Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_P09
         (798 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L44140-7|AAA92650.1|  157|Homo sapiens protein ( , complete cds'...    30   8.4  
J03589-1|AAA36790.1|  157|Homo sapiens protein ( Human ubiquitin...    30   8.4  
D86974-1|BAA13210.2|  884|Homo sapiens KIAA0220 protein.               30   8.4  
BX664739-2|CAI43235.1|  157|Homo sapiens ubiquitin-like 4 protein.     30   8.4  
BX664739-1|CAI43234.1|  180|Homo sapiens ubiquitin-like 4 protein.     30   8.4  
BC053589-1|AAH53589.1|  157|Homo sapiens ubiquitin-like 4A protein.    30   8.4  
BC043346-1|AAH43346.1|  157|Homo sapiens ubiquitin-like 4A protein.    30   8.4  

>L44140-7|AAA92650.1|  157|Homo sapiens protein ( , complete cds's.
           ).).
          Length = 157

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 77  EQMLSQEGWDLLTTARAPPKET*QLKSSCFANESTTGSESRPTEKIRRDTQRA 235
           E++L +EG +    A +PP +  QL S   A   +    SR  E+++RD +R+
Sbjct: 75  EKVLLEEG-EAQRLADSPPPQVWQLISKVLARHFSAADASRVLEQLQRDYERS 126


>J03589-1|AAA36790.1|  157|Homo sapiens protein ( Human
           ubiquitin-like protein (GdX) gene, complete cds. ).
          Length = 157

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 77  EQMLSQEGWDLLTTARAPPKET*QLKSSCFANESTTGSESRPTEKIRRDTQRA 235
           E++L +EG +    A +PP +  QL S   A   +    SR  E+++RD +R+
Sbjct: 75  EKVLLEEG-EAQRLADSPPPQVWQLISKVLARHFSAADASRVLEQLQRDYERS 126


>D86974-1|BAA13210.2|  884|Homo sapiens KIAA0220 protein.
          Length = 884

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
 Frame = -1

Query: 795 PRK*KXSRDXPAFIXGKFYP--MICXR-----SKCPFGTRXHFTNLHKARHDLRECGVRS 637
           P++   SR  P+   G+F+P  MI  R     S  PF T+ H   +  +RH    CG R 
Sbjct: 562 PQQMIISRHLPSVCGGRFHPQRMIISRHLPSVSSLPFHTQLHPQQMIISRHLPSVCGERL 621

Query: 636 RG 631
           RG
Sbjct: 622 RG 623


>BX664739-2|CAI43235.1|  157|Homo sapiens ubiquitin-like 4 protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 77  EQMLSQEGWDLLTTARAPPKET*QLKSSCFANESTTGSESRPTEKIRRDTQRA 235
           E++L +EG +    A +PP +  QL S   A   +    SR  E+++RD +R+
Sbjct: 75  EKVLLEEG-EAQRLADSPPPQVWQLISKVLARHFSAADASRVLEQLQRDYERS 126


>BX664739-1|CAI43234.1|  180|Homo sapiens ubiquitin-like 4 protein.
          Length = 180

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 77  EQMLSQEGWDLLTTARAPPKET*QLKSSCFANESTTGSESRPTEKIRRDTQRA 235
           E++L +EG +    A +PP +  QL S   A   +    SR  E+++RD +R+
Sbjct: 75  EKVLLEEG-EAQRLADSPPPQVWQLISKVLARHFSAADASRVLEQLQRDYERS 126


>BC053589-1|AAH53589.1|  157|Homo sapiens ubiquitin-like 4A protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 77  EQMLSQEGWDLLTTARAPPKET*QLKSSCFANESTTGSESRPTEKIRRDTQRA 235
           E++L +EG +    A +PP +  QL S   A   +    SR  E+++RD +R+
Sbjct: 75  EKVLLEEG-EAQRLADSPPPQVWQLISKVLARHFSAADASRVLEQLQRDYERS 126


>BC043346-1|AAH43346.1|  157|Homo sapiens ubiquitin-like 4A protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 77  EQMLSQEGWDLLTTARAPPKET*QLKSSCFANESTTGSESRPTEKIRRDTQRA 235
           E++L +EG +    A +PP +  QL S   A   +    SR  E+++RD +R+
Sbjct: 75  EKVLLEEG-EAQRLADSPPPQVWQLISKVLARHFSAADASRVLEQLQRDYERS 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,445,875
Number of Sequences: 237096
Number of extensions: 1984794
Number of successful extensions: 5962
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5962
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)