Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_C02
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 36 0.031
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 34 0.12
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.22
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 33 0.29
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.38
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.38
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.38
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 32 0.50
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 32 0.50
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 32 0.66
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 32 0.66
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 32 0.66
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 32 0.66
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 32 0.66
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 32 0.66
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 32 0.66
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.2
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 1.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 2.0
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 30 2.0
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 2.0
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 2.0
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 30 2.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.0
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 2.0
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 30 2.7
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 30 2.7
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.5
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 3.5
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 3.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.5
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 6.2
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 28 8.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.1
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 36.3 bits (80), Expect = 0.031
Identities = 30/117 (25%), Positives = 33/117 (28%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P G P G PP P P+ G
Sbjct: 157 PSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFD 216
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P +G P + G P P A GP G P NP SG
Sbjct: 217 PSGAPPSGGPPGPFNPSGAPPSG---GPPGPFDPSGAPPSGGPPG-PFNPSGAPPSG 269
Score = 36.3 bits (80), Expect = 0.031
Identities = 30/117 (25%), Positives = 33/117 (28%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 217 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFD 276
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P +G P + G P P AQ GP G P NP SG
Sbjct: 277 PSGAPPSGGPPGPFDPSGAPPSG---GPPGPFDPSGAQPSGGPPG-PFNPSGAPPSG 329
Score = 34.7 bits (76), Expect = 0.094
Identities = 29/117 (24%), Positives = 32/117 (27%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 397 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN 456
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P +G P + G P P A GP G P NP SG
Sbjct: 457 PSGAPPSGGPPGPFNPSGAPPSG---GPPGPFDPSGAPPSGGPPG-PFNPSGAPPSG 509
Score = 34.3 bits (75), Expect = 0.12
Identities = 29/117 (24%), Positives = 32/117 (27%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 322 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD 381
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P +G P + G P P A GP G P NP SG
Sbjct: 382 PSGAPPSGGPPGPFDPSGAPPSG---GPPGPFNPSGAPPSGGPPG-PFNPSGAPPSG 434
Score = 34.3 bits (75), Expect = 0.12
Identities = 29/117 (24%), Positives = 32/117 (27%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 337 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD 396
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P +G P + G P P A GP G P NP SG
Sbjct: 397 PSGAPPSGGPPGPFNPSGAPPSG---GPPGPFNPSGAPPSGGPPG-PFNPSGAPPSG 449
Score = 34.3 bits (75), Expect = 0.12
Identities = 29/117 (24%), Positives = 32/117 (27%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 352 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN 411
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P +G P + G P P A GP G P NP SG
Sbjct: 412 PSGAPPSGGPPGPFNPSGAPPSG---GPPGPFNPSGAPPSGGPPG-PFNPSGAPPSG 464
Score = 33.9 bits (74), Expect = 0.16
Identities = 29/117 (24%), Positives = 32/117 (27%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 367 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN 426
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P +G P + G P P A GP G P NP SG
Sbjct: 427 PSGAPPSGGPPGPFNPSGAPPSG---GPPGPFNPSGAPPSGGPPG-PFNPSGAPPSG 479
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/106 (23%), Positives = 28/106 (26%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 292 PSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN 351
