Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_P03
         (813 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-2|CAB00059.1|  474|Caenorhabditis elegans Hypothetical pr...    34   0.14 
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    28   6.9  

>Z75714-2|CAB00059.1|  474|Caenorhabditis elegans Hypothetical
           protein ZC434.3 protein.
          Length = 474

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -1

Query: 735 YWRFXPXASSHXPLXFRVHQPDHQIPDSIHQPTPDLTSISINPLTPY*KEFAPGL 571
           ++R    A    P  F+  Q D+ +P   +QP P   + S++PL P+  +++ GL
Sbjct: 25  FFRVKRQAYPPNPAPFKPRQEDYNLPP-FYQPNPGRDASSLSPLFPFHSQYSNGL 78


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 642 PTPDLTSISINPLTPY*KEFAPGLKPPXSSEAP-SAYLTPSSLGMXKGVSPPYFQVNDES 466
           PTP L  + I+P+     +F P + PP    +P  A   P++L      S P   V ++ 
Sbjct: 531 PTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNTYVPNQE 590

Query: 465 QASRLISR 442
                ++R
Sbjct: 591 SFDESVNR 598


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 642 PTPDLTSISINPLTPY*KEFAPGLKPPXSSEAP-SAYLTPSSLGMXKGVSPPYFQVNDES 466
           PTP L  + I+P+     +F P + PP    +P  A   P++L      S P   V ++ 
Sbjct: 531 PTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNTYVPNQE 590

Query: 465 QASRLISR 442
                ++R
Sbjct: 591 SFDESVNR 598


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
 Frame = -1

Query: 684 VHQPDHQIPDSIHQPTPDLTSISINPL--------TPY*KEFA-PGLKPPXSSEAPSAYL 532
           V QP H I  S   P PD   IS NP+        TP    +  P L PP ++ +P   L
Sbjct: 649 VQQPTHYIVPSQSSPPPDPYVIS-NPIPTLSPTAGTPSFNIYPYPSLPPPTTTISPLPTL 707

Query: 531 TPSSLGMXKGVSPPYFQVNDESQASRLISRHST 433
            P ++      SPP    N++S  SR I   +T
Sbjct: 708 LPPNISYV--TSPP---DNNDSPCSRSIYGDAT 735


>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
            protein M70.1 protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
 Frame = -1

Query: 660  PDSIHQPTPDLTSISINPLTPY*KEFAPGLKPPXS-SEAPSAYLTPSSL--GMXKGVSPP 490
            PD    PTP    + + P  P   E    +    + +E P   +TP          V   
Sbjct: 825  PDVPVNPTPQTAKVPVAPAPPAKDEKPKDVNVKKAETEKPKTEVTPKPAHKSAASKVDAT 884

Query: 489  YFQVNDESQASRLISRHSTHT 427
              +  D+S A   IS+  THT
Sbjct: 885  NTKTEDQSSAQNCISQSMTHT 905


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,065,979
Number of Sequences: 27780
Number of extensions: 316504
Number of successful extensions: 897
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)