BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_M14
(824 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 38 0.033
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 38 0.033
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 38 0.033
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 38 0.033
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 38 0.033
AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein pr... 33 1.7
AC080162-1|AAY14856.1| 635|Homo sapiens unknown protein. 33 1.7
AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein. 33 1.7
AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein. 33 1.7
BC039878-1|AAH39878.1| 825|Homo sapiens chromosome 14 open read... 31 5.1
BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine phosph... 31 6.7
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph... 31 6.7
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein. 31 6.7
BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein. 31 6.7
AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein pr... 31 6.7
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph... 31 6.7
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph... 31 6.7
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 30 8.8
AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. 30 8.8
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 30 8.8
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 30 8.8
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 30 8.8
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 38.3 bits (85), Expect = 0.033
Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = -3
Query: 711 QATPPLXXRXHQ-PDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGL--KPPXSSEAPS 541
Q PP HQ P H P QPPP S P+ APG+ PP SS AP
Sbjct: 75 QQPPPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSAPPASSSAPP 133
Query: 540 AYLTPSSLGMXKGVSP 493
A TP + G G P
Sbjct: 134 A--TPPTSGAPPGSGP 147
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 38.3 bits (85), Expect = 0.033
Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = -3
Query: 711 QATPPLXXRXHQ-PDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGL--KPPXSSEAPS 541
Q PP HQ P H P QPPP S P+ APG+ PP SS AP
Sbjct: 75 QQPPPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSTPPASSSAPP 133
Query: 540 AYLTPSSLGMXKGVSP 493
A TP + G G P
Sbjct: 134 A--TPPTSGAPPGSGP 147
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 38.3 bits (85), Expect = 0.033
Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = -3
Query: 711 QATPPLXXRXHQ-PDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGL--KPPXSSEAPS 541
Q PP HQ P H P QPPP S P+ APG+ PP SS AP
Sbjct: 75 QQPPPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSAPPASSSAPP 133
Query: 540 AYLTPSSLGMXKGVSP 493
A TP + G G P
Sbjct: 134 A--TPPTSGAPPGSGP 147
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 38.3 bits (85), Expect = 0.033
Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = -3
Query: 711 QATPPLXXRXHQ-PDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGL--KPPXSSEAPS 541
Q PP HQ P H P QPPP S P+ APG+ PP SS AP
Sbjct: 2 QQPPPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSAPPASSSAPP 60
Query: 540 AYLTPSSLGMXKGVSP 493
A TP + G G P
Sbjct: 61 A--TPPTSGAPPGSGP 74
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 38.3 bits (85), Expect = 0.033
Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = -3
Query: 711 QATPPLXXRXHQ-PDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGL--KPPXSSEAPS 541
Q PP HQ P H P QPPP S P+ APG+ PP SS AP
Sbjct: 75 QQPPPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSAPPASSSAPP 133
Query: 540 AYLTPSSLGMXKGVSP 493
A TP + G G P
Sbjct: 134 A--TPPTSGAPPGSGP 147
>AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein
protein.
Length = 439
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -3
Query: 759 HPXIXXNXXGGXALXHQATPPLXXRXHQPDHQSPDSIHQPPP 634
HP + Q PP HQP HQ P HQPPP
Sbjct: 27 HPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQ-HQPPP 67
>AC080162-1|AAY14856.1| 635|Homo sapiens unknown protein.
Length = 635
Score = 32.7 bits (71), Expect = 1.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 678 QPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGV 499
Q P ++H P P L S NPLTP P K P EA S P+ G+ +
Sbjct: 447 QRSSSDPPAVHPPLPPLRVTSTNPLTP--TPPPPVAKTPSVMEALSQPSKPAPPGISQIR 504
Query: 498 SPP 490
PP
Sbjct: 505 PPP 507
>AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein.
Length = 439
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -3
Query: 759 HPXIXXNXXGGXALXHQATPPLXXRXHQPDHQSPDSIHQPPP 634
HP + Q PP HQP HQ P HQPPP
Sbjct: 27 HPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQ-HQPPP 67
>AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.
Length = 1022
Score = 32.7 bits (71), Expect = 1.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 678 QPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGV 499
Q P ++H P P L S NPLTP P K P EA S P+ G+ +
Sbjct: 834 QRSSSDPPAVHPPLPPLRVTSTNPLTP--TPPPPVAKTPSVMEALSQPSKPAPPGISQIR 891
Query: 498 SPP 490
PP
Sbjct: 892 PPP 894
>BC039878-1|AAH39878.1| 825|Homo sapiens chromosome 14 open reading
frame 155 protein.