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGP 883
P P +G P + G P P A GP GP
Sbjct: 352 PSGAPPSGGPPGPFDPSGAPPSG---GPPGPFDPSGAPPSGGPPGP 394
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/106 (23%), Positives = 28/106 (26%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 412 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN 471
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGP 883
P P +G P + G P P A GP GP
Sbjct: 472 PSGAPPSGGPPGPFDPSGAPPSG---GPPGPFNPSGAPPSGGPPGP 514
Score = 32.7 bits (71), Expect = 0.38
Identities = 25/106 (23%), Positives = 28/106 (26%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P G S P P G P P P+ G
Sbjct: 172 PSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFN 231
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGP 883
P P +G P + G P P A GP GP
Sbjct: 232 PSGAPPSGGPPGPFDPSGAPPSG---GPPGPFNPSGAPPSGGPPGP 274
Score = 32.7 bits (71), Expect = 0.38
Identities = 25/106 (23%), Positives = 28/106 (26%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 232 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD 291
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGP 883
P P +G P + G P P A GP GP
Sbjct: 292 PSGAPPSGGPPGPFDPSGAQPSG---GPPGPFNPSGAPPSGGPPGP 334
Score = 32.7 bits (71), Expect = 0.38
Identities = 25/106 (23%), Positives = 28/106 (26%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 262 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFN 321
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGP 883
P P +G P + G P P A GP GP
Sbjct: 322 PSGAPPSGGPPGPFDPSGAPPSG---GPPGPFNPSGAPPSGGPPGP 364
Score = 32.7 bits (71), Expect = 0.38
Identities = 25/106 (23%), Positives = 28/106 (26%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 382 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN 441
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGP 883
P P +G P + G P P A GP GP
Sbjct: 442 PSGAPPSGGPPGPFNPSGAPPSG---GPPGPFNPSGAPPSGGPPGP 484
Score = 32.3 bits (70), Expect = 0.50
Identities = 25/106 (23%), Positives = 28/106 (26%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 187 PSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFD 246
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGP 883
P P +G P + G P P A GP GP
Sbjct: 247 PSGAPPSGGPPGPFNPSGAPPSG---GPPGPFDPSGAPPSGGPPGP 289
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/72 (26%), Positives = 23/72 (31%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA 847
P G PP P P+ G + P P +G P + G P P
Sbjct: 146 PPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSG---GPPGPFNP 202
Query: 848 RXAQXXXGPXGP 883
A GP GP
Sbjct: 203 SEAPPSGGPTGP 214
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/117 (23%), Positives = 31/117 (26%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P P G PP P P+ G
Sbjct: 247 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD 306
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P +G P + G P P A GP G P NP SG
Sbjct: 307 PSGAQPSGGPPGPFNPSGAPPSG---GPPGPFDPSGAPPSGGPPG-PFNPSGAPPSG 359
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/106 (22%), Positives = 27/106 (25%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P PP P S P G PP P P+ G
Sbjct: 277 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFD 336
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGP 883
P P +G P + G P P A GP GP
Sbjct: 337 PSGAPPSGGPPGPFNPSGAPPSG---GPPGPFDPSGAPPSGGPPGP 379
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 34.3 bits (75), Expect = 0.12
Identities = 27/94 (28%), Positives = 29/94 (30%), Gaps = 2/94 (2%)
Frame = +2
Query: 638 PAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXR-VXGPXAXP-XAGXXPXXXXXXXSXXE 811
P G P P PP P A G P+G GP P AG
Sbjct: 176 PPGPAGPAGGPGPAGPPGP-AGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAP 234
Query: 812 GXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGS 913
G P P A GP GP NP + S
Sbjct: 235 GQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGAS 268
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/86 (29%), Positives = 25/86 (29%), Gaps = 5/86 (5%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGX-----PAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXP 832
P PG P P PP G P R GP P P G P
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP---P 335
Query: 833 XPPXARXAQXXXGPXGPPRNPXAXXG 910
PP P PPR P A G
Sbjct: 336 PPPPGMRYPGGMPPPPPPRYPSAGPG 361
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/86 (29%), Positives = 25/86 (29%), Gaps = 5/86 (5%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGX-----PAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXP 832
P PG P P PP G P R GP P P G P
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP---P 345
Query: 833 XPPXARXAQXXXGPXGPPRNPXAXXG 910
PP P PPR P A G
Sbjct: 346 PPPPGMRYPGGMPPPPPPRYPSAGPG 371
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 33.1 bits (72), Expect = 0.29
