Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_N23
         (808 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.83 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.5  
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    22   5.8  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   7.7  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 347  CIAAALHVTPSDCLSHDERLTQ 282
            CI + + V+P   LS+DE++ Q
Sbjct: 1242 CIGSQIMVSPETLLSYDEKMDQ 1263


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 594 FSEHVDNGHFQTLSDSFVSMFVLLTSANFPDV 499
           F+E V   HF  + +     F+L  S NFP +
Sbjct: 222 FTEDVGLNHFYFMLNHNYPPFMLSNSLNFPQI 253


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 594 FSEHVDNGHFQTLSDSFVSMFVLLTSANFPDV 499
           F+E V   HF  + +     F+L  S NFP +
Sbjct: 222 FTEDVGLNHFYFMLNHNYPPFMLSNSLNFPQI 253


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -2

Query: 468 YALFXILYIITVLYVLMNLMLAVVYETFTRIEREKCRALLLHRRGATRH 322
           Y ++  L    +  +LM+L+   +Y    R  RE+ R   ++   +TRH
Sbjct: 196 YVIYSSLGSFFIPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTRH 244


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -2

Query: 468 YALFXILYIITVLYVLMNLMLAVVYETFTRIEREKCRALLLHRRGATRH 322
           Y ++  L    +  +LM+L+   +Y    R  RE+ R   ++   +TRH
Sbjct: 196 YVIYSSLGSFFIPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTRH 244


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -2

Query: 468 YALFXILYIITVLYVLMNLMLAVVYETFTRIEREKCRALLLHRRGATRH 322
           Y ++  L    +  +LM+L+   +Y    R  RE+ R   ++   +TRH
Sbjct: 196 YVIYSSLGSFFIPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTRH 244


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +1

Query: 463 CVPLRLGIRWHHHIWEVCRSQQNKHTNE*VTKRLEVSIVYVL 588
           CVP R   R  +  ++    ++  H N  +T+R  + I + L
Sbjct: 4   CVPERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHAL 45


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = -2

Query: 606 GFYLFSEHVDNGHFQTLSDSFVSMFVLLTSANFPDVMMPSYAKSKWY 466
           GF +   H+D    + + D  V +    TS  +  + +P+    K+Y
Sbjct: 174 GFQVDLRHIDEIRGKNVVDIGVDLSEFYTSVEWDILEVPAVRNEKFY 220


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,268
Number of Sequences: 438
Number of extensions: 3983
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)