Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_L20
(821 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.021
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.028
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.037
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 33 0.049
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.049
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.065
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.26
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.35
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 27 2.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 3.1
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 7.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 7.4
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 9.8
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.021
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 475 PPXXXGXXPPPPPXXXPQPXXPPPXXXVPXXXPXAP 582
PP PPPPP P P PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 32.3 bits (70), Expect = 0.086
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 471 PPPXPXGXXXPPPPXXPPTTXPPPPXRXXPXXXSXGP 581
P P P PPPP PP PP P S P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 473 PPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSP 601
PP PPPP P PP P P P P +P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 30.7 bits (66), Expect = 0.26
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 472 PPPXXXGXXPPPPPXXXPQPXXPPPXXXVPXXXPXAPS 585
PPP PPPP P P PP P APS
Sbjct: 1707 PPPPPMSV--PPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Score = 29.1 bits (62), Expect = 0.80
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 470 PPPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRP 586
PPPP P P P PPPP + P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.028
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXG--XXXPPPPXXPPTTXPPPPXRX 554
PP P P PP+ G P P P PPP PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 555 XPXXXSXGPVP 587
P + PVP
Sbjct: 1210 VPPPSTAPPVP 1220
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXGXXXPPPPXXPPTTXPPPPXRXXP 560
PP P G PP+ P P P G P P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 561 XXXSXGPVP 587
VP
Sbjct: 1181 VPKPAAGVP 1189
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXGXXXPPPPXXPPTTXPPPPXRXXP 560
PP P G PP+ P P P P P PPP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 561 XXXSXGPVP 587
VP
Sbjct: 1200 VPKPSVGVP 1208
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXGXXXPPPPXXPPTTXPPPP 545
PP P P PP+ P P P G PP P PP P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG---APPVPKPSVAAPPVP 1134
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 474 PPXPXGXXXPPPPXXPPTTXPPPPXRXXPXXXSXGPVP 587
PP P PP P PT+ PP P + PVP
Sbjct: 1032 PPIPVPSTAPPVPI--PTSTPPVPKSSSGAPSAPPPVP 1067
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXGXXXPPPPXXPPTTXPPPP 545
PP P G PP+ P P P G PP P PP P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG---APPVPKPSVAAPPVP 1153
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 418 PXGGGGXPPFXKRXGXKXPPPXXXGXXPPPPPXXXPQPXXPPPXXXVPXXXPXA 579
P G PP P G P PPP P P P P P A
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP-PVPTPSAGLPPVPVPTA 1234
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXGXXXPPPPXXPPTTXPPPP 545
PP P P G PP+ PP P PP P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP---STAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/64 (25%), Positives = 19/64 (29%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXGXXXPPPPXXPPTTXPPPPXRXXP 560
PP P P G PP+ PP P P P ++ P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTA--KAPPVPAPSSEAPSVSTPRSSVPSPHSNASP 1265
Query: 561 XXXS 572
S
Sbjct: 1266 SPTS 1269
Score = 25.4 bits (53), Expect = 9.8
Identities = 19/71 (26%), Positives = 20/71 (28%), Gaps = 2/71 (2%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGG-XXPPPXPXGXXXPPPPXXPPTTXPPPPXRXX 557
PP P P PP+ G P P P P PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 558 PXXXS-XGPVP 587
P S PVP
Sbjct: 1172 PAPSSGIPPVP 1182
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 433 GXPPFXKRXGXKXPPPXXXGXXPPPPPXXXPQPXXPPPXXXVPXXXP 573
G PP K P P G P P P P P P P P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPS-VAAPPVPAPSGAPPVPKP 1164
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +2
Query: 470 PPPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXGG 610
PP P PP P P P P P V +P G
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.037