Identities = 26/96 (27%), Positives = 29/96 (30%), Gaps = 4/96 (4%)
Frame = +2
Query: 638 PAFXXGXXXHPXPGAPPXPX--PPAXGGXPA-GXXRVXGPXAXPXAGXXPXXXXXXXSXX 808
P G P P PP P P G P+ G GP P P +
Sbjct: 163 PPGPAGPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAPGNPG 222
Query: 809 E-GXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGS 913
G P P A GP GP NP + S
Sbjct: 223 APGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGAS 258
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +2
Query: 668 PXPGAPP----XPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPX 835
P PG PP P PP GG P GP P G P P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 836 PPXARXAQXXXGPXGPP 886
PP GP PP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/77 (28%), Positives = 25/77 (32%)
Frame = +3
Query: 234 GXSQVPPVXGXXGEXXHXXXGVXKPXGXWXPPGGXXGXPPXXXXXPXQXAWGXXPRXVGX 413
G S +PP+ G G+ G PP G PP P G P G
Sbjct: 702 GSSALPPITGGPPPPP----GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Query: 414 GPXPXXPPXAGXXXLPP 464
P P PP PP
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXX-PAFXXGXXXHPXP--GAPPXPXPPAXGGXPAG 727
P PP P T G P G P P G PP P PP GG G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +2
Query: 668 PXPGAPP----XPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPX 835
P PG PP P PP GG P GP P G P P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 836 PPXARXAQXXXGPXGPP 886
PP GP PP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/77 (28%), Positives = 25/77 (32%)
Frame = +3
Query: 234 GXSQVPPVXGXXGEXXHXXXGVXKPXGXWXPPGGXXGXPPXXXXXPXQXAWGXXPRXVGX 413
G S +PP+ G G+ G PP G PP P G P G
Sbjct: 702 GSSALPPITGGPPPPP----GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Query: 414 GPXPXXPPXAGXXXLPP 464
P P PP PP
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXX-PAFXXGXXXHPXP--GAPPXPXPPAXGGXPAG 727
P PP P T G P G P P G PP P PP GG G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +2
Query: 668 PXPGAPP----XPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPX 835
P PG PP P PP GG P GP P G P P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 836 PPXARXAQXXXGPXGPP 886
PP GP PP
Sbjct: 355 PPPPPPGGFKGGPPPPP 371
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/77 (28%), Positives = 25/77 (32%)
Frame = +3
Query: 234 GXSQVPPVXGXXGEXXHXXXGVXKPXGXWXPPGGXXGXPPXXXXXPXQXAWGXXPRXVGX 413
G S +PP+ G G+ G PP G PP P G P G
Sbjct: 285 GSSALPPITGGPPPPP----GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 340
Query: 414 GPXPXXPPXAGXXXLPP 464
P P PP PP
Sbjct: 341 PPPPPPPPGGCPPPPPP 357
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXX-PAFXXGXXXHPXP--GAPPXPXPPAXGGXPAG 727
P PP P T G P G P P G PP P PP GG G
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 32.3 bits (70), Expect = 0.50
Identities = 25/94 (26%), Positives = 26/94 (27%), Gaps = 1/94 (1%)
Frame = +2
Query: 638 PAFXXGXXXHPXPGAPPX-PXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEG 814
PA G P P P G P GP A AG G
Sbjct: 157 PAGPPGPAGPAGPKGPNGNPGSDGQPGAPGNNGNAGGPGAPGQAGQDGHPGNAGAPGAPG 216
Query: 815 XTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P A A GP GP +P A G
Sbjct: 217 RVNEVPGPAGAPGAPGPDGPAGPAGSPGAPGNPG 250
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 32.3 bits (70), Expect = 0.50
Identities = 23/86 (26%), Positives = 25/86 (29%), Gaps = 3/86 (3%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGXPA--GXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXP- 838
P PG+P P PP G P G GP P + G P
Sbjct: 184 PTPGSPGPPGPPGPPGYPGRQGCQGKDGPSGDPGLRFIKTPGPVGAAGPPGPPGPPGSPG 243
Query: 839 PXARXAQXXXGPXGPPRNPXAXXGSG 916
A GP GPP P G
Sbjct: 244 ENTEGAPGLDGPLGPPGKPGTPGTDG 269
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/91 (26%), Positives = 25/91 (27%)
Frame = -2
Query: 909 PXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXTRX 730
P G G P P A A G G G + GP
Sbjct: 178 PSGNAGADGQPGAPGNAGAAGAPGAPGPAGPDGQPGSTGQDGAPGVVEEVAVPAGPAGAP 237
Query: 729 XPAGXPPXAGGXGXGGAPGXGWXCXPXXKAG 637
PAG P G G G PG P AG
Sbjct: 238 GPAGAPGADGAAGAPGQPGQDGPQGPAGDAG 268
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 7/90 (7%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXG-------GXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXX 826
P P P P P G P GP A AG G
Sbjct: 162 PGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAGQDGHPGNAGAPGAPGKVNE 221
Query: 827 XPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P A A GP GP +P A G
Sbjct: 222 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPG 251
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 7/90 (7%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXG-------GXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXX 826
P P P P P G P GP A AG G
Sbjct: 224 PGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAGQDGHPGNAGAPGAPGKVNE 283
Query: 827 XPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P A A GP GP +P A G
