Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_L23
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    25   4.5  
U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical pr...    23   8.1  
U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical pr...    23   8.2  
U58748-7|AAM97987.1|  399|Caenorhabditis elegans Hypothetical pr...    23   8.3  

>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 25.4 bits (53), Expect(2) = 4.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 648 PPPPPPXFFF 619
           PPPPPP F F
Sbjct: 580 PPPPPPSFMF 589



 Score = 21.4 bits (43), Expect(2) = 4.5
 Identities = 8/21 (38%), Positives = 8/21 (38%)
 Frame = -1

Query: 693 PPXXXXKKKKXXXXXPPPPPP 631
           PP             PPPPPP
Sbjct: 523 PPMPGMAPLSTGAPTPPPPPP 543


>U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical
           protein ZK180.5a protein.
          Length = 542

 Score = 23.0 bits (47), Expect(2) = 8.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 652 GXPPPPPP 629
           G PPPPPP
Sbjct: 63  GAPPPPPP 70



 Score = 23.0 bits (47), Expect(2) = 8.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 646 PPPPPPXF 623
           PPPPPP F
Sbjct: 67  PPPPPPAF 74


>U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK180.5b protein.
          Length = 497

 Score = 23.0 bits (47), Expect(2) = 8.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 652 GXPPPPPP 629
           G PPPPPP
Sbjct: 63  GAPPPPPP 70



 Score = 23.0 bits (47), Expect(2) = 8.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 646 PPPPPPXF 623
           PPPPPP F
Sbjct: 67  PPPPPPAF 74


>U58748-7|AAM97987.1|  399|Caenorhabditis elegans Hypothetical
           protein ZK180.5c protein.
          Length = 399

 Score = 23.0 bits (47), Expect(2) = 8.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 652 GXPPPPPP 629
           G PPPPPP
Sbjct: 63  GAPPPPPP 70



 Score = 23.0 bits (47), Expect(2) = 8.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 646 PPPPPPXF 623
           PPPPPP F
Sbjct: 67  PPPPPPAF 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,922,776
Number of Sequences: 27780
Number of extensions: 69598
Number of successful extensions: 1610
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)