Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_P21
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-4|CAB07387.1| 117|Caenorhabditis elegans Hypothetical pr... 161 5e-40
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 31 0.71
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 31 0.71
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 28 6.6
>Z92834-4|CAB07387.1| 117|Caenorhabditis elegans Hypothetical
protein F39B2.6 protein.
Length = 117
Score = 161 bits (391), Expect = 5e-40
Identities = 73/98 (74%), Positives = 80/98 (81%)
Frame = -2
Query: 409 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 230
MT KRRN GR K RGHV +RCTNC RC PKDKAIKKFV+RNIVEAAAVRDI DAS Y
Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYT 60
Query: 229 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 116
+ LPKLY KLHYC++CAIHSKVVRNRS++ RR R PP
Sbjct: 61 QYALPKLYHKLHYCIACAIHSKVVRNRSREARRDRNPP 98
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -2
Query: 361 HVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL-PKLYAKLHYCV 185
H+K ++C NC+ +K+++ +IR+ E A ++ A +L P K H
Sbjct: 80 HLKEIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCSICKELFPSTSVKTHEWY 139
Query: 184 SCAIHSKVV-RNRSKKDRRIRTPPKS 110
C K++ + R K ++++ P S
Sbjct: 140 -CKNREKIIEKQRVSKILKVQSLPSS 164
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -2
Query: 361 HVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL-PKLYAKLHYCV 185
H+K ++C NC+ +K+++ +IR+ E A ++ A +L P K H
Sbjct: 198 HLKEIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCSICKELFPSTSVKTHEWY 257
Query: 184 SCAIHSKVV-RNRSKKDRRIRTPPKS 110
C K++ + R K ++++ P S
Sbjct: 258 -CKNREKIIEKQRVSKILKVQSLPSS 282
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 353 FNVTTSMLGA--SSITALTSHVSNLRSGEQRRITWRRAESQQIAARRCSTEHNTPPGTEV 526
FN T + SS + + V NL G++ IT S + +C+ N PPG +
Sbjct: 1559 FNATVEFVDVPQSSQSDICGQVINLERGKKNYITSPGYPSAYLPGIKCNFLINAPPGYHI 1618
Query: 527 VYRL 538
Y L
Sbjct: 1619 EYAL 1622
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 353 FNVTTSMLGA--SSITALTSHVSNLRSGEQRRITWRRAESQQIAARRCSTEHNTPPGTEV 526
FN T + SS + + V NL G++ IT S + +C+ N PPG +
Sbjct: 1559 FNATVEFVDVPQSSQSDICGQVINLERGKKNYITSPGYPSAYLPGIKCNFLINAPPGYHI 1618
Query: 527 VYRL 538
Y L
Sbjct: 1619 EYAL 1622
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 29.5 bits (63), Expect = 2.9
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +3
Query: 492 LPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKK----KTDSID---LRDPNGLR- 647
LPSTT RK +D + + E+Y ++ DA+ T S D ++D G+
Sbjct: 208 LPSTTYSNPRKRESDEEQ---KPEIYGKVQRGDAQTTTASPTSTHSPDHPGVKDRRGIAP 264
Query: 648 -RRVSRFE-CETRLVKSHCLXPPTLGAPQ*AYPC 743
RV R C RL +H + PT+ + +PC
Sbjct: 265 IERVLRCTLCNERLEDTHFVQCPTVSIHKFCFPC 298
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 29.5 bits (63), Expect = 2.9
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +3
Query: 492 LPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKK----KTDSID---LRDPNGLR- 647
LPSTT RK +D + + E+Y ++ DA+ T S D ++D G+
Sbjct: 235 LPSTTYSNPRKRESDEEQ---KPEIYGKVQRGDAQTTTASPTSTHSPDHPGVKDRRGIAP 291
Query: 648 -RRVSRFE-CETRLVKSHCLXPPTLGAPQ*AYPC 743
RV R C RL +H + PT+ + +PC
Sbjct: 292 IERVLRCTLCNERLEDTHFVQCPTVSIHKFCFPC 325
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 194 LLRVMRHPQQSCQEQIEERQKNPYSSQE*LP*GHVTSTGSAK 69
++ V + P +S ++ + QKN Y+S E GH TS+ +A+
Sbjct: 374 VINVYKEPSRSHANELYDSQKNQYTSHE----GHSTSSPTAE 411
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3
Query: 729 TVEPRE--SEAXNNXTLLVAFR-IQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQ 559
+V+PR+ N L+AF + A+ D EAHL+ +RC R H G +I Q
Sbjct: 1121 SVKPRKMLKVVDENEKFLLAFALVLRAKYDHEAHLNLVNRCMRNVC-KTHFGETVDEIFQ 1179
Query: 558 F 556
F
Sbjct: 1180 F 1180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,313,841
Number of Sequences: 27780
Number of extensions: 334497
Number of successful extensions: 1041
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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