Sbjct: 284 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPG 313
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 7/90 (7%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXG-------GXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXX 826
P P P P P G P GP A AG G
Sbjct: 161 PGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAGQDGHPGNAGAPGAPGKVNE 220
Query: 827 XPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P A A GP GP +P A G
Sbjct: 221 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPG 250
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 7/90 (7%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXG-------GXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXX 826
P P P P P G P GP A AG G
Sbjct: 161 PGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAGQDGHPGNAGAPGAPGKVNE 220
Query: 827 XPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P A A GP GP +P A G
Sbjct: 221 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPG 250
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 7/90 (7%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXG-------GXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXX 826
P P P P P G P GP A AG G
Sbjct: 162 PGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAGQDGHPGNAGAPGAPGKVNE 221
Query: 827 XPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P A A GP GP +P A G
Sbjct: 222 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPG 251
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.66
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 7/90 (7%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXG-------GXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXX 826
P P P P P G P GP A AG G
Sbjct: 162 PGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPGQAGQDGHPGNAGAPGAPGKVNE 221
Query: 827 XPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P A A GP GP +P A G
Sbjct: 222 VPGPAGAPGAPGPDGPAGPAGSPGAPGNPG 251
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.5 bits (68), Expect = 0.87
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -2
Query: 909 PXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXTRX 730
P G G P GP A A G G P GP
Sbjct: 208 PPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPKGPP 267
Query: 729 XPAGXPPXAGGXGXGGAPG 673
PAG P G G G PG
Sbjct: 268 GPAGQPGSDGNPGTAGPPG 286
Score = 28.7 bits (61), Expect = 6.2
Identities = 32/122 (26%), Positives = 34/122 (27%), Gaps = 4/122 (3%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPX-PGAPPXPXPPAX-GGXPAGXXRV 739
P P P G A PA G P G P P P G AG
Sbjct: 175 PDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAG 234
Query: 740 XGPXAXPX-AGXX-PXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGS 913
GP P AG P S P P + G GPP NP
Sbjct: 235 PGPAGPPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAGQPGSDGNPGTAGPPGNPGGEGEK 294
Query: 914 GV 919
G+
Sbjct: 295 GI 296
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/82 (25%), Positives = 21/82 (25%), Gaps = 1/82 (1%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA 847
P P PP P P PAG G A P P P P
Sbjct: 154 PCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGP 213
Query: 848 RXAQXXXGPXGP-PRNPXAXXG 910
P GP P P G
Sbjct: 214 AGESTYPEPAGPGPAGPPGPAG 235
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/109 (24%), Positives = 28/109 (25%), Gaps = 2/109 (1%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P P P G P G P P PP P PA G G
Sbjct: 150 PPCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPG 209
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA--RXAQXXXGPXGPP 886
P P + G P P A A GP GPP
Sbjct: 210 PDGPAGESTYPEPAGPGPAGPPGPA-GPPGPDGASPTAAPGAAGPPGPP 257
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 1/82 (1%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA 847
P PG PP P PA P G G A P P P
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGE 208
Query: 848 RXAQXXXGPXGP-PRNPXAXXG 910
A GP P P P G
Sbjct: 209 PGASEQGGPGEPGPAGPPGPAG 230
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = -2
Query: 915 PDPXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXT 736
P P G G P GP G G P+ G G
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAG-----PAGNDGAPGAPGGPGEPGASEQGGPG 218
Query: 735 RXXPAGXPPXAGGXGXGGAPGXG 667
PAG P AG G GAPG G
Sbjct: 219 EPGPAGPPGPAGPAGNDGAPGTG 241
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 1/82 (1%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA 847
P PG PP P PA P G G A P P P
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGE 208
Query: 848 RXAQXXXGPXGP-PRNPXAXXG 910
A GP P P P G
Sbjct: 209 PGASEQGGPGEPGPAGPPGPAG 230
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = -2
Query: 915 PDPXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXT 736
P P G G P GP G G P+ G G
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAG-----PAGNDGAPGAPGGPGEPGASEQGGPG 218
Query: 735 RXXPAGXPPXAGGXGXGGAPGXG 667
PAG P AG G GAPG G
