Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_N24
         (892 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    29   6.5  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    29   6.5  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   8.6  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   8.6  

>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/59 (28%), Positives = 18/59 (30%)
 Frame = +2

Query: 536 KXQXNXPXXXXPXXXXXXXPXAPXGTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPP 712
           K     P    P       P  P GT   +P P PPP   P            Y PP P
Sbjct: 207 KGSKGPPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYP--YPPYPYPPPGP 263


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/59 (28%), Positives = 18/59 (30%)
 Frame = +2

Query: 536 KXQXNXPXXXXPXXXXXXXPXAPXGTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPP 712
           K     P    P       P  P GT   +P P PPP   P            Y PP P
Sbjct: 209 KGSKGPPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYP--YPPYPYPPPGP 265


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/74 (28%), Positives = 22/74 (29%)
 Frame = +2

Query: 554 PXXXXPXXXXXXXPXAPXGTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPPXFXXFXX 733
           P    P       P AP   P  +P P  PPA  P            Y P PP       
Sbjct: 290 PQPTAPVPEYGPPPPAPPAGPTYQPRPPAPPAPAPG---------PTYQPRPPAPPAPAP 340

Query: 734 XRXXXXRPPXPHXP 775
                 RPP P  P
Sbjct: 341 GPTYQPRPPSPPAP 354


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/74 (28%), Positives = 22/74 (29%)
 Frame = +2

Query: 554 PXXXXPXXXXXXXPXAPXGTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPPXFXXFXX 733
           P    P       P AP   P  +P P  PPA  P            Y P PP       
Sbjct: 290 PQPTAPVPEYGPPPPAPPAGPTYQPRPPAPPAPAPG---------PTYQPRPPAPPAPAP 340

Query: 734 XRXXXXRPPXPHXP 775
                 RPP P  P
Sbjct: 341 GPTYQPRPPSPPAP 354


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,154,951
Number of Sequences: 53049
Number of extensions: 501346
Number of successful extensions: 8830
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7121
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)