Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_M14
         (824 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021448-1|AAX33596.1|  754|Drosophila melanogaster GH02239p pro...    29   7.7  
BT003316-1|AAO25076.1|  754|Drosophila melanogaster GH01676p pro...    29   7.7  
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.    29   7.7  
AE014296-1430|ABC66159.1|  754|Drosophila melanogaster CG17352-P...    29   7.7  
AE014296-1429|AAN12000.1|  965|Drosophila melanogaster CG17352-P...    29   7.7  

>BT021448-1|AAX33596.1|  754|Drosophila melanogaster GH02239p
           protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
 Frame = -3

Query: 675 PDHQSPDSIHQPPPDLTSISIN-PLTPX*KEFAPGLK--PPXSSEAPSAYLTPSSLGMXK 505
           P+  + D +H P PD  S   N P       F   L   P   S    A LTP      +
Sbjct: 589 PEAFTSDELHLPYPDFLSYGTNLPHERSSSNFGSELSRDPSSYSVGKRARLTPEDTSGSE 648

Query: 504 GVSPPYFQVNDESQASRLISRHSTHT 427
            ++    Q N   Q+  ++  H  H+
Sbjct: 649 TITQEMEQSNQTLQSHVIVESHPNHS 674


>BT003316-1|AAO25076.1|  754|Drosophila melanogaster GH01676p
           protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
 Frame = -3

Query: 675 PDHQSPDSIHQPPPDLTSISIN-PLTPX*KEFAPGLK--PPXSSEAPSAYLTPSSLGMXK 505
           P+  + D +H P PD  S   N P       F   L   P   S    A LTP      +
Sbjct: 589 PEAFTSDELHLPYPDFLSYGTNLPHERSSSNFGSELSRDPSSYSVGKRARLTPEDTSGSE 648

Query: 504 GVSPPYFQVNDESQASRLISRHSTHT 427
            ++    Q N   Q+  ++  H  H+
Sbjct: 649 TITQEMEQSNQTLQSHVIVESHPNHS 674


>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
          Length = 1966

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 19/66 (28%), Positives = 25/66 (37%)
 Frame = -3

Query: 687  RXHQPDHQSPDSIHQPPPDLTSISINPLTPX*KEFAPGLKPPXSSEAPSAYLTPSSLGMX 508
            R   P  Q P S+H P       +  P T       PG  PP   ++P A+ T    G+ 
Sbjct: 1142 RTSSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199

Query: 507  KGVSPP 490
                PP
Sbjct: 1200 GSGPPP 1205


>AE014296-1430|ABC66159.1|  754|Drosophila melanogaster CG17352-PD,
           isoform D protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
 Frame = -3

Query: 675 PDHQSPDSIHQPPPDLTSISIN-PLTPX*KEFAPGLK--PPXSSEAPSAYLTPSSLGMXK 505
           P+  + D +H P PD  S   N P       F   L   P   S    A LTP      +
Sbjct: 589 PEAFTSDELHLPYPDFLSYGTNLPHERSSSNFGSELSRDPSSYSVGKRARLTPEDTSGSE 648

Query: 504 GVSPPYFQVNDESQASRLISRHSTHT 427
            ++    Q N   Q+  ++  H  H+
Sbjct: 649 TITQEMEQSNQTLQSHVIVESHPNHS 674


>AE014296-1429|AAN12000.1|  965|Drosophila melanogaster CG17352-PA,
            isoform A protein.
          Length = 965

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
 Frame = -3

Query: 675  PDHQSPDSIHQPPPDLTSISIN-PLTPX*KEFAPGLK--PPXSSEAPSAYLTPSSLGMXK 505
            P+  + D +H P PD  S   N P       F   L   P   S    A LTP      +
Sbjct: 800  PEAFTSDELHLPYPDFLSYGTNLPHERSSSNFGSELSRDPSSYSVGKRARLTPEDTSGSE 859

Query: 504  GVSPPYFQVNDESQASRLISRHSTHT 427
             ++    Q N   Q+  ++  H  H+
Sbjct: 860  TITQEMEQSNQTLQSHVIVESHPNHS 885


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,683,734
Number of Sequences: 53049
Number of extensions: 683597
Number of successful extensions: 1996
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1987
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)