Sbjct: 219 EPGPAGPPGPAGPAGNDGAPGTG 241
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 1/82 (1%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA 847
P PG PP P PA P G G A P P P
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGE 208
Query: 848 RXAQXXXGPXGP-PRNPXAXXG 910
A GP P P P G
Sbjct: 209 PGASEQGGPGEPGPAGPPGPAG 230
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = -2
Query: 915 PDPXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXT 736
P P G G P GP G G P+ G G
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAG-----PAGNDGAPGAPGGPGEPGASEQGGPG 218
Query: 735 RXXPAGXPPXAGGXGXGGAPGXG 667
PAG P AG G GAPG G
Sbjct: 219 EPGPAGPPGPAGPAGNDGAPGTG 241
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 1/82 (1%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA 847
P PG PP P PA P G G A P P P
Sbjct: 149 PCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGE 208
Query: 848 RXAQXXXGPXGP-PRNPXAXXG 910
A GP P P P G
Sbjct: 209 PGASEQGGPGEPGPAGPPGPAG 230
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = -2
Query: 915 PDPXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXT 736
P P G G P GP G G P+ G G
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGPAG-----PAGNDGAPGAPGGPGEPGASEQGGPG 218
Query: 735 RXXPAGXPPXAGGXGXGGAPGXG 667
PAG P AG G GAPG G
Sbjct: 219 EPGPAGPPGPAGPAGNDGAPGTG 241
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = -2
Query: 894 GFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXTRXXPAGX 715
G + GP GP G P G A G A GP G
Sbjct: 162 GGQPGPAGPAGPAGDAGAPGAPGQDGQPGAPGQDGHRSTGTPGAAG-APGPAGPAGQDGQ 220
Query: 714 PPXAGGXGXGGAPG 673
P AGG G GAPG
Sbjct: 221 PGSAGGPGEAGAPG 234
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/72 (30%), Positives = 23/72 (31%)
Frame = +2
Query: 674 PGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARX 853
PG PP P PP G P P P G P +G P PP R
Sbjct: 713 PGYPPAPPPPGVGPPP--------PQGIPPMGFDP-NKPPPPMFQQGFNAGAPPPPFGRG 763
Query: 854 AQXXXGPXGPPR 889
A PPR
Sbjct: 764 AGPMSSFPPPPR 775
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/84 (28%), Positives = 26/84 (30%), Gaps = 2/84 (2%)
Frame = +2
Query: 674 PGAPPXPXPPAXGGXPAGXXRVXGPXAXPX--AGXXPXXXXXXXSXXEGXTXXXPXPPXA 847
PG+P PP PAG GP P A P + P PP A
Sbjct: 182 PGSPGPRGPPG----PAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGA 237
Query: 848 RXAQXXXGPXGPPRNPXAXXGSGV 919
GP GP P GV
Sbjct: 238 PGNDGPPGPPGPKGAPGPDGPPGV 261
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +3
Query: 306 PXGXWXPPGGXXGXPPXXXXXPXQXAWGXXPRXVGXGPXPXXPPXAGXXXLPP 464
P G PP G G PP P A G P G P PP G PP
Sbjct: 70 PNGFIPPPPGPGGIPP----PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 777 GXXPAXGLAXGPXTRXXPAGXPPXAGGXGXGGAPG 673
G P G GP G PP GG G G PG
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 215
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 777 GXXPAXGLAXGPXTRXXPAGXPPXAGGXGXGGAPG 673
G P G GP G PP GG G G PG
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 495
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = +2
Query: 674 PGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARX 853
PGAP P A G P GP P A P G P P
Sbjct: 206 PGAPGTPGGNALPGPPGPP----GPQGPPGADGLPGNPGAPG--VPGQVIEVPGTPGPAG 259
Query: 854 AQXXXGPXGPPRNPXAXXGS 913
GP GPP P A S
Sbjct: 260 PPGPPGPIGPPGQPGAPGSS 279
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = +2
Query: 674 PGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARX 853
PG+P PP PAG GP P G + P PP
Sbjct: 177 PGSPGPRGPPG----PAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGP-PGPPGPPG 231
Query: 854 AQXXXGPXGPP 886
A GP GPP
Sbjct: 232 APGNDGPPGPP 242
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/81 (29%), Positives = 24/81 (29%)
Frame = -2
Query: 915 PDPXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXT 736
P P G G P P A G G V P P GP
Sbjct: 107 PGPAGPAGAPGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPP-------PCKPCPDGPAG 159
Query: 735 RXXPAGXPPXAGGXGXGGAPG 673
P G P AG G GAPG
Sbjct: 160 PPGPPGAPGDAGTNGAPGAPG 180
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/99 (24%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Frame = +2
Query: 629 LXXPAFXXGXXXHPX-PGAPPXPXPPAXGGXPA--GXXRVXGPXAXPXAGXXPXXXXXXX 799
L PA G +P PG P P P G P + P P
Sbjct: 106 LPGPAGPAGAPGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPG 165
Query: 800 SXXEGXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
+ + T P P GP GPP P + G
Sbjct: 166 APGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAPG 204
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/82 (28%), Positives = 26/82 (31%)
Frame = +2
Query: 674 PGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARX 853
PG P PP G AG G P A P + P PP A
Sbjct: 184 PGLPGPRGPPGPPGE-AGQPGPQGDAGTP-AQSEPLTPGAPGEAGDAGPAGPPGPPGAPG 241
Query: 854 AQXXXGPXGPPRNPXAXXGSGV 919
GP GP +P +GV
Sbjct: 242 NDGPPGPPGPKGSPGPDGPAGV 263
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = +2
