Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_M04
         (827 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794...    31   1.1  
09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061...    30   2.6  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    29   3.4  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.0  
01_06_0604 + 30536172-30537143                                         28   7.9  

>11_02_0065 -
           7938007-7938393,7939292-7939435,7940597-7940665,
           7940762-7940809,7941488-7941584,7941688-7941767,
           7941841-7941912,7942256-7942350,7943903-7943984,
           7945176-7945209,7945255-7945262,7945657-7946058
          Length = 505

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 363 PPPPPXFXF*KKXXGGGGGGXP 428
           PPPPP F +     GGGG G P
Sbjct: 80  PPPPPPFEYYPAVGGGGGFGAP 101



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 421 PPPPPPXXFF*KXKXGGGGG 362
           PPPPPP  ++     GGGGG
Sbjct: 80  PPPPPPFEYY--PAVGGGGG 97


>09_04_0368 +
           17005231-17005437,17005707-17005963,17006061-17006115,
           17006196-17006276,17006357-17006453,17006560-17006627,
           17006788-17006886,17007008-17007049,17007124-17007263,
           17007882-17008018,17008275-17008444
          Length = 450

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 363 PPPPPXFXF*KKXXGGGGGGXP 428
           PPPPP      +  GGGGGG P
Sbjct: 17  PPPPPPGSSSGRGGGGGGGGDP 38



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 421 PPPPPPXXFF*KXKXGGGGG 362
           PPPPPP     +   GGGGG
Sbjct: 17  PPPPPPGSSSGRGGGGGGGG 36


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 421 PPPPPPXXFF*KXKXGGGGGXXPXXXXPP 335
           PPPPPP       + GGGGG       PP
Sbjct: 9   PPPPPPPQHPPPPQAGGGGGGEFYRGPPP 37


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 450 PPXXXXKGGXPPPPP 406
           PP    KGG PPPPP
Sbjct: 368 PPPGGKKGGPPPPPP 382


>01_06_0604 + 30536172-30537143
          Length = 323

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 421 PPPPPPXXFF*KXKXGGGGG 362
           PPPPPP  F    + GG GG
Sbjct: 43  PPPPPPLAFPSYSRLGGAGG 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,768,876
Number of Sequences: 37544
Number of extensions: 364648
Number of successful extensions: 3792
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3407
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)