Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_P03
         (813 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p pro...    31   2.5  
AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-P...    31   2.5  
U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a prote...    29   5.7  
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.    29   10.0 

>AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p
           protein.
          Length = 337

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = -1

Query: 732 WRFXPXASSHXPLXFRVHQPDHQIPDSIHQPTPDLTSISINPLTPY*KEFAPGLKPPXSS 553
           W   P  +   P  +    P H   D+   P P+   +S NP  PY     PG+ PP   
Sbjct: 154 WNEAPPPAYQPPPGYYGWLPQH---DAFSGPAPNTVYMSDNP-PPY-----PGIAPPAHQ 204

Query: 552 EAPSAYLTPSS 520
            AP     PSS
Sbjct: 205 PAPQQPQAPSS 215


>AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-PA
           protein.
          Length = 427

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = -1

Query: 732 WRFXPXASSHXPLXFRVHQPDHQIPDSIHQPTPDLTSISINPLTPY*KEFAPGLKPPXSS 553
           W   P  +   P  +    P H   D+   P P+   +S NP  PY     PG+ PP   
Sbjct: 154 WNEAPPPAYQPPPGYYGWLPQH---DAFSGPAPNTVYMSDNP-PPY-----PGIAPPAHQ 204

Query: 552 EAPSAYLTPSS 520
            AP     PSS
Sbjct: 205 PAPQQPQAPSS 215


>U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a protein
           protein.
          Length = 1180

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 657 DSIHQPTPDLTSISINPLTPY*KEFAPGLKPPXSSEAPSA 538
           DS++ PT  L  +S NPL     +FAP   PP +  +P+A
Sbjct: 61  DSLNTPTTPLLGLSRNPL-----QFAPPPAPPIAVPSPAA 95


>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
          Length = 1966

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 19/66 (28%), Positives = 25/66 (37%)
 Frame = -1

Query: 687  RVHQPDHQIPDSIHQPTPDLTSISINPLTPY*KEFAPGLKPPXSSEAPSAYLTPSSLGMX 508
            R   P  Q P S+H P       +  P T       PG  PP   ++P A+ T    G+ 
Sbjct: 1142 RTSSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199

Query: 507  KGVSPP 490
                PP
Sbjct: 1200 GSGPPP 1205


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,140,165
Number of Sequences: 53049
Number of extensions: 651265
Number of successful extensions: 1989
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1979
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)