Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_M06
         (836 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016474-1|AAH16474.1|  753|Homo sapiens CCR4-NOT transcription ...    31   6.8  
AL133647-1|CAB63766.1|  571|Homo sapiens hypothetical protein pr...    31   6.8  
AK160386-1|BAD18729.1|  613|Homo sapiens FLJ00420 protein protein.     31   6.8  
AF180474-1|AAF29828.1|  609|Homo sapiens Not3p protein.                31   6.8  
AB014591-1|BAA31666.2|  762|Homo sapiens KIAA0691 protein protein.     31   6.8  

>BC016474-1|AAH16474.1|  753|Homo sapiens CCR4-NOT transcription
           complex, subunit 3 protein.
          Length = 753

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 36  VPPLKPWGPPRKGKXLKNXPGNLGXXKPNXGP 131
           VPP  P GPP     L   PGN G   P   P
Sbjct: 319 VPPTYPSGPPPAASALSTTPGNNGVPAPAAPP 350


>AL133647-1|CAB63766.1|  571|Homo sapiens hypothetical protein
           protein.
          Length = 571

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 36  VPPLKPWGPPRKGKXLKNXPGNLGXXKPNXGP 131
           VPP  P GPP     L   PGN G   P   P
Sbjct: 138 VPPTYPSGPPPAASALSTTPGNNGVPAPAAPP 169


>AK160386-1|BAD18729.1|  613|Homo sapiens FLJ00420 protein protein.
          Length = 613

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 36  VPPLKPWGPPRKGKXLKNXPGNLGXXKPNXGP 131
           VPP  P GPP     L   PGN G   P   P
Sbjct: 243 VPPTYPSGPPPAASALSTTPGNNGVPAPAAPP 274


>AF180474-1|AAF29828.1|  609|Homo sapiens Not3p protein.
          Length = 609

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 36  VPPLKPWGPPRKGKXLKNXPGNLGXXKPNXGP 131
           VPP  P GPP     L   PGN G   P   P
Sbjct: 319 VPPTYPSGPPPAASALSTTPGNNGVPAPAAPP 350


>AB014591-1|BAA31666.2|  762|Homo sapiens KIAA0691 protein protein.
          Length = 762

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 36  VPPLKPWGPPRKGKXLKNXPGNLGXXKPNXGP 131
           VPP  P GPP     L   PGN G   P   P
Sbjct: 328 VPPTYPSGPPPAASALSTTPGNNGVPAPAAPP 359


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,929,083
Number of Sequences: 237096
Number of extensions: 1521282
Number of successful extensions: 15893
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9923
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)