Query: 674 PGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARX 853
PG+P PP PAG GP P G + P PP
Sbjct: 177 PGSPGPRGPPG----PAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGP-PGPPGPPG 231
Query: 854 AQXXXGPXGPP 886
A GP GPP
Sbjct: 232 APGNDGPPGPP 242
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = +2
Query: 674 PGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARX 853
PG P P G P G GP P P + G T PP
Sbjct: 203 PGESGEPGTPGSAG-PKGNAGPAGPPGPPGYPGRPGE-----TGDHGKTIAGEAPPGPPG 256
Query: 854 AQXXXGPXGPPRNP 895
Q GP GPP P
Sbjct: 257 RQGEMGPQGPPGPP 270
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA 847
P PG P P PP G P + P A P + G
Sbjct: 211 PPPGPPGPPGPPGNDGQPGAPGQDGQPGA-PGTNTVNSPGGPGPAGPPGPPGPPGQDGSG 269
Query: 848 RXAQ-XXXGPXGPPRNPXAXXGSG 916
AQ GP GPP N G G
Sbjct: 270 GAAQPGPPGPPGPPGNDGQPGGPG 293
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +2
Query: 596 PXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXGP 748
P G + P G PG P P PP G P G + GP
Sbjct: 248 PGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGP 298
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/83 (25%), Positives = 23/83 (27%), Gaps = 4/83 (4%)
Frame = +2
Query: 674 PGAPPXPXPPAXGGXPAGXXRVXGP---XAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPX 844
P PP P P PAG V GP P P + + P
Sbjct: 179 PAGPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPG 238
Query: 845 ARXAQXXXGPXGP-PRNPXAXXG 910
A P GP P P G
Sbjct: 239 APGTNTVNSPGGPGPAGPPGPPG 261
Score = 28.3 bits (60), Expect = 8.1
Identities = 36/154 (23%), Positives = 38/154 (24%), Gaps = 3/154 (1%)
Frame = -1
Query: 745 PADAXXPGXX-PPXRWGXRXGWRSGXXMXXXPXXKGXXX*XGXXAXPXXXXDPGXGGXPX 569
P A PG PP + G G P G G P PG G P
Sbjct: 251 PGPAGPPGPPGPPGQDGS-----GGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPG 305
Query: 568 GXPXKAPXXEDXPA*XGXGXGXXEXRXTXKXNTXRGGXXXXP--AXGGXXGXGPXPTXRG 395
P PA G G +T GG A GG G G G
Sbjct: 306 TDAAYCPCPPRTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGG 365
Query: 394 XXPXAXXXGXXXXXGGXPXXPPGGXQXPXGXXTP 293
G GG P P P
Sbjct: 366 GGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAP 399
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/82 (28%), Positives = 26/82 (31%)
Frame = +2
Query: 674 PGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARX 853
PG P PP G AG G P A P + P PP A
Sbjct: 184 PGLPGPRGPPGPPGE-AGQPGPQGDAGTP-AQSEPLTPGAPGEAGDAGPAGPPGPPGAPG 241
Query: 854 AQXXXGPXGPPRNPXAXXGSGV 919
GP GP +P +GV
Sbjct: 242 NDGPPGPPGPKGSPGPDGPAGV 263
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 747 GPXTRXXPAGXPPXAGGXGXGGAPG 673
GP PAG P GG G GAPG
Sbjct: 226 GPQGPPGPAGSPGAPGGPGQAGAPG 250
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/88 (28%), Positives = 26/88 (29%), Gaps = 8/88 (9%)
Frame = +2
Query: 677 GAPPXPXPPAXGGXP--------AGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXP 832
GAP P P G P AG GP P A P G
Sbjct: 159 GAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQ--PGSDAQSE 216
Query: 833 XPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P A GP GP +P A G G
Sbjct: 217 SSPGAPGQAGPQGPPGPAGSPGAPGGPG 244
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 747 GPXTRXXPAGXPPXAGGXGXGGAPG 673
GP PAG P GG G GAPG
Sbjct: 226 GPQGPPGPAGSPGAPGGPGQAGAPG 250
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/88 (28%), Positives = 26/88 (29%), Gaps = 8/88 (9%)
Frame = +2
Query: 677 GAPPXPXPPAXGGXP--------AGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXP 832
GAP P P G P AG GP P A P G
Sbjct: 159 GAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQ--PGSDAQSE 216
Query: 833 XPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P A GP GP +P A G G
Sbjct: 217 SSPGAPGQAGPQGPPGPAGSPGAPGGPG 244
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 747 GPXTRXXPAGXPPXAGGXGXGGAPG 673
GP PAG P GG G GAPG
Sbjct: 226 GPQGPPGPAGSPGAPGGPGQAGAPG 250
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/88 (28%), Positives = 26/88 (29%), Gaps = 8/88 (9%)
Frame = +2
Query: 677 GAPPXPXPPAXGGXP--------AGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXP 832
GAP P P G P AG GP P A P G
Sbjct: 159 GAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAPGQ--PGSDAQSE 216
Query: 833 XPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P A GP GP +P A G G
Sbjct: 217 SSPGAPGQAGPQGPPGPAGSPGAPGGPG 244
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 747 GPXTRXXPAGXPPXAGGXGXGGAPG 673
GP P G P AGG G GAPG
Sbjct: 221 GPPGPPGPGGPPGDAGGAGSDGAPG 245
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/81 (25%), Positives = 22/81 (27%)
Frame = -2
Query: 915 PDPXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXT 736
P P G G P P A GG G G G A P +
Sbjct: 160 PGPAGEPGHDGAPGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGS 219
Query: 735 RXXPAGXPPXAGGXGXGGAPG 673
G P G G G PG
Sbjct: 220 SSSEPGQPGPNGQPGPRGPPG 240
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = -2
