARVSNNGSVSWIK-RLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHN 508
+ + NG+V W+ R+ +S P + + + P + C S +N
Sbjct: 138 ILLIIYPNGTV-WLNYRVQVSAPCSFELSRF-PIDAQECHLVFESYSYN 184
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 35.1 bits (77), Expect = 0.064
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +2
Query: 182 IRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLLNAA--ATTX 352
+ E + V I L++ ID+ L+W+ ++G S + ++W+PDV++ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEE 128
Query: 353 GDYALRARVSNNGSVSWIKRL--DIS 424
+ A V N G V + + DIS
Sbjct: 129 NEMETNAIVDNTGRVMLFRSMITDIS 154
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +2
Query: 44 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 217
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 218 DLQMNXIDKRLSWNAGEWGCST-WLA-SSERLWRPDVVLLN 334
+ + D L WN W+ S+ R W PDV+ N
Sbjct: 77 EFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 128 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLASSER- 304
PP +++ + + + L+ ++ E E V D D+RL WN E+G + + +R
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 305 LWRPDVVLLNA 337
+W P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 VRIQADLQMNXIDKRLSWNAGEWGCSTW-LASSERLWRPDV 322
+ I L+++ D+RL WN EW L S RLW PD+
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 VRIQADLQMNXIDKRLSWNAGEWGCSTW-LASSERLWRPDV 322
+ I L+++ D+RL WN EW L S RLW PD+
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLA------SSERLWRPDVVLLNAA 340
++ E + I A + + D +L+W+ +G + +S +LWRPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 341 ATT-XGDYALRARVSNNGSV 397
+ + Y+ R VS+NG V
Sbjct: 119 SESFDSTYSSRFIVSSNGDV 138
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/118 (21%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Frame = +2
Query: 89 MIDSLLATYDRDSPP---DSKIVVNLTLHLRHANIR---ESESTVRIQADLQMNXIDKRL 250
+I L Y ++ P +S N+T+ L I+ E++ + + ++ D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 251 SWNAGEWGCSTWL-ASSERLWRPDVVLLNAAATTXGDYALR--ARVSNNGSVSWIKRL 415
+WN ++G L SE +W+PD+++ N A + ++ ++ + G +S + +
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAI 144
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/118 (21%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Frame = +2
Query: 89 MIDSLLATYDRDSPP---DSKIVVNLTLHLRHANIR---ESESTVRIQADLQMNXIDKRL 250
+I L Y ++ P +S N+T+ L I+ E++ + + ++ D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 251 SWNAGEWGCSTWL-ASSERLWRPDVVLLNAAATTXGDYALR--ARVSNNGSVSWIKRL 415
+WN ++G L SE +W+PD+++ N A + ++ ++ + G +S + +
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAI 144
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/118 (21%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Frame = +2
Query: 89 MIDSLLATYDRDSPP---DSKIVVNLTLHLRHANIR---ESESTVRIQADLQMNXIDKRL 250
+I L Y ++ P +S N+T+ L I+ E++ + + ++ D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 251 SWNAGEWGCSTWL-ASSERLWRPDVVLLNAAATTXGDYALR--ARVSNNGSVSWIKRL 415
+WN ++G L SE +W+PD+++ N A + ++ ++ + G +S + +
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAI 128
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = +2
Query: 59 ECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLH-LRHANIRESESTVRIQADL 223
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 224 QMNXIDKRLSWNAGEWGCSTWLASSER-LWRPDVVLLNAAAT 346
+ D+ L WN ++ TWL E LW PD + + T
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 33.1 bits (72), Expect = 0.26
Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 2/143 (1%)
Frame = +2
Query: 95 DSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEW- 271
+SL+ S P ++ +L L N+ E ++ M D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 272 GCSTWLASSERLWRPDVVLL-NAAATTXGDYALRARVSNNGSVSWIKRLDISTPXFYAVR 448
G T +++W PD+VL NA + V + G + W+ + V
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDV- 155
Query: 449 QLGPTTCRLCTFKSGSRMHNXDQ 517
+ P ++C+ GS D+
Sbjct: 156 EFFPFDEQVCSLTFGSWTFRKDE 178
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 33.1 bits (72), Expect = 0.26
Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 2/143 (1%)
