Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_N13
(807 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.4
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 28 1.8
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 28 1.8
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.1
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 3.1
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 27 4.1
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 27 4.1
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.5
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 5.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 7.2
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.6
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.6
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 25 9.6
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 25 9.6
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 25 9.6
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -3
Query: 703 PSPXISGTSTRSSN---PRFHTPTTPDLTSIS-INPLTPY*KEFAPGLKP 566
P P IS T+T SS H PTTPD ++ + L P +P KP
Sbjct: 273 PKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKP 322
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/77 (24%), Positives = 29/77 (37%)
Frame = -3
Query: 709 KPPSPXISGTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 530
+PPS + + + P P P + + NP TP+ P + A + L
Sbjct: 245 RPPSMALLPSKQSTYWPALAAPVYPSMKDVPNNPFTPF-SPINPYYAKSWNHTASAPLLP 303
Query: 529 PSSLGMAKGVSPPYFQV 479
P G+ G PY V
Sbjct: 304 P---GLKNGSDYPYLSV 317
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 691 ISGTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGM 512
+ T T S+NP T I N + K F+ PP++++ P +L P+S
Sbjct: 684 LPATVTTSANPLGFKSTIQRPIPIKNNEDSDSCKAFSQA--PPIATKKPPTFLKPNSPEY 741
Query: 511 AKGVSP 494
AK V P
Sbjct: 742 AKTVIP 747
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 255 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 160
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -1
Query: 354 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 175
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 174 LSASIQASLPSSEIYRQL 121
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = -3
Query: 697 PXISGTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 518
P I S+ SS P P P + PL P + P PP APS P L
Sbjct: 325 PPIGNGSSNSSLPP--PPPPPRSNAAGSIPLPPQGRSAPP---PPPPRSAPSTGRQPPPL 379
Query: 517 GMAKGVSPP 491
++ VS P
Sbjct: 380 SSSRAVSNP 388
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 106 MTRIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 216
+T ++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 30 ITPLHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 118 YQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 228
Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 118 YKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 26.6 bits (56), Expect = 4.1
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = -3
Query: 700 SPXISGTSTRSS-NPRFHTPTTPDLTSISINPLTP-----Y*KEFAPGLKPPLSSEAPSA 539
SP +S S +P P+TP + SI+P TP Y + A L PLS + +A
Sbjct: 284 SPELSADKVLSHCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTA 343
Query: 538 YL 533
YL
Sbjct: 344 YL 345
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 465 KLRALLVVIPRILRSPPPTHPLIEDV 388
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 5.5
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = -3
Query: 682 TSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKG 503
TST ++ +TP +S ++N TP P++S TP + A
Sbjct: 1592 TSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALN 1651
Query: 502 VSPP 491
SPP
Sbjct: 1652 TSPP 1655
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = -3
Query: 700 SPXISGTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS 521
S + TST ++ +TP +S +N TP A P++S + TP +
Sbjct: 1718 SSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1777
Query: 520 LGMAKGVSPP 491
A S P
Sbjct: 1778 SSTALNTSTP 1787
Score = 25.4 bits (53), Expect = 9.6
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = -3
Query: 682 TSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKG 503
TST ++ +TP +S +N TP A PP++S TP +
Sbjct: 1616 TSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVN 1675
Query: 502 VSPP 491
S P
Sbjct: 1676 TSTP 1679
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 700 SPXISGTSTRSSNPRFHTPTTPDLTSIS 617
S IS +ST N FH PT TS S
Sbjct: 801 SRTISTSSTNEYNTSFHAPTVSSTTSSS 828
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 330 LVTHKELALKVSSIIGTRVYVFDPSCY 250
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 470 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 384
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 25.4 bits (53), Expect = 9.6
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 655 FHTPTTPDLTSISINPLTP-Y*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQV 479
FHTPT P T +S +P + + PLS +A S LT S L + SPP V
Sbjct: 139 FHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS--LTSSPLKDFQS-SPPLSTV 195
Query: 478 NDESQA 461
+S +
Sbjct: 196 LQKSHS 201
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 25.4 bits (53), Expect = 9.6
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = -3
Query: 172 LCIYSSFSPFLRDLPPVGRSSS---CFFRLLWSLRKXL--IPYSSQFWVVSFIAL 23
LC+ S+F P +R P+ SS F++L+ + K L +P + F F+ +
Sbjct: 520 LCVTSAFMPAIRSPSPINFLSSMFIAFYKLMPIISKHLNELPIIASFDYTFFVRI 574
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.4 bits (53), Expect = 9.6
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -3
Query: 709 KPPSPXISGTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 530
+PPSP I R+S F +PT S+ + + G+ P SS A A+L+
Sbjct: 494 RPPSPGIVTPPQRTSPSFFVSPTESTRQSLDSRRSFEHSTSSSSGISPSHSS-ASLAHLS 552
Query: 529 PSS 521
+S
Sbjct: 553 QAS 555
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,031,428
Number of Sequences: 5004
Number of extensions: 61246
Number of successful extensions: 264
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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