Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_B23
         (813 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    46   1e-04
BC041587-1|AAH41587.1|  669|Homo sapiens KRBA1 protein protein.        32   2.1  
BC033229-1|AAH33229.1|  669|Homo sapiens KRBA1 protein protein.        32   2.1  
AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens ...    29   4.1  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 20/29 (68%), Positives = 21/29 (72%)
 Frame = -2

Query: 674 DXXGSKSNVPMNXWXPQASYPXGNFXGTS 588
           D  GSKS+V MN W PQASYP GNF  TS
Sbjct: 6   DIEGSKSDVAMNAWPPQASYPCGNFSDTS 34


>BC041587-1|AAH41587.1|  669|Homo sapiens KRBA1 protein protein.
          Length = 669

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = -2

Query: 491 PREVSVXAELALGHLRYSLTDVPPPVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERN 312
           P + S      L  L   L ++P PV  PAW C     RG    RRA  PR+ +A  E +
Sbjct: 189 PGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGP---RRA-EPRNWTADKEGS 244

Query: 311 TVRP 300
             +P
Sbjct: 245 APKP 248


>BC033229-1|AAH33229.1|  669|Homo sapiens KRBA1 protein protein.
          Length = 669

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = -2

Query: 491 PREVSVXAELALGHLRYSLTDVPPPVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERN 312
           P + S      L  L   L ++P PV  PAW C     RG    RRA  PR+ +A  E +
Sbjct: 189 PGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGP---RRA-EPRNWTADKEGS 244

Query: 311 TVRP 300
             +P
Sbjct: 245 APKP 248


>AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45380 fis, clone BRHIP3020733. ).
          Length = 223

 Score = 29.1 bits (62), Expect(2) = 4.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 360 ATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR 262
           A S+ A +P C L   HR    + D   LPP+R
Sbjct: 154 APSLPAQAPWCLLSPGHRGATSLPDTMMLPPSR 186



 Score = 21.0 bits (42), Expect(2) = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 453 TPALFFDRCTAPSQTP 406
           TPAL+ D  + P+Q P
Sbjct: 147 TPALWVDAPSLPAQAP 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,991,430
Number of Sequences: 237096
Number of extensions: 2298994
Number of successful extensions: 7995
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7994
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)