Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_A08
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 34 0.74
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 32 2.3
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 32 2.3
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 32 2.3
AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing regula... 32 2.3
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 32 2.3
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 32 2.3
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 32 2.3
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 31 4.0
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 31 4.0
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 31 4.0
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 31 4.0
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 31 4.0
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 31 5.2
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 31 5.2
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 31 5.2
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 31 5.2
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 31 5.2
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 31 5.2
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 31 5.2
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 31 5.2
BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein. 31 6.9
BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein. 31 6.9
BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled ... 31 6.9
AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein. 31 6.9
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 30 9.1
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 30 9.1
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 30 9.1
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 30 9.1
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 30 9.1
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 30 9.1
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 30 9.1
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 30 9.1
BC042172-1|AAH42172.1| 184|Homo sapiens ZMYM6 protein protein. 30 9.1
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 30 9.1
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 30 9.1
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 30 9.1
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 33.9 bits (74), Expect = 0.74
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = +3
Query: 60 PFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---R 224
P LL +A + ++ L+ YD + P + VVN++L L N+
Sbjct: 7 PLLLLLLLAVCLGAQGRNQEERLLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 225 ESESTVRIQADLQMNWIDKRLSWN 296
E E + ++M W D RL W+
Sbjct: 67 EREEALTTNVWIEMQWCDYRLRWD 90
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 657 PAXGGXRVPXPXXXPPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXP 812
PA GG PPPG G+ R G P G AG G P
Sbjct: 16 PAGGGGGAGGAGGGPPPGPPGAGDRGGGGPCGGGPGGGSAGGPSQPPGGGGP 67
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 657 PAXGGXRVPXPXXXPPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXP 812
PA GG PPPG G+ R G P G AG G P
Sbjct: 16 PAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGP 67
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 645 LXXXPAXGGXRVPXPXXXPPPGEXGSPXRXXGAPXPG 755
L P GG + P PP GE SP +P PG
Sbjct: 99 LVPEPVPGGCQEPEEMSWPPSGEIASPPELPSSPPPG 135
>AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing
regulatory protein protein.
Length = 115
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 657 PAXGGXRVPXPXXXPPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXP 812
PA GG PPPG G+ R G P G AG G P
Sbjct: 16 PAGGGGGAGGAGGGPPPGPPGAGDRGGGGPCGGGPGGGSAGGPSQPPGGGGP 67
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 645 LXXXPAXGGXRVPXPXXXPPPGEXGSPXRXXGAPXPG 755
L P GG + P PP GE SP +P PG
Sbjct: 238 LVPEPVPGGCQEPEEMSWPPSGEIASPPELPSSPPPG 274
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 645 LXXXPAXGGXRVPXPXXXPPPGEXGSPXRXXGAPXPG 755
L P GG + P PP GE SP +P PG
Sbjct: 238 LVPEPVPGGCQEPEEMSWPPSGEIASPPELPSSPPPG 274
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 645 LXXXPAXGGXRVPXPXXXPPPGEXGSPXRXXGAPXPG 755
L P GG + P PP GE SP +P PG
Sbjct: 238 LVPEPVPGGCQEPEEMSWPPSGEIASPPELPSSPPPG 274
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 31.5 bits (68), Expect = 4.0
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = +3
Query: 60 PFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIR 224
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 225 ESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 323
E V L+ W+D L WN GGV H+
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHI 100
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 31.5 bits (68), Expect = 4.0
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = +3
Query: 60 PFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIR 224
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 225 ESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 323
E V L+ W+D L WN GGV H+
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHI 100
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 31.5 bits (68), Expect = 4.0
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = +3
Query: 60 PFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIR 224
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 225 ESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 323
E V L+ W+D L WN GGV H+
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHI 100
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 31.5 bits (68), Expect = 4.0
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = +3
Query: 60 PFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIR 224
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 225 ESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 323
E V L+ W+D L WN GGV H+
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHI 100
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 31.5 bits (68), Expect = 4.0
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = +3
Query: 60 PFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIR 224
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 225 ESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 323
E V L+ W+D L WN GGV H+
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHI 100
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 699 PPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXPPRKXSPP 833
PPPG G P G P G P G ++ P+K PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 699 PPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXPPRKXSPP 833
PPPG G P G P G P G ++ P+K PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 699 PPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXPPRKXSPP 833
PPPG G P G P G P G ++ P+K PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 699 PPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXPPRKXSPP 833
PPPG G P G P G P G ++ P+K PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 699 PPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXPPRKXSPP 833
PPPG G P G P G P G ++ P+K PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 699 PPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXPPRKXSPP 833
PPPG G P G P G P G ++ P+K PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 699 PPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXPPRKXSPP 833
PPPG G P G P G P G ++ P+K PP
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 305
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 699 PPPGEXGSPXRXXGAPXPGXXXPSXAGAXXSSXXGXXPPRKXSPP 833
PPPG G P G P G P G ++ P+K PP
Sbjct: 218 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPP 262
>BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 628 LPXXXTXXPPPPXXXXGSPXXXXXPPPGXTVPP 726
LP PPPP G P PP G +PP
Sbjct: 557 LPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPP 589
>BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 628 LPXXXTXXPPPPXXXXGSPXXXXXPPPGXTVPP 726
LP PPPP G P PP G +PP
Sbjct: 557 LPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPP 589
>BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled
associated activator of morphogenesis 2 protein.
