Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_O11
         (812 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK057020-1|BAB71346.1|  133|Homo sapiens protein ( Homo sapiens ...    33   1.6  
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    31   6.5  

>AK057020-1|BAB71346.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32458 fis, clone SKNMC1000029. ).
          Length = 133

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +1

Query: 244 SDGFDENGDRCLNYLKAPLVDR--AGPR*RVLGDVDCFPFCPQDRECSYRRPR*EGSHVV 417
           +DG    GDRC      P  D+  AGP  R +    C  FCP    C++++P  EG    
Sbjct: 31  ADGMSSKGDRCCAAHTTPEPDKAPAGPLARSMSVQQC--FCP----CTFQKPSWEGMQPG 84

Query: 418 PLYRSGA 438
            L   GA
Sbjct: 85  RLLPDGA 91


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
 Frame = -1

Query: 344  STSPKTRHLGPARSTNGAFR*FKHRSPFSSNPSLATKGSTSKLTLRH-SPLSFS----PD 180
            ST  +T  L P  ST+     F   S  +  P++     TS LTL   S L+ S    P+
Sbjct: 3036 STEKETSFLSPTASTSRKTSLFLGPS-MARQPNILVHLQTSALTLSPTSTLNMSQEEPPE 3094

Query: 179  LLSGSRF-RSGGRFCEARLLLGFVLATSSGLSPVSSPTKVKATLK 48
            L S        G   E + L      T + L PVSSPT+  A  K
Sbjct: 3095 LTSSQTIAEEEGTTAETQTLTFTPSETPTSLLPVSSPTEPTARRK 3139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,907,987
Number of Sequences: 237096
Number of extensions: 2352478
Number of successful extensions: 8145
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8145
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)