Length = 825
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -3
Query: 675 PDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGVS 496
P ++P + PP + + P P +E ++PP + EAP+ P + V
Sbjct: 614 PAEEAPAEVQPPPAEEAPAEVQP--PPAEETPAEVQPPPAEEAPAEVQPPPAEEAPAEVQ 671
Query: 495 PP 490
PP
Sbjct: 672 PP 673
>BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -3
Query: 678 QPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGV 499
+P P S+ + P + S S PL+ E + P EAPS+ SSL + +
Sbjct: 466 EPPGLPPASLPESTP-IPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLELLASL 524
Query: 498 SPPYFQVNDESQASRLISRHS 436
+P F ++ + + +S+H+
Sbjct: 525 TPEAFSLDSSLRGKQRMSKHN 545
>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 1636
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -3
Query: 678 QPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGV 499
+P P S+ + P + S S PL+ E + P EAPS+ SSL + +
Sbjct: 1525 EPPGLPPASLPESTP-IPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLELLASL 1583
Query: 498 SPPYFQVNDESQASRLISRHS 436
+P F ++ + + +S+H+
Sbjct: 1584 TPEAFSLDSSLRGKQRMSKHN 1604
>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
Length = 1320
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -3
Query: 678 QPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGV 499
+P P S+ + P + S S PL+ E + P EAPS+ SSL + +
Sbjct: 1209 EPPGLPPASLPESTP-IPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLELLASL 1267
Query: 498 SPPYFQVNDESQASRLISRHS 436
+P F ++ + + +S+H+
Sbjct: 1268 TPEAFSLDSSLRGKQRMSKHN 1288
>BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein.
Length = 619
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -3
Query: 678 QPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGV 499
+P P S+ + P + S S PL+ E + P EAPS+ SSL + +
Sbjct: 508 EPPGLPPASLPESTP-IPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLELLASL 566
Query: 498 SPPYFQVNDESQASRLISRHS 436
+P F ++ + + +S+H+
Sbjct: 567 TPEAFSLDSSLRGKQRMSKHN 587
>AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein
protein.
Length = 990
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -3
Query: 678 QPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGV 499
+P P S+ + P + S S PL+ E + P EAPS+ SSL + +
Sbjct: 879 EPPGLPPASLPESTP-IPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLELLASL 937
Query: 498 SPPYFQVNDESQASRLISRHS 436
+P F ++ + + +S+H+
Sbjct: 938 TPEAFSLDSSLRGKQRMSKHN 958
>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
TD14 protein.
Length = 1636
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -3
Query: 678 QPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGV 499
+P P S+ + P + S S PL+ E + P EAPS+ SSL + +
Sbjct: 1525 EPPGLPPASLPESTP-IPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLELLASL 1583
Query: 498 SPPYFQVNDESQASRLISRHS 436
+P F ++ + + +S+H+
Sbjct: 1584 TPEAFSLDSSLRGKQRMSKHN 1604
>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
HD-PTP protein.
Length = 1636
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -3
Query: 678 QPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMXKGV 499
+P P S+ + P + S S PL+ E + P EAPS+ SSL + +
Sbjct: 1525 EPPGLPPASLPESTP-IPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLELLASL 1583
Query: 498 SPPYFQVNDESQASRLISRHS 436
+P F ++ + + +S+H+
Sbjct: 1584 TPEAFSLDSSLRGKQRMSKHN 1604
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 609 PLTPX*KEFAPGLKPPXSSEAP-SAYLTPSSL 517
P TP E +P PP S P SA+LTPSSL
Sbjct: 211 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 242
>AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein.
Length = 416
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 609 PLTPX*KEFAPGLKPPXSSEAP-SAYLTPSSL 517
P TP E +P PP S P SA+LTPSSL
Sbjct: 54 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 85
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 609 PLTPX*KEFAPGLKPPXSSEAP-SAYLTPSSL 517
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 609 PLTPX*KEFAPGLKPPXSSEAP-SAYLTPSSL 517
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 609 PLTPX*KEFAPGLKPPXSSEAP-SAYLTPSSL 517
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,453,727
Number of Sequences: 237096
Number of extensions: 2208723
Number of successful extensions: 5620
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5533
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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