Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_L22
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.013
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.013
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.051
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 31 0.62
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 0.62
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 1.9
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 1.9
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 2.5
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 2.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 2.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 2.5
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 2.5
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 2.5
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 2.5
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 2.5
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 2.5
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 2.5
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 2.5
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 2.5
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 2.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGXN 175
PP P + PP P G + G + PP PP PP G + PP PG
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP---PPPSRFGPPGMGGMPP-PPPPGMR 342
Query: 174 WEKG-PPPFKXLFFGKGP 124
+ G PPP + GP
Sbjct: 343 YPGGMPPPPPPRYPSAGP 360
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = -2
Query: 261 PPXXVPPKKXKXPPPXGXLNXGPPAPGXN-WEKGPPP 154
PP V P PP G PP P W PPP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 302
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGXN 175
PP P + PP P G + G + PP PP PP G + PP PG
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP---PPPSRFGPPGMGGMPP-PPPPGMR 352
Query: 174 WEKG-PPPFKXLFFGKGP 124
+ G PPP + GP
Sbjct: 353 YPGGMPPPPPPRYPSAGP 370
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = -2
Query: 261 PPXXVPPKKXKXPPPXGXLNXGPPAPGXN-WEKGPPP 154
PP V P PP G PP P W PPP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 312
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.051
Identities = 31/112 (27%), Positives = 33/112 (29%), Gaps = 3/112 (2%)
Frame = -2
Query: 480 PXGGGXXXGEGXPPPRFFXXXXXGKXNXXXKK-NXGGKKFXXGPPXXPXXFFFWVAPPXP 304
P GG G PPP+ F + F P P F PP
Sbjct: 339 PQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAF--APPPSA 396
Query: 303 CGXSAGVFSLXXXEPPXXVPPKKXKX--PPPXGXLNXGPPAPGXNWEKGPPP 154
G G PP P PP G GPP PG GPPP
Sbjct: 397 FGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 371 KNFXXXPPXPPXXFFFGWXPPXLVGKARGFFPXXXXSPPXGSPQKKXXTPPQ 216
+ F PP P + G+ PP + G PP G+PQ+ PPQ
Sbjct: 291 QQFGGPPPSGPPSEYGGYAPPQQQQQQFG------APPPQGAPQQGFGAPPQ 336
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPP----KKXKXPPPXGXLNXGPPA 187
PP P PP P G PP +PP PPP G PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 186 PGXNWEKGPPP 154
P ++ GPPP
Sbjct: 776 PPGGFKGGPPP 786
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/78 (32%), Positives = 27/78 (34%)
Frame = -2
Query: 357 GPPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGX 178
GPP P PP P G+ + PP PP PP G PP PG
Sbjct: 712 GPPPPPGLPPITGGPPPP-PPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGG 767
Query: 177 NWEKGPPPFKXLFFGKGP 124
PPP F G P
Sbjct: 768 CPPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPP---KKXKXPPPXGXLNXGPPAP 184
PP P P P G+ + PP PP PPP G GPP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPP----KKXKXPPPXGXLNXGPPA 187
PP P PP P G PP +PP PPP G PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 186 PGXNWEKGPPP 154
P ++ GPPP
Sbjct: 776 PPGGFKGGPPP 786
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/78 (32%), Positives = 27/78 (34%)
Frame = -2
Query: 357 GPPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGX 178
GPP P PP P G+ + PP PP PP G PP PG
Sbjct: 712 GPPPPPGLPPITGGPPPP-PPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGG 767
Query: 177 NWEKGPPPFKXLFFGKGP 124
PPP F G P
Sbjct: 768 CPPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPP---KKXKXPPPXGXLNXGPPAP 184
PP P P P G+ + PP PP PPP G GPP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPP----KKXKXPPPXGXLNXGPPA 187
PP P PP P G PP +PP PPP G PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 186 PGXNWEKGPPP 154
P ++ GPPP
Sbjct: 359 PPGGFKGGPPP 369
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/78 (32%), Positives = 27/78 (34%)
Frame = -2
Query: 357 GPPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGX 178
GPP P PP P G+ + PP PP PP G PP PG
Sbjct: 295 GPPPPPGLPPITGGPPPP-PPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGG 350
Query: 177 NWEKGPPPFKXLFFGKGP 124
PPP F G P
Sbjct: 351 CPPPPPPPPPGGFKGGPP 368
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPP---KKXKXPPPXGXLNXGPPAP 184
PP P P P G+ + PP PP PPP G GPP P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -2
Query: 243 PKKXKXPPPXGXLNXGPP--APGXNWEKGPPPFK 148
P + PPP N GPP P W++ PPP++
Sbjct: 34 PLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWR 67
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 0.62
