Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_N06
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   7.4  
06_03_0775 - 24510624-24510655,24511228-24512179                       28   7.4  
07_01_0684 - 5161218-5161427,5161509-5161616,5162217-5162390,516...    28   9.8  
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881...    28   9.8  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 793 PPPPPPXQKKXXFXXPP 743
           PPPPPP   K  F  PP
Sbjct: 549 PPPPPPSGNKPAFSPPP 565


>06_03_0775 - 24510624-24510655,24511228-24512179
          Length = 327

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 793 PPPPPPXQKKXXFXXPP 743
           PPPPPP QK      PP
Sbjct: 183 PPPPPPKQKAKAITAPP 199


>07_01_0684 -
           5161218-5161427,5161509-5161616,5162217-5162390,
           5162515-5162643,5162722-5163009,5163114-5163346,
           5164235-5165060
          Length = 655

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 15  MKRWVRRKLGAPRGISKSXPXPAA 86
           MK WV+R +G P+ +  S P P A
Sbjct: 298 MKWWVKRLIGRPKDVHISWPYPFA 321


>02_02_0307 -
           8809724-8811589,8811681-8811762,8812130-8812242,
           8812361-8812492,8812681-8812864,8813002-8813135,
           8813552-8813656,8813738-8813839,8813930-8814022,
           8814136-8814456,8814595-8814696,8814791-8814853,
           8815213-8815708,8815964-8816124,8816213-8816743,
           8817077-8817118,8817203-8817334,8817639-8817703,
           8817858-8818169,8818262-8818334,8818425-8818517,
           8819440-8819501,8819740-8819809
          Length = 1777

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/53 (28%), Positives = 16/53 (30%)
 Frame = -3

Query: 695 PPPXKXXXXXXXXXXXXXPXXXGGXXXGGGGGXXXXXPPKKKKXFFXXGKXHH 537
           PPP                   GG   GGGGG     PP K   F+      H
Sbjct: 145 PPPPPPASPDAAKTPGSPAGGGGGVGAGGGGGEEPMYPPPKLGQFYEFFSFSH 197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,110,614
Number of Sequences: 37544
Number of extensions: 356346
Number of successful extensions: 4745
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3733
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)