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXGXXXP-PPPXXPPTTXPPPP 545
PP P A PP GG PPP P G PPP PP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP--PP---PPPP 783
Score = 32.3 bits (70), Expect = 0.086
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 PPPXPXGXXXPPPPXXPPTTX--PPPPXRXXPXXXSXG 578
PPP P PPPP P PPPP P + G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 470 PPPPXXGXXXPPPPXXXXHNPXXPPPP 550
PP P G PPPP PPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.9 bits (64), Expect = 0.46
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 472 PPPXXXGXXPPPPPXXXPQPXXPPPXXXVPXXXPXAPSR 588
PP G PPPPP PPP P SR
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 473 PPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRP 586
P P PPP P PPPP P P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.1 bits (62), Expect = 0.80
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 470 PPPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRP 586
P P PPP P PPPP + P P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 471 PPPXPXGXXXPPPPXXPPTTXPPPPXRXXPXXXSXGPVPXXXXXXGXGGXP 623
PPP P P P P PP P P P P G G P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP-----PPPPPPGVAGAGPPP 777
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 470 PPPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSP 601
P P G PPPP PPPP G R +P
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 473 PPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXGG 610
P P PP P P PPP P P P GG
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 33.1 bits (72), Expect = 0.049
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Frame = +3
Query: 438 PPLXXKXGGXXPPP---XPXGXXXPPPP--XXPPTTXPPPPXRXXP 560
PP+ K G PPP G PPPP P PPPP P
Sbjct: 210 PPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 255
Score = 32.3 bits (70), Expect = 0.086
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +3
Query: 438 PPLXXKXGGXXPPPX---PXGXXXPPPPXX--PPTTXPPPPXRXXPXXXSXGP 581
PP+ + G PPP G PPPP P PPPP + GP
Sbjct: 301 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFKHHELEEHEGP 353
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 470 PPPPXX---GXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXG 607
PPPP G PPPP PPPP P P + G
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 256
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 470 PPPPXX---GXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXG 607
PPPP G PPPP PPPP P P + G
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 269
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 470 PPPPXX---GXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXG 607
PPPP G PPPP PPPP P P + G
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 282
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 470 PPPPXX---GXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXG 607
PPPP G PPPP PPPP P P + G
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 295
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 470 PPPPXX---GXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXG 607
PPPP G PPPP PPPP P P + G
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 308
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 470 PPPPXX---GXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXG 607
PPPP G PPPP PPPP P P + G
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 321
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 470 PPPPXX---GXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXG 607
PPPP G PPPP PPPP P P + G
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 334
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +2
Query: 470 PPPPXX---GXXXPPPPXXXXHNPXXPPPP 550
PPPP G PPPP PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.049
Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 10/79 (12%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGX---------PPLXXKXGGXXP-PPXPXGXXXPPPPXXPPTT 530
PP P + + P G G PP G P PP PPPP P+T
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 531 XPPPPXRXXPXXXSXGPVP 587
PP S P P
Sbjct: 373 GRQPPPLSSSRAVSNPPAP 391
Score = 29.9 bits (64), Expect = 0.46
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = +3
Query: 384 PXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXGXXXPPPPXXPPTTXPPPPXRXXPX 563
P P + P PP PP P PP P P P PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP- 476
Query: 564 XXSXGPVP 587
+ P P
Sbjct: 477 PPAPAPAP 484
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 418 PXGGGGXPPFXKRXGXKXPPPXXXGXXPPPPPXXXPQPXXPPPXXXVP 561
