Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_N24
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.21
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.21
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 7.8
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 593 PXAPX-GTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPP 712
P AP GTP RP PPP P + APPPP
Sbjct: 593 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 633
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 593 PXAPX-GTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPP 712
P AP GTP RP PPP P + APPPP
Sbjct: 419 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 459
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +2
Query: 554 PXXXXPXXXXXXXPXAPXGTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPP 712
P P P P G P + P PPP P L + PPPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPP---PPGGLPPISGGPPPPPPPP 765
Score = 23.8 bits (49), Expect(2) = 7.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 439 PPPPPPP 419
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 7.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 439 PPPPPPP 419
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 22.6 bits (46), Expect(2) = 7.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 448 GXXPPPPPP 422
G PPPPPP
Sbjct: 724 GGPPPPPPP 732
Score = 22.6 bits (46), Expect(2) = 7.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 448 GXXPPPPPP 422
G PPPPPP
Sbjct: 740 GGPPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +2
Query: 554 PXXXXPXXXXXXXPXAPXGTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPP 712
P P P P G P + P PPP P L + PPPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPP---PPGGLPPISGGPPPPPPPP 765
Score = 23.8 bits (49), Expect(2) = 7.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 439 PPPPPPP 419
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 7.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 439 PPPPPPP 419
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 22.6 bits (46), Expect(2) = 7.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 448 GXXPPPPPP 422
G PPPPPP
Sbjct: 724 GGPPPPPPP 732
Score = 22.6 bits (46), Expect(2) = 7.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 448 GXXPPPPPP 422
G PPPPPP
Sbjct: 740 GGPPPPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +2
Query: 554 PXXXXPXXXXXXXPXAPXGTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPP 712
P P P P G P + P PPP P L + PPPP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPP---PPGGLPPISGGPPPPPPPP 348
Score = 23.8 bits (49), Expect(2) = 8.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 439 PPPPPPP 419
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 23.8 bits (49), Expect(2) = 8.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 439 PPPPPPP 419
PPPPPPP
Sbjct: 367 PPPPPPP 373
Score = 22.6 bits (46), Expect(2) = 8.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 448 GXXPPPPPP 422
G PPPPPP
Sbjct: 307 GGPPPPPPP 315
Score = 22.6 bits (46), Expect(2) = 8.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 448 GXXPPPPPP 422
G PPPPPP
Sbjct: 323 GGPPPPPPP 331
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +2
Query: 599 APXGTPXLRPXPXPPPAXXPAXXLXXLXXXXXYAPPPPXFXXFXXXRXXXXRPPXPH 769
AP T P P PPP PA + APPPP PP P+
Sbjct: 18 APAATTPQPPPPPPPP--KPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPY 72
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 626 PXPXPPPAXXPAXXLXXLXXXXXYAPPPPXFXXFXXXRXXXXRPPXPHXP 775
P P PPPA P + PPPP + PP PH P
Sbjct: 108 PAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYP--------PPPPHYP 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,859,656
Number of Sequences: 27780
Number of extensions: 194281
Number of successful extensions: 2186
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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