Length = 662
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 628 LPXXXTXXPPPPXXXXGSPXXXXXPPPGXTVPP 726
LP PPPP G P PP G +PP
Sbjct: 151 LPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPP 183
>AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein.
Length = 1085
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 628 LPXXXTXXPPPPXXXXGSPXXXXXPPPGXTVPP 726
LP PPPP G P PP G +PP
Sbjct: 564 LPGGMLPPPPPPLPPGGPPPPPGPPPLGAIMPP 596
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 42 LILFWLPFLLTCAIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLH 203
L+LF+L A+ C A + ++D LL Y+ R + S+++ + L L
Sbjct: 7 LVLFFL-----VALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLS 61
Query: 204 LRHA-NIRESESTVRIQADLQMNWIDKRLSWNA 299
L ++ E E + L+ W D RL+WN+
Sbjct: 62 LAQLISVNEREQIMTTNVWLKQEWTDYRLTWNS 94
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 30.3 bits (65), Expect = 9.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 126 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 290
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 291 WN 296
W+
Sbjct: 92 WD 93
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 42 LILFWLPFLLTCAIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLH 203
L+LF+L A+ C A + ++D LL Y+ R + S+++ + L L
Sbjct: 7 LVLFFL-----VALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLS 61
Query: 204 LRHA-NIRESESTVRIQADLQMNWIDKRLSWNA 299
L ++ E E + L+ W D RL+WN+
Sbjct: 62 LAQLISVNEREQIMTTNVWLKQEWTDYRLTWNS 94
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 42 LILFWLPFLLTCAIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLH 203
L+LF+L A+ C A + ++D LL Y+ R + S+++ + L L
Sbjct: 7 LVLFFL-----VALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLS 61
Query: 204 LRHA-NIRESESTVRIQADLQMNWIDKRLSWNA 299
L ++ E E + L+ W D RL+WN+
Sbjct: 62 LAQLISVNEREQIMTTNVWLKQEWTDYRLTWNS 94
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 42 LILFWLPFLLTCAIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLH 203
L+LF+L A+ C A + ++D LL Y+ R + S+++ + L L
Sbjct: 7 LVLFFL-----VALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLS 61
Query: 204 LRHA-NIRESESTVRIQADLQMNWIDKRLSWNA 299
L ++ E E + L+ W D RL+WN+
Sbjct: 62 LAQLISVNEREQIMTTNVWLKQEWTDYRLTWNS 94
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 42 LILFWLPFLLTCAIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLH 203
L+LF+L A+ C A + ++D LL Y+ R + S+++ + L L
Sbjct: 7 LVLFFL-----VALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLS 61
Query: 204 LRHA-NIRESESTVRIQADLQMNWIDKRLSWNA 299
L ++ E E + L+ W D RL+WN+
Sbjct: 62 LAQLISVNEREQIMTTNVWLKQEWTDYRLTWNS 94
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 42 LILFWLPFLLTCAIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLH 203
L+LF+L A+ C A + ++D LL Y+ R + S+++ + L L
Sbjct: 7 LVLFFL-----VALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLS 61
Query: 204 LRHA-NIRESESTVRIQADLQMNWIDKRLSWNA 299
L ++ E E + L+ W D RL+WN+
Sbjct: 62 LAQLISVNEREQIMTTNVWLKQEWTDYRLTWNS 94
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 42 LILFWLPFLLTCAIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLH 203
L+LF+L A+ C A + ++D LL Y+ R + S+++ + L L
Sbjct: 7 LVLFFL-----VALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLS 61
Query: 204 LRHA-NIRESESTVRIQADLQMNWIDKRLSWNA 299
L ++ E E + L+ W D RL+WN+
Sbjct: 62 LAQLISVNEREQIMTTNVWLKQEWTDYRLTWNS 94
>BC042172-1|AAH42172.1| 184|Homo sapiens ZMYM6 protein protein.
Length = 184
Score = 30.3 bits (65), Expect = 9.1
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 660 AXGGXRVPXPXXXPP-PGEXGSPXRXXGAPXPGXXX-PSXAGAXXSSXXGXXPPRKXSPP 833
A VP P P PG G+P R AP PG P A + G PPR S P
Sbjct: 117 AAASYAVPGPGRLPAWPGAYGAP-RALPAPSPGWRAWPLPAWSTAGQARGWPPPRWPSRP 175
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 30.3 bits (65), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 42 LILFWLPFLLTCAIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLH 203
L+LF+L A+ C A + ++D LL Y+ R + S+++ + L L
Sbjct: 7 LVLFFL-----VALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLS 61
Query: 204 LRHA-NIRESESTVRIQADLQMNWIDKRLSWNA 299
L ++ E E + L+ W D RL+WN+
Sbjct: 62 LAQLISVNEREQIMTTNVWLKQEWTDYRLTWNS 94
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 42 LILFWLPFLLTCAIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLH 203
L+LF+L A+ C A + ++D LL Y+ R + S+++ + L L
Sbjct: 7 LVLFFL-----VALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLS 61
Query: 204 LRHA-NIRESESTVRIQADLQMNWIDKRLSWNA 299
L ++ E E + L+ W D RL+WN+
Sbjct: 62 LAQLISVNEREQIMTTNVWLKQEWTDYRLTWNS 94
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 30.3 bits (65), Expect = 9.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 126 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 290
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 291 WN 296
W+
Sbjct: 92 WD 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,490,366
Number of Sequences: 237096
Number of extensions: 2403980
Number of successful extensions: 9321
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 5894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8610
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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