P G PP P P PP PP P P P P
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 470 PPPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSP 601
PP P PP P P PP P + P P P +P
Sbjct: 447 PPLPPSAPIAPPLPAGM---PAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +2
Query: 473 PPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSP 601
PP PPPP PPP S P P P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 25.4 bits (53), Expect = 9.8
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 6/61 (9%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXGGXXPPPXPXGXXXPPPPXXPP------TTXPPP 542
PP P + P G PPL PP P P PP T+ PP
Sbjct: 361 PPPPPP---RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPV 417
Query: 543 P 545
P
Sbjct: 418 P 418
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.065
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = +3
Query: 429 GGXPPLXX--KXGGXXPPPXPXGXXXPPPPXXPPTTXPPPPXRXXPXXXSXGPVP 587
GG P L K PP P PPT+ PP P P S P+P
Sbjct: 107 GGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 29.9 bits (64), Expect = 0.46
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 5/73 (6%)
Frame = +3
Query: 381 PPXPXAXFXKKXPXXGGGXPPLXXKXG---GXXPPPXPXGXXXPPPPXXP--PTTXPPPP 545
PP P PP+ K PPP PP P P+ PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 546 XRXXPXXXSXGPV 584
+ P S PV
Sbjct: 199 PKVPPPPLSQAPV 211
Score = 29.1 bits (62), Expect = 0.80
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 474 PPXPXGXXXPPPPXXP-PTTXPPPPXRXXPXXXSXGPVP 587
PP P PP P P+ PP P P P+P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 5/54 (9%)
Frame = +1
Query: 439 PPFXKRXGXKXPPPXXXGXXP-----PPPPXXXPQPXXPPPXXXVPXXXPXAPS 585
PP PPP P PP P P P P P P PS
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPS 192
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 471 PPPXPXGXXXPPPPXXPPTTXPPPP 545
PPP P PPP PP+ PPPP
Sbjct: 9 PPPPP-----PPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +3
Query: 459 GGXXPPPXPXGXXXP--PPPXXPP 524
G PPP P G P PPP PP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 499 PPPPPXXXP--QPXXPPPXXXVPXXXPXAPSR 588
PPPPP P QP PPP V P++
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQ 43
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 476 PPXXGXXXPPPPXXXXHNPXXPPPP 550
PP G PPPP P PPPP
Sbjct: 5 PP--GNPPPPPPPPGFEPPSQPPPP 27
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 460 GXKXPPPXXXGXXPPPPPXXXPQP 531
G PPP G PP P P P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 490 GXXPPPPPXXXPQPXXPPPXXXVP 561
G PPPPP +P PP P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.35
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 586 GTGPXXXXXGXXRXGGGGXVVGGXXGGGGXXXPXGXGGG 470
G GP G GGG GG GG G P G GGG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFG-GGPGGFGGG 264
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 580 GPXXXXXGXXRXGGGGXVVGGXXGGGGXXXPXGXGG 473
GP G GGG GG GG G P G GG
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFG-GGPGGHGG 270
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 479 PXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXP 574
P G PPPP P PPP S P
Sbjct: 41 PVRGLTIPPPPSVDHSAPPSGPPPSYSNSAAP 72
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/48 (27%), Positives = 15/48 (31%)
Frame = +2
Query: 470 PPPPXXGXXXPPPPXXXXHNPXXPPPPXXSXXXXPGPRPXVXSPXGGW 613
PPP P P + P P S G P P GG+
Sbjct: 62 PPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPPQGGY 109
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.8 bits (49), Expect(2) = 3.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 501 PPPPXXPPTTXPP 539
P PP PP T PP
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 21.4 bits (43), Expect(2) = 3.1
Identities = 9/29 (31%), Positives = 9/29 (31%)
Frame = +3
Query: 438 PPLXXKXGGXXPPPXPXGXXXPPPPXXPP 524
PP P PPPP PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 472 PPPXXXGXXPPPPPXXXPQPXXPPPXXXVPXXXP 573
P P G PPPPP P VP P
Sbjct: 347 PTPQVQGSRPPPPPPMPAPIYNVPNVPTVPTVSP 380
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 471 PPPXPXGXXXPPPPXXPPTTXPPP 542
PPP P PP PT+ PP
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPP 1906
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 473 PPPXXGXXXPPPPXXXXHNPXXPPPP 550
P P PPPP +P PP P
Sbjct: 736 PTPAVKHHPPPPPVRSSISPSMPPAP 761
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,609,953
Number of Sequences: 5004
Number of extensions: 25239
Number of successful extensions: 403
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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