Query: 915 PDPXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXT 736
P A G GG P A GG G P GP
Sbjct: 175 PGKPGAPGVGGGSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQ---PGPNG 231
Query: 735 RXXPAGXPPXAGGXGXGGAPG 673
+ P G P AG G G PG
Sbjct: 232 QPGPRGPPGQAGSPGGNGQPG 252
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/109 (24%), Positives = 28/109 (25%), Gaps = 2/109 (1%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG 745
P P P G P G P P PP P PA G G
Sbjct: 149 PPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPG 208
Query: 746 PXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA--RXAQXXXGPXGPP 886
P P + G P P A A GP GPP
Sbjct: 209 PDGPAGESTYPEPAAPGPAGPPGPA-GPPGPDGASPTAAPGAAGPPGPP 256
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/82 (24%), Positives = 20/82 (24%), Gaps = 1/82 (1%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXA 847
P P PP P P PAG G A P P P P
Sbjct: 153 PCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGP 212
Query: 848 RXAQXXXGPXGP-PRNPXAXXG 910
P P P P G
Sbjct: 213 AGESTYPEPAAPGPAGPPGPAG 234
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/94 (24%), Positives = 25/94 (26%), Gaps = 1/94 (1%)
Frame = +2
Query: 638 PAFXXGXXXHPXPGAPPXPXPPAXGGXPAGXXRVXG-PXAXPXAGXXPXXXXXXXSXXEG 814
PA G P +PP P P+ PAG G P AG
Sbjct: 170 PAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGP 229
Query: 815 XTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P G GPP P G
Sbjct: 230 PGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPG 263
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/95 (27%), Positives = 28/95 (29%), Gaps = 2/95 (2%)
Frame = +2
Query: 638 PAFXXGXXXHPX-PGAPPXPXPPAXGGXPAGXXR-VXGPXAXPXAGXXPXXXXXXXSXXE 811
PA G P PGAP P P G P + P P P +
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNP--GRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGD 164
Query: 812 GXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P A GP GPP P A G
Sbjct: 165 SGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPG 199
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/95 (27%), Positives = 28/95 (29%), Gaps = 2/95 (2%)
Frame = +2
Query: 638 PAFXXGXXXHPX-PGAPPXPXPPAXGGXPAGXXR-VXGPXAXPXAGXXPXXXXXXXSXXE 811
PA G P PGAP P P G P + P P P +
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNP--GRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGD 164
Query: 812 GXTXXXPXPPXARXAQXXXGPXGPPRNPXAXXGSG 916
P P A GP GPP P A G
Sbjct: 165 SGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPG 199
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.5
Identities = 31/117 (26%), Positives = 32/117 (27%), Gaps = 10/117 (8%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPX-----PPAXGGXP--- 721
P PP P A P G P G+PP P PP GG P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 722 -AG-XXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPP 886
AG P P G P G P P R A P G P
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = +2
Query: 653 GXXXHPXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXP 832
G P G+PP P PP AG P P AG P S T P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGS---GSPPPPPAAGSPP--PPRTGSPPPPPTGSPP 281
Query: 833 XPPXARXAQXXXGPXGPPRNP 895
PP PP P
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.5
Identities = 31/117 (26%), Positives = 32/117 (27%), Gaps = 10/117 (8%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPX-----PPAXGGXP--- 721
P PP P A P G P G+PP P PP GG P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 722 -AG-XXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPP 886
AG P P G P G P P R A P G P
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = +2
Query: 653 GXXXHPXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXP 832
G P G+PP P PP AG P P AG P S T P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGS---GSPPPPPAAGSPP--PPRTGSPPPPPTGSPP 302
Query: 833 XPPXARXAQXXXGPXGPPRNP 895
PP PP P
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.5
Identities = 31/117 (26%), Positives = 32/117 (27%), Gaps = 10/117 (8%)
Frame = +2
Query: 566 PXRXPPXXXVPXTXGXSAXXXLXXPAFXXGXXXHPXPGAPPXPX-----PPAXGGXP--- 721
P PP P A P G P G+PP P PP GG P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 722 -AG-XXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXPXPPXARXAQXXXGPXGPP 886
AG P P G P G P P R A P G P
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = +2
Query: 653 GXXXHPXPGAPPXPXPPAXGGXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGXTXXXP 832
G P G+PP P PP AG P P AG P S T P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGS---GSPPPPPAAGSPP--PPRTGSPPPPPTGSPP 287
Query: 833 XPPXARXAQXXXGPXGPPRNP 895
PP PP P
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPP 308
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 747 GPXTRXXPAGXPPXAGGXGXGGAPG 673
GP PAG P GG G GAPG
Sbjct: 226 GPQGPPGPAGSPGAPGGPGQPGAPG 250
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical
protein C50B6.4 protein.
Length = 291
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = -2
Query: 894 GFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXTRXXPAGX 715
G + GP GP G P G A G A GP G
Sbjct: 162 GGQPGPAGPAGPAGDAGAPGAPGQDGQPGAPGQDGQRSTGTPGAAG-APGPAGPAGQDGQ 220
Query: 714 PPXAGGXGXGGAPG 673
P GG G GAPG
Sbjct: 221 PGSDGGPGEAGAPG 234
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/81 (28%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXG-GXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGX----TXXXP 832
P P PP P A G G P + P A G G P
Sbjct: 120 PGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 179
Query: 833 XPPXARXAQXXXGPXGPPRNP 895
P A Q GP GPP P
Sbjct: 180 ITPGAPGPQGTPGPQGPPGQP 200
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/81 (28%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Frame = +2
Query: 668 PXPGAPPXPXPPAXG-GXPAGXXRVXGPXAXPXAGXXPXXXXXXXSXXEGX----TXXXP 832
P P PP P A G G P + P A G G P
Sbjct: 153 PGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212
Query: 833 XPPXARXAQXXXGPXGPPRNP 895
P A Q GP GPP P
Sbjct: 213 ITPGAPGPQGTPGPQGPPGQP 233
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/97 (25%), Positives = 27/97 (27%), Gaps = 4/97 (4%)
Frame = -2
Query: 915 PDPXXAXGFRGGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGL----AX 748
P P G G P A GG G G G A
Sbjct: 190 PGPPGPAGQAGRPGNDGQPGAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQ 249
Query: 747 GPXTRXXPAGXPPXAGGXGXGGAPGXGWXCXPXXKAG 637
G +R P G G G GAPG G+ P G
Sbjct: 250 GGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPG 286
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/83 (26%), Positives = 22/83 (26%)
Frame = -2
Query: 885 GGPXGPXXXWAXRAXGGXGXXXVXPSXXXXXXXXXXGXXPAXGLAXGPXTRXXPAGXPPX 706
GGP GP G G G G GP PAG P
Sbjct: 178 GGPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQPGRPG-PPGPRGEAGPAGQPGS 236
Query: 705 AGGXGXGGAPGXGWXCXPXXKAG 637
G G G PG P G
Sbjct: 237 PGNDGESGKPGNAGRPGPPGAPG 259
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.1
Identities = 45/176 (25%), Positives = 49/176 (27%), Gaps = 20/176 (11%)
Frame = -1
Query: 715 PPXRWGXRXGWRSGXXMXXXPXXKGXXX*XGXXAXPXXXXDPGXGGXP----XGXPXKA- 551
PP G WR G M P G G P P G P G P +
Sbjct: 1437 PPVMGGHEGSWRGGPPMRGMPPL-GMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPMRGG 1495
Query: 550 -PXXEDXPA*XG--XGXGXXEXRXTXKXNTXRGGXXXXPAXGGXXGXGP------XPTXR 398
P P G G G + ++ RGG P GG G GP P R
Sbjct: 1496 PPMRGGPPMFRGGPPGPGRGMPSPMMRGSSMRGG---FPQRGGGPGMGPSQYYHDSPQNR 1552
Query: 397 GXXPXA--XXXGXXXXXGGXPXXPPGGXQ----XPXGXXTPXXLXKXSPXXPXTGG 248
G G G P P GG P P L P P G
Sbjct: 1553 GPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNG 1608
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.135 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,169,759
Number of Sequences: 27780
Number of extensions: 260801
Number of successful extensions: 2672
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2306
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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