Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_FL5_A05
(844 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 64 2e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 60 2e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 57 2e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 55 7e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 52 5e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 52 7e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 52 7e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 3e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 5e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 43 3e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 7e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 41 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 9e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 34 0.001
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 27 0.16
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 0.66
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 1.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 6.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 64.1 bits (149), Expect = 2e-12
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Frame = +3
Query: 84 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 242
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 243 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 416
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 417 VSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
+ G V W + + + + D QTC KFGS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 60.5 bits (140), Expect = 2e-11
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 275
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 276 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 446
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 447 KRLDISTPISMQLDNWXNDMQTCTFKFGS 533
RL I M L+N+ D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 60.1 bits (139), Expect = 3e-11
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Frame = +3
Query: 102 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 260
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 261 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 434
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 435 VSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
V W + + ++ + D QTC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.4 bits (135), Expect = 8e-11
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Frame = +3
Query: 129 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 293
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 467
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 468 PISMQLDNWXNDMQTCTFKFGS 533
+ ++ + D QTC KFGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 57.2 bits (132), Expect = 2e-10
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Frame = +3
Query: 75 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 233
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 234 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 407
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 408 ---RARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
+A + + G V W + + ++ + D QTC KFGS
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.2 bits (132), Expect = 2e-10
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Frame = +3
Query: 129 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 293
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 458
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 459 ISTPISMQLDNWXNDMQTCTFKFGS 533
+ + ++ + D Q+C KFGS
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGS 178
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 56.4 bits (130), Expect = 3e-10
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +3
Query: 180 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 353
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 354 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTF 521
PD+VL N A G+Y +R + + NG V W+ + ++ + + D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 522 KFGS 533
KFGS
Sbjct: 168 KFGS 171
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.0 bits (129), Expect = 4e-10
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Frame = +3
Query: 129 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 293
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 458
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 459 ISTPISMQLDNWXNDMQTCTFKFGS 533
+ S+ ++ + D+QTC K GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 55.2 bits (127), Expect = 7e-10
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Frame = +3
Query: 129 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 293
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 294 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 467
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 468 PISMQLDNWXNDMQTCTFKFGS 533
+ + + D Q C KFGS
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 55.2 bits (127), Expect = 7e-10
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Frame = +3
Query: 129 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 293
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 294 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 467
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 468 PISMQLDNWXNDMQTCTFKFGS 533
+ + + D Q C KFGS
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGS 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
G Y V++NGS ++ + + + + D Q C KFGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 53.6 bits (123), Expect = 2e-09
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
G Y V+++GS ++ + M + + D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
G Y V+++GS ++ + M + + D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
G Y V+++GS ++ + + + + D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 52.4 bits (120), Expect = 5e-09
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Frame = +3
Query: 81 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 245
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 246 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 419
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 420 SNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
NNG+ ++ + + + + D Q C KFGS
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
G Y V+++GS ++ + + + + D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
G Y V+++GS ++ + + + + D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +3
Query: 183 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 359
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 360 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
+L N A + VS+ G V W+ + + ++ + D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.2 bits (112), Expect = 5e-08
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +3
Query: 117 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 281
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 282 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 452
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 453 LDISTPISMQLDNWXNDMQTCTFKFGS 533
L I M+L N+ D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 102 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 266
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 267 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 437
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 438 SWIKRLDISTPISMQLDN--WXNDMQTCTFKFGS 533
+ TP+ + D+ W D+ CT S
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 48.0 bits (109), Expect = 1e-07
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +3
Query: 105 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 272
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 273 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 440
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 441 WIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
+ + + +W D C FGS
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGS 189
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 2e-06
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Frame = +3
Query: 129 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 287
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 288 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 452
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 453 LDISTPISMQLDNWXNDMQTCTFKFGS 533
+ ++ M L + D Q C+ + S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.2 bits (97), Expect = 3e-06
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 275
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 276 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 428
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 429 GSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
GS++ RL I+ M L + D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.9 bits (94), Expect = 7e-06
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 275
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 276 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 428
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 429 GSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
GS++ RL I+ M L + D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.7 bits (91), Expect = 2e-05
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Frame = +3
Query: 129 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 287
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 288 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 452
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 453 LDISTPISMQLDNWXNDMQTCTFKFGS 533
+ ++ M L + D Q C+ + S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.3 bits (85), Expect = 9e-05
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Frame = +3
Query: 132 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 299
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 300 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTP 470
E + +E++W PD N + D R R+S +GSV++ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 471 ISMQLDNWXNDMQTCTFKFGS 533
M L + D Q CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 34.3 bits (75), Expect = 0.001
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +3
Query: 273 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 425
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 426 NGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
+GS++ RL I+ M L + D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.006
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +3
Query: 105 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 269
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 270 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 440
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 441 WIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
++ R + +L+ + D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 32.3 bits (70), Expect = 0.006
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +3
Query: 105 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 269
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 270 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 440
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 441 WIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
++ R + +L+ + D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 32.3 bits (70), Expect = 0.006
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +3
Query: 105 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 269
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 270 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 440
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 441 WIKRLDISTPISMQLDNWXNDMQTCTFKFGS 533
++ R + +L+ + D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 27.5 bits (58), Expect = 0.16
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +3
Query: 183 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 356
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 357 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKFG 530
D ++ R+ NG+V+++ R + +L+ + D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 531 S 533
S
Sbjct: 257 S 257
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 698 PXXXPPXNPLXGRXPXXPXGXPASXXP 778
P P NP G P P G P S P
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 326 PSAAAPFPCVPTQS 285
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.6 bits (51), Expect = 1.2
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +3
Query: 183 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 344
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 345 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWXNDMQ 509
LW+PD LNA + AL + S+ N +V + R+ M+ + D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 510 TC 515
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 6.2
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWXNDMQ 509
+ +WRPD NA + T + + + ++ ++ +L + +M + +D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 510 TCTFKFGS 533
C + S
Sbjct: 176 ECKLQMES 183
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,321
Number of Sequences: 438
Number of extensions: 4789
Number of successful extensions: 88
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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