Frame = +2
Query: 95 DSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEW- 271
+SL+ S P ++ +L L N+ E ++ M D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 272 GCSTWLASSERLWRPDVVLL-NAAATTXGDYALRARVSNNGSVSWIKRLDISTPXFYAVR 448
G T +++W PD+VL NA + V + G + W+ + V
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDV- 155
Query: 449 QLGPTTCRLCTFKSGSRMHNXDQ 517
+ P ++C+ GS D+
Sbjct: 156 EFFPFDEQVCSLTFGSWTFRKDE 178
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 155 LTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRP 316
L +L+ ++E V + +L D RLSWN + ST A E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 155 LTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRP 316
L +L+ ++E E V + +L D RLSWN+ + T E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 32.3 bits (70), Expect = 0.45
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Frame = +2
Query: 59 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMNX 235
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 236 I--DKRLSW-NAGEWGCSTWLASSE---RLWRPDVVLLNAAATT 349
I D RLS+ + + L S+ ++W PD ++N+ +++
Sbjct: 68 IWQDPRLSFKHLNVCATNITLKVSDFRKKIWTPDTCIINSKSSS 111
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 31.5 bits (68), Expect = 0.79
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Frame = +2
Query: 26 FLLTCAIASAAECENATSLSLMIDSLL----ATYDRDSPP-----DSKIVVNLTLHLRH- 175
FLL + E + + + +D+LL YD SPP + VV L +++
Sbjct: 8 FLLLYRNSPKVEASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGM 67
Query: 176 ANIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLASSERLWRPDVVLLNA 337
++ R ++ Q D RL+ N A ++W+PDV NA
Sbjct: 68 SSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 31.5 bits (68), Expect = 0.79
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Frame = +2
Query: 26 FLLTCAIASAAECENATSLSLMIDSLL----ATYDRDSPP-----DSKIVVNLTLHLRH- 175
FLL + E + + + +D+LL YD SPP + VV L +++
Sbjct: 8 FLLLYRNSPKVEASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGM 67
Query: 176 ANIRESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLASSERLWRPDVVLLNA 337
++ R ++ Q D RL+ N A ++W+PDV NA
Sbjct: 68 SSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +1
Query: 607 PXNXXXGGXPXLAXXPKXFSXEXXPPGKXXXXAXXXGXXXGXPRXPXSPGPXPCPXXXTP 786
P GG P A P+ + + PG+ G R +PGP P P
Sbjct: 154 PGQDAVGGGPGPAG-PQGPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPSGAPGPQGP 212
Query: 787 XGXRGXPG 810
G G PG
Sbjct: 213 AGGPGQPG 220
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 122 DSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASS 298
D K+ ++++L+ + + E +++ + D+ L WN E+G ++ +
Sbjct: 73 DHKKSLKVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPF 131
Query: 299 ERLWRPDVVLLNA 337
LW PD L N+
Sbjct: 132 HHLWIPDTYLYNS 144
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 122 DSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASS 298
D K+ ++++L+ + + E +++ + D+ L WN E+G ++ +
Sbjct: 73 DHKKSLKVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPF 131
Query: 299 ERLWRPDVVLLNA 337
LW PD L N+
Sbjct: 132 HHLWIPDTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 122 DSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASS 298
D K+ ++++L+ + + E +++ + D+ L WN E+G ++ +
Sbjct: 73 DHKKSLKVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPF 131
Query: 299 ERLWRPDVVLLNA 337
LW PD L N+
Sbjct: 132 HHLWIPDTYLYNS 144
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 809 PGNPRXPXGVKXXGQGXGPGXXGXRGXPXXXPXXXA 702
PG P P G+ G GPG G G P P A
Sbjct: 121 PGGPGNPGGLGGPGNPGGPGTPGGPGTPGGQPHGTA 156
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/100 (20%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Frame = +2
Query: 131 PDSKIVVNLTLHLRHANIRESE-STVRIQADLQMNXIDKRLSWNAGEWG--CSTWLASSE 301
P + V + + ++ + +++ + + A L+ D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 302 RLWRPDVVLLNAAATTXGD-----YALRARVSNNGSVSWI 406
++W+PD++L N + Y A ++G ++WI
Sbjct: 112 QIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWI 151
