Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_L15
(946 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 35 0.003
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.018
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.018
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.018
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 33 0.22
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 28 0.24
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 28 0.24
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 0.30
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 0.51
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 0.51
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 32 0.69
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 2.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 24 4.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 24 5.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.4
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 29 6.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.4
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 8.5
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.5
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 8.5
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 28 8.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 8.5
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 28 8.5
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 34.7 bits (76), Expect(2) = 0.003
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +1
Query: 532 PPPXXXXXFFFXXPPPPPXXGGGGXKKKNXFXXXXXXXGGXXXXXXXXXXXXPPPXXGXX 711
PPP PPPPP G N G PPP G
Sbjct: 490 PPPMPSINGHAPNPPPPPPLLGIAPMSTNA--PPPPPMPGMAPLSTGAPTPPPPPPVGMA 547
Query: 712 XXXPPPPPP 738
PPPPPP
Sbjct: 548 NGGPPPPPP 556
Score = 23.8 bits (49), Expect(2) = 0.003
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 721 PPPPPPP 741
PPPPPPP
Sbjct: 577 PPPPPPP 583
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 8/78 (10%)
Frame = +1
Query: 532 PPPXXXXXFFFXXPPPPPXXGG-----GGXKKKNXFXXXXXXXGGXXXXXXXXXXXXPPP 696
PPP PPPPP GG GG GG PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 697 XX---GXXXXXPPPPPPP 741
G PPPPPPP
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 36.3 bits (80), Expect = 0.032
Identities = 24/73 (32%), Positives = 24/73 (32%)
Frame = +3
Query: 531 PPPPXXXXXFFFXXPPPPXXGGGGXXKKKFXFXXXXXXGGGXXXXXXXXXXXPPPXXGXX 710
PPPP PPPP GG GG PPP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 711 XXXXPPPPPPXGG 749
PPPPPP GG
Sbjct: 770 P---PPPPPPPGG 779
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 648 GGXXXXXXXXXXXPPPXXGXXXXXXPPPPPPXGG 749
GG PPP PPPPPP GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG 734
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 8/78 (10%)
Frame = +1
Query: 532 PPPXXXXXFFFXXPPPPPXXGG-----GGXKKKNXFXXXXXXXGGXXXXXXXXXXXXPPP 696
PPP PPPPP GG GG GG PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 697 XX---GXXXXXPPPPPPP 741
G PPPPPPP
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 36.3 bits (80), Expect = 0.032
Identities = 24/73 (32%), Positives = 24/73 (32%)
Frame = +3
Query: 531 PPPPXXXXXFFFXXPPPPXXGGGGXXKKKFXFXXXXXXGGGXXXXXXXXXXXPPPXXGXX 710
PPPP PPPP GG GG PPP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 711 XXXXPPPPPPXGG 749
PPPPPP GG
Sbjct: 770 P---PPPPPPPGG 779
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 648 GGXXXXXXXXXXXPPPXXGXXXXXXPPPPPPXGG 749
GG PPP PPPPPP GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG 734
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 8/78 (10%)
Frame = +1
Query: 532 PPPXXXXXFFFXXPPPPPXXGG-----GGXKKKNXFXXXXXXXGGXXXXXXXXXXXXPPP 696
PPP PPPPP GG GG GG PPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 697 XX---GXXXXXPPPPPPP 741
G PPPPPPP
Sbjct: 356 PPPPPGGFKGGPPPPPPP 373
Score = 36.3 bits (80), Expect = 0.032
Identities = 24/73 (32%), Positives = 24/73 (32%)
Frame = +3
Query: 531 PPPPXXXXXFFFXXPPPPXXGGGGXXKKKFXFXXXXXXGGGXXXXXXXXXXXPPPXXGXX 710
PPPP PPPP GG GG PPP G
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Query: 711 XXXXPPPPPPXGG 749
PPPPPP GG
Sbjct: 353 P---PPPPPPPGG 362
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 648 GGXXXXXXXXXXXPPPXXGXXXXXXPPPPPPXGG 749
GG PPP PPPPPP GG
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG 317
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPPXXXXXKKKKKK 774
PPP G PPPPPPP +KK+
Sbjct: 43 PPPMCGCAPPPPPPPPPPMCGCGCGRKKR 71
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 645 GGGXXXXXXXXXXXPPPXXGXXXXXXPPPPPPXGG 749
GGG PPP G PPPPPP G
Sbjct: 29 GGGCAPAAPACAPPPPPMCGCAPPPPPPPPPPMCG 63
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 618 FXFXXXXXXGGGXXXXXXXXXXXPPPXXGXXXXXXPPPPPP 740
F F GGG PPP PPPPPP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPPXXXXXKKKKKKK 777
PPP PPPPPPP +KK+
Sbjct: 42 PPPPMCGCAPPPPPPPPPPMCGCGCGRKKR 71
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +2
Query: 644 GGGXXXXXXXXXXXXPPPXGXVXXXXPPPPPP--XGXXXXKKKK 769
GGG PPP PPPPPP G +KK+
Sbjct: 28 GGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPPMCGCGCGRKKR 71
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 27.9 bits (59), Expect(2) = 0.24
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PP G PPPPPPP
Sbjct: 434 PPLQVGLVGRVPPPPPPP 451
Score = 24.2 bits (50), Expect(2) = 0.24
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 721 PPPPPPPXXXXXKKKKKKK 777
PPPPPPP + + + +
Sbjct: 446 PPPPPPPPRRRSRSRDRPR 464
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 27.9 bits (59), Expect(2) = 0.24
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PP G PPPPPPP
Sbjct: 382 PPLQVGLVGRVPPPPPPP 399
Score = 24.2 bits (50), Expect(2) = 0.24
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 721 PPPPPPPXXXXXKKKKKKK 777
PPPPPPP + + + +
Sbjct: 394 PPPPPPPPRRRSRSRDRPR 412
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect(2) = 0.30
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 687 PPPXXGXXXXXXPPPPPPXGG 749
PPP PPPPPP GG
Sbjct: 578 PPPPPPPMLGGPPPPPPPPGG 598
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 565 PPPLPQNLSGAPPPPPPP 582
Score = 26.6 bits (56), Expect(2) = 2.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 687 PPPXXGXXXXXXPPPPPPXGG 749
PPP PPPPPP G
Sbjct: 577 PPPPPPPPMLGGPPPPPPPPG 597
Score = 21.8 bits (44), Expect(2) = 2.4
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3
Query: 531 PPPPXXXXXFFFXXPPPP 584
PPPP PPPP
Sbjct: 562 PPPPPPLPQNLSGAPPPP 579
Score = 21.8 bits (44), Expect(2) = 0.30
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3
Query: 531 PPPPXXXXXFFFXXPPPP 584
PPPP PPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPP 580
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 797 PPPLPPISSGAPPPPPPP 814
Score = 25.4 bits (53), Expect(2) = 0.51
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 687 PPPXXGXXXXXXPPPPPP 740
PPP PPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPP 813
Score = 25.4 bits (53), Expect(2) = 0.51
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 723 PPPPPPXGG 749
PPPPPP GG
Sbