Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_C24
(853 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 49 6e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 45 1e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 5e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 41 2e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 39 5e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 7e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 32 0.006
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 1.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 24 2.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 4.7
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 4.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.7
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 22 6.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 48.8 bits (111), Expect = 6e-08
Identities = 48/169 (28%), Positives = 69/169 (40%), Gaps = 9/169 (5%)
Frame = +2
Query: 44 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 202
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 203 VRIQADLQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRPDVVLLNAAATTXGDYAL-RAR 376
+ L+ D + W+ E+G T L SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 377 VSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXD 523
+ G V W + VR P + C K GS ++ Q D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYF-PFDQQTCFMKFGSWTYDGIQID 174
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.8 bits (101), Expect = 1e-06
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 12/157 (7%)
Frame = +2
Query: 89 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNXIDKR 247
+ D LL+ Y+R P LT+ L N++ T + + + N D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWN--DYK 94
Query: 248 LSWNAGEWGCSTWL-ASSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKR 412
L WN E+G L SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 413 LDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXD 523
+ V P + C K GS +N Q D
Sbjct: 152 AIYKSSCEINVEYF-PFDEQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.4 bits (100), Expect = 1e-06
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAA-ATTX 352
++ E + A L++ +D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXDSVI 532
G Y V++NGS ++ + + P + C K GS ++ +Q D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWF-PFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.4 bits (100), Expect = 1e-06
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAA-ATTX 352
++ E + A L++ +D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXDSVI 532
G Y V++NGS ++ + + P + C K GS ++ +Q D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWF-PFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 44.4 bits (100), Expect = 1e-06
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 12/136 (8%)
Frame = +2
Query: 32 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 190
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 191 SESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWRPDVVLLNAAATTXGDYAL 367
T + + + N D +L WN ++G T SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVWVEQEWN--DYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 368 ----RARVSNNGSVSW 403
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAA-ATTX 352
++ E + A L++ +D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXDSVI 532
G Y V++NGS ++ + + P + C K GS ++ +Q D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWF-PFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.2 bits (97), Expect = 3e-06
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Frame = +2
Query: 140 KIVVNLTL-HLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEWG-CSTWLASSERLWR 313
K+ VN L ++ N+ E ++ L+ D +L W+ ++G +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 314 PDVVLLNAAATTXGDYALRAR----VSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCT 481
PD+VL N A G+Y +R + + NG V W+ + V P + C
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYF-PFDQQTCI 166
Query: 482 FKSGSRMHNXDQ 517
K GS N DQ
Sbjct: 167 MKFGSWTFNGDQ 178
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAA-ATTX 352
++ E + A L++ +D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXDSVI 532
G Y V+++GS ++ + V P + C K GS ++ +Q D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWF-PFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAA-ATTX 352
++ E + A L++ +D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXDSVI 532
G Y V+++GS ++ + + P + C K GS ++ +Q D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWF-PFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAA-ATTX 352
++ E + A L++ +D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXDSVI 532
G Y V+++GS ++ + + P + C K GS ++ +Q D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWF-PFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAA-ATTX 352
++ E + A L++ +D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXDSVI 532
G Y V+++GS ++ + + P + C K GS ++ +Q D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWF-PFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 179 NIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVLLNAA-ATTX 352
++ E + A L++ +D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSVSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXDSVI 532
G Y V+++GS ++ + + P + C K GS ++ +Q D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWF-PFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 41.5 bits (93), Expect = 1e-05
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Frame = +2
Query: 62 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 226
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 227 MNXIDKRLSWNAGEW-GCSTWLASSERLWRPDVVL 328
+ L+W + E+ ++ S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 41.1 bits (92), Expect = 1e-05
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 9/163 (5%)
Frame = +2
Query: 62 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 220
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 221 LQMNXIDKRLSWNAGEWGCSTWL-ASSERLWRPDVVLL-NAAATTXGDYALRARVSNNGS 394
++ + D +L W+ E+G L S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 395 VSWIKRLDISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXD 523
V W + V P + C K GS ++ Q D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYF-PFDEQTCVMKFGSWTYDGFQVD 178
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 40.7 bits (91), Expect = 2e-05
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +2
Query: 68 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNX 235
N +++S ++D+LL YD PD V + + +R I E + T + + +
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 236 IDKRLSWNAGEWGCSTWLASSERLWRPDVVLLN 334
+D+RL++ G+ + ++ R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 39.1 bits (87), Expect = 5e-05
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Frame = +2
Query: 20 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NI 184
+ + A+A++ + +++ LL TY+ P +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 185 RESESTVRIQADLQMNXIDKRLSWNAGEWGCSTWLA-SSERLWRPDVVLLNAA-ATTXGD 358
E + L++ D + WN ++G L RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 359 YALRARVSNNGSVSWI 406
Y V NNG+ ++
Sbjct: 124 YPTNVVVKNNGTCLYV 139
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +2
Query: 143 IVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSWNAGEW-GCSTWLASSERLWRPD 319
+V L+LH ++ E + + D L WNA E+ G R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 320 VVLLNAAATTXGDYALRAR--VSNNGSVSWI 406
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 38.3 bits (85), Expect = 9e-05
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = +2
Query: 89 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNXIDKRLS 253
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ + D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 254 WNAGEWGCSTWL-ASSERLWRPDVVLL-NAAATTXGDYALRARVSNNGSVSW 403
W E+G L S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 36.3 bits (80), Expect = 4e-04
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Frame = +2
Query: 89 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNXIDKRLS 253
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ + D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 254 WNAGEWGCSTWL-ASSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKRLD 418
W E+G L S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 419 ISTPXFYAVRQLGPTTCRLCTFKSGSRMHNXDQXD 523
+ V + P + C K GS ++ + D
Sbjct: 149 YKSSCSIDV-EFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.006
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Frame = +2
Query: 77 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNXID 241
++++++++LL Y+ + P + VV + +R + E + + + + D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 242 KRLSWNAGEWGCSTWLASSERLWRPDVVLLNAAATTXGDYAL---RARVSNNGSVSWIKR 412
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 413 LDISTPXFYAVRQLGPTTCRLCTFKSGS 496
L I +R P + C GS
Sbjct: 156 LTIKAKCPMELRNF-PMDRQSCPLILGS 182
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 85 GQ*CCVFAFCRTSYSTSEEKXVTRIIS 5
G+ CC F T Y + K VT+ IS
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCIS 628
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 254 WNAGEWGCSTWLASSERLWRPDVVLLNAAATTXGDY 361
W G+ CS WLA +W +LN A + Y
Sbjct: 131 WIFGDLWCSIWLAVD--VWMCTASILNLCAISLDRY 164
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1
Query: 715 PGXXPPXXXXPGXXFPGKXIWXXXP 641
PG P G FP + IW P
Sbjct: 293 PGYYPTMTYSNGLPFPQRPIWSNFP 317
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1
Query: 715 PGXXPPXXXXPGXXFPGKXIWXXXP 641
PG P G FP + IW P
Sbjct: 293 PGYYPTMTYSNGLPFPQRPIWSNFP 317
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 286 PSAAAPLPCVPTQS 245
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 416 DISTPXFYAVRQLGPTTC 469
DIS+P +GPTTC
Sbjct: 356 DISSPDAVEYGIIGPTTC 373
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,923
Number of Sequences: 438
Number of extensions: 4779
Number of successful extensions: 50
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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