Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_FL5_B07
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   233   2e-61
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   232   5e-61
AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD...   232   5e-61
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   232   5e-61
AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC...   209   4e-54
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   203   2e-52
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   203   2e-52

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  233 bits (570), Expect = 2e-61
 Identities = 103/131 (78%), Positives = 115/131 (87%)
 Frame = +1

Query: 4   WHFSXRLSSSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYK 183
           + F+    + MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYK
Sbjct: 2   FRFTRLKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYK 61

Query: 184 AGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVDVVGYIETPHGLRALLTVWAEHM 363
           AGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ V  VGYIETP GLRAL+ VWA+H+
Sbjct: 62  AGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHL 121

Query: 364 SEDCRRRFYKN 396
           SE+CRRRFYKN
Sbjct: 122 SEECRRRFYKN 132


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  232 bits (567), Expect = 5e-61
 Identities = 102/121 (84%), Positives = 111/121 (91%)
 Frame = +1

Query: 34  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
           MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVDVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
           DRPGSKINKKE+VEAVT++ETPPM+ V  VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 394 N 396
           N
Sbjct: 121 N 121


>AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD,
           isoform D protein.
          Length = 161

 Score =  232 bits (567), Expect = 5e-61
 Identities = 102/121 (84%), Positives = 111/121 (91%)
 Frame = +1

Query: 34  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
           MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVDVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
           DRPGSKINKKE+VEAVT++ETPPM+ V  VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 394 N 396
           N
Sbjct: 121 N 121


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  232 bits (567), Expect = 5e-61
 Identities = 102/121 (84%), Positives = 111/121 (91%)
 Frame = +1

Query: 34  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
           MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVDVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
           DRPGSKINKKE+VEAVT++ETPPM+ V  VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 394 N 396
           N
Sbjct: 121 N 121


>AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC,
           isoform C protein.
          Length = 125

 Score =  209 bits (510), Expect = 4e-54
 Identities = 91/112 (81%), Positives = 101/112 (90%)
 Frame = +1

Query: 73  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 253 EAVTIIETPPMVCVDVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNCSPL 408
           EAVT++ETPPM+ V  VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNCS +
Sbjct: 61  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNCSSI 112


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  203 bits (496), Expect = 2e-52
 Identities = 89/108 (82%), Positives = 98/108 (90%)
 Frame = +1

Query: 73  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 253 EAVTIIETPPMVCVDVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
           EAVT++ETPPM+ V  VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  203 bits (496), Expect = 2e-52
 Identities = 89/108 (82%), Positives = 98/108 (90%)
 Frame = +1

Query: 73  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 253 EAVTIIETPPMVCVDVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
           EAVT++ETPPM+ V  VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,403,472
Number of Sequences: 53049
Number of extensions: 563547
Number of successful extensions: 1196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)