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/100 (20%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Frame = +2
Query: 131 PDSKIVVNLTLHLRHANIRESE-STVRIQADLQMNXIDKRLSWNAGEWG--CSTWLASSE 301
P + V + + ++ + +++ + + A L+ D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 302 RLWRPDVVLLNAAATTXGD-----YALRARVSNNGSVSWI 406
++W+PD++L N + Y A ++G ++WI
Sbjct: 112 QIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWI 151
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 161 LHLRHAN-IRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWR 313
LH+ H + I++ + +++ +D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +2
Query: 101 LLATYDRDSPPD--SKIVVNLTLHL---RHANIRESESTVRIQADLQMNXIDKRLSWNAG 265
LL Y+ + P SK +N+T + ++ E + + ++++ +D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 266 EWGCSTWL-ASSERLWRPDVVLLNAA 340
+ T + S+++W+PD++L N A
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIILYNNA 92
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 65 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNXI 238
E+A L+ L I +A+ + + +N L+H + E + I L+++
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 239 DKRLSWNAGEWGCSTWLASS-ERLWRP 316
D RL WN W + + S +W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 113 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWL 289
YD D+P + L L+ + E V + ++ D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 290 ASSERLWRPDVVLLNA 337
+W P + A
Sbjct: 123 TRQSNVWSPTLSAFGA 138
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 679 PPGKXXXXAXXXGXXXGXPRXPXSPGPXPCPXXXTPXGXRGXPGXXFXXXNXXXPP 846
PPG G G R P PGP P P G G PG + PP
Sbjct: 155 PPGPPGGPGELGGPGRGGNRGP--PGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPP 208
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 679 PPGKXXXXAXXXGXXXGXPRXPXSPGPXPCPXXXTPXGXRGXPGXXFXXXNXXXPP 846
PPG G G R P PGP P P G G PG + PP
Sbjct: 155 PPGPPGGPGELGGPGRGGNRGP--PGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPP 208
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +1
Query: 679 PPGKXXXXAXXXGXXX-GXPRXPXSPGPXPCPXXXTPXGXRGXPG 810
PPG G G P P PGP P P G G PG
Sbjct: 172 PPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPG 216
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = -1
Query: 799 PGXXGGXXXXGKXXAXGXEGXGGXPXXNPGXXPPXXXXPGXXFPGKXIWXXXPXGGXXLX 620
PG G GK G G GG P NPG P P P + P
Sbjct: 112 PGPAGPSGAPGKPGRPGRPGAGGLP-GNPGRPPAQPCHPITPPPCRPCPQGPPGAPGSPG 170
Query: 619 PXXXVWDPXWTGXGXSXGS 563
P P G G G+
Sbjct: 171 PQGNAGAPGQPGHGGGSGA 189
>U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical
protein C44B7.4 protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 5 GYYSCYXFLLTCAIASAAECENATSLS 85
GYY CY C I+ A C+N+T L+
Sbjct: 127 GYYRCYRSHEFCLISDAILCKNSTILN 153
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 591 QXGSQTXXXGXRXXPPXGXXXQMXFPGKXXPGXXXXGGXXPGXXXGXPPXPSXPXAXXLP 770
Q +Q G R PP G P K P G P G PP P P
Sbjct: 218 QQQTQNGFRGKRQAPPAGSPPPPP-PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
Query: 771 XXFXPPXXPG 800
PP G
Sbjct: 277 TGSPPPPPAG 286
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 591 QXGSQTXXXGXRXXPPXGXXXQMXFPGKXXPGXXXXGGXXPGXXXGXPPXPSXPXAXXLP 770
Q +Q G R PP G P K P G P G PP P P
Sbjct: 239 QQQTQNGFRGKRQAPPAGSPPPPP-PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
Query: 771 XXFXPPXXPG 800
PP G
Sbjct: 298 TGSPPPPPAG 307
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 591 QXGSQTXXXGXRXXPPXGXXXQMXFPGKXXPGXXXXGGXXPGXXXGXPPXPSXPXAXXLP 770
Q +Q G R PP G P K P G P G PP P P
Sbjct: 224 QQQTQNGFRGKRQAPPAGSPPPPP-PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
Query: 771 XXFXPPXXPG 800
PP G
Sbjct: 283 TGSPPPPPAG 292
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 5/69 (7%)
Frame = +3
Query: 618 GXRXXPPXGXXXQMXFPGKXXPGXXXXGGXX----PGXXXGXPPXPSXPXAXXLPXXFXP 785
G PP PG PG G PG PP S P A +P F P
Sbjct: 228 GTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAFPPGASAPVAPGMPGAFPP 287
Query: 786 -PXXPGVXG 809
PG+ G
Sbjct: 288 GQGGPGMPG 296
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 808 PXTPGXXGGXXXXGKXXAXGXEGXGGXPXXNPG 710
P PG GG GK G EG G P +PG
Sbjct: 239 PGQPGDIGGIGKTGKMGGYGMEGPAG-PPGDPG 270
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -3
Query: 416 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPT 267
P A RRRS G RSPRR P A R+ S R+P + SP+
Sbjct: 461 PQAPRRRRSP---SGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPS 507
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 73 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 162
N+ P D+L + SG+P +LQNR P P
Sbjct: 114 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 142
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 73 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 162
N+ P D+L + SG+P +LQNR P P
Sbjct: 124 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 152
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/68 (27%), Positives = 22/68 (32%)
Frame = +1
Query: 607 PXNXXXGGXPXLAXXPKXFSXEXXPPGKXXXXAXXXGXXXGXPRXPXSPGPXPCPXXXTP 786
P + G P A K S + PG P P +PGP P P
Sbjct: 171 PGSPGQDGQPG-APGNKGPSGQNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGAPGPQGP 229
Query: 787 XGXRGXPG 810
G G PG
Sbjct: 230 PGQPGQPG 237
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/72 (27%), Positives = 22/72 (30%)
Frame = +1
Query: 595 GGPKPXNXXXGGXPXLAXXPKXFSXEXXPPGKXXXXAXXXGXXXGXPRXPXSPGPXPCPX 774
G P + G P A K S PG P P +PGP P
Sbjct: 134 GNGNPGSPGQDGQPG-APGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGTPG 192
Query: 775 XXTPXGXRGXPG 810
P G G PG
Sbjct: 193 PQGPPGQPGQPG 204
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/72 (27%), Positives = 22/72 (30%)
Frame = +1
Query: 595 GGPKPXNXXXGGXPXLAXXPKXFSXEXXPPGKXXXXAXXXGXXXGXPRXPXSPGPXPCPX 774
G P + G P A K S PG P P +PGP P
Sbjct: 167 GNGNPGSPGQDGQPG-APGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGTPG 225
Query: 775 XXTPXGXRGXPG 810
P G G PG
Sbjct: 226 PQGPPGQPGQPG 237
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/68 (26%), Positives = 23/68 (33%)
Frame = +1
Query: 607 PXNXXXGGXPXLAXXPKXFSXEXXPPGKXXXXAXXXGXXXGXPRXPXSPGPXPCPXXXTP 786
P G P A P+ + + PG+ G R +PGP P P
Sbjct: 154 PGQDAVGEGPGPAG-PQGPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPAGAPGPQGP 212
Query: 787 XGXRGXPG 810
G G PG
Sbjct: 213 AGGPGQPG 220
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 262 CVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVD 92
C P F D + H G+T+ ++Q+ ++D G GV I+ C R+D
Sbjct: 94 CAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRID 150
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 262 CVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVD 92
C P F D + H G+T+ ++Q+ ++D G GV I+ C R+D
Sbjct: 820 CAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRID 876
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 727 GXPRXPXSPGPXPCPXXXTPXGXRGXPG 810
G P P PGP P P G G PG
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 727 GXPRXPXSPGPXPCPXXXTPXGXRGXPG 810
G P P PGP P P G G PG
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 727 GXPRXPXSPGPXPCPXXXTPXGXRGXPG 810
G P P PGP P P G G PG
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 727 GXPRXPXSPGPXPCPXXXTPXGXRGXPG 810
G P P PGP P P G G PG
Sbjct: 174 GSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/68 (27%), Positives = 22/68 (32%)
Frame = +1
Query: 607 PXNXXXGGXPXLAXXPKXFSXEXXPPGKXXXXAXXXGXXXGXPRXPXSPGPXPCPXXXTP 786
P GG P A P + + PG+ G R PGP P P
Sbjct: 164 PGQDSFGGGPGPAG-PTGPTGDAGAPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPQGP 222
Query: 787 XGXRGXPG 810
G G PG
Sbjct: 223 AGGPGQPG 230
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 262 CVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVD 92
C P F D + H G+T+ ++Q+ ++D G GV I+ C R+D
Sbjct: 820 CAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRID 876
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,073,551
Number of Sequences: 27780
Number of extensions: 394311
Number of successful extensions: 2515
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2366
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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