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAP--- 184
PP P F APP P G+ PP V P + PP G PP P
Sbjct: 695 PPGVPPMFNL-NAPPPP-----GIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQ 748
Query: 183 -GXNWEKGPPPF 151
G N PPPF
Sbjct: 749 QGFNAGAPPPPF 760
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/73 (28%), Positives = 28/73 (38%)
Frame = -2
Query: 375 GKKFXXGPPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXG 196
G++ G P F + PP G G E PP++ + PPP + G
Sbjct: 552 GREDAEGAQFGPSKSF--LGPPTTGGSLLGPSQPRPQEFRSVPPPQQQQGPPP-NWRHQG 608
Query: 195 PPAPGXNWEKGPP 157
PP G GPP
Sbjct: 609 PPMSGPGQGYGPP 621
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -2
Query: 357 GPPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGX 178
GPP P ++ PP P G G PP PP++ + PP GPP P
Sbjct: 679 GPPPPPQGQQYYGGPPPP-GQPYG--------PPGGYPPQQQR-PPYQAQPYPGPPPPQQ 728
Query: 177 NWEKGPPP 154
G PP
Sbjct: 729 QRGYGYPP 736
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -2
Query: 357 GPPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGX 178
GPP P ++ PP P G G PP PP++ + PP GPP P
Sbjct: 679 GPPPPPQGQQYYGGPPPP-GQPYG--------PPGGYPPQQQR-PPYQAQPYPGPPPPQQ 728
Query: 177 NWEKGPPP 154
G PP
Sbjct: 729 QRGYGYPP 736
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGXN 175
PP P +PP C +F+ P PP PP + GP P
Sbjct: 1045 PPLAPPQSNNNKSPPQAC-----LFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVP 1099
Query: 174 WEKGPPP 154
K PPP
Sbjct: 1100 VRKAPPP 1106
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGXN 175
PP P +PP C +F+ P PP PP + GP P
Sbjct: 1039 PPLAPPQSNNNKSPPQAC-----LFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVP 1093
Query: 174 WEKGPPP 154
K PPP
Sbjct: 1094 VRKAPPP 1100
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 258 PXXVPPKKXKXPPPXGXLNXGPPAPGXNWEKGPPPF 151
P VPP+ P G + GP PG GPPPF
Sbjct: 106 PGGVPPQAQPFNPHGGSMFGGPGGPG-----GPPPF 136
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 258 PXXVPPKKXKXPPPXGXLNXGPPAPGXNWEKGPPPF 151
P VPP+ P G + GP PG GPPPF
Sbjct: 386 PGGVPPQAQPFNPHGGSMFGGPGGPG-----GPPPF 416
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGXN 175
PP P +PP C +F+ P PP PP + GP P
Sbjct: 1045 PPLAPPQSNNNKSPPQAC-----LFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVP 1099
Query: 174 WEKGPPP 154
K PPP
Sbjct: 1100 VRKAPPP 1106
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGXN 175
PP P +PP C +F+ P PP PP + GP P
Sbjct: 1039 PPLAPPQSNNNKSPPQAC-----LFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVP 1093
Query: 174 WEKGPPP 154
K PPP
Sbjct: 1094 VRKAPPP 1100
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 276 LXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPG 181
L +PP PP PP G + GPPAPG
Sbjct: 1275 LLKKKPPLQPPPPPQMTGPPIG-IYPGPPAPG 1305
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGXN 175
PP P +PP C +F+ P PP PP + GP P
Sbjct: 1039 PPLAPPQSNNNKSPPQAC-----LFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVP 1093
Query: 174 WEKGPPP 154
K PPP
Sbjct: 1094 VRKAPPP 1100
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = -2
Query: 354 PPXXPXXFFFWVAPPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGXN 175
PP P +PP C +F+ P PP PP + GP P
Sbjct: 1045 PPLAPPQSNNNKSPPQAC-----LFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVP 1099
Query: 174 WEKGPPP 154
K PPP
Sbjct: 1100 VRKAPPP 1106
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -2
Query: 261 PPXXVPPKKXKXPPPXGXLNXGPPA-PGXNWEKGPPPF 151
PP +PP PPP L P A P GPPPF
Sbjct: 95 PPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF 132
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -2
Query: 261 PPXXVPPKKXKXPPPXGXLNXGPPA-PGXNWEKGPPPF 151
PP +PP PPP L P A P GPPPF
Sbjct: 118 PPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF 155
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -2
Query: 261 PPXXVPPKKXKXPPPXGXLNXGPPA-PGXNWEKGPPPF 151
PP +PP PPP L P A P GPPPF
Sbjct: 368 PPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF 405
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 276 LXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPG 181
L +PP PP PP G + GPPAPG
Sbjct: 1275 LLKKKPPLQPPPPPQMTGPPIG-IYPGPPAPG 1305
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Frame = -2
Query: 354 PPXXPXXFFFWVAP-PXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGX 178
PP P AP P P G+ + PP PP P G PP P
Sbjct: 488 PPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPP--PPMPGMAPLSTGAPTPPPPPPVG 545
Query: 177 NWEKGPPP 154
GPPP
Sbjct: 546 MANGGPPP 553
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -2
Query: 315 PPXPCGXSAGVFSLXXXEPPXXVPPKKXKXPPPXGXLNXGPPAPGXNWEKGPP 157
PP P AG S PP PP+ + PPP PP + ++ PP
Sbjct: 125 PPPPRKSRAGGSS-----PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = -2
Query: 315 PPXPCGXSAGVFSLXXXEPPXXV--PPKKXKXPPPXGXLNXGPPAPGXNWEKGPPP 154
PP PC F + +PP + PP PPP + PP P PPP
Sbjct: 22 PPPPC------FGIGCNQPPIVIAGPPPCFDCPPP-APIFVAPPPPPCFGPACPPP 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,770,904
Number of Sequences: 27780
Number of extensions: 250852
Number of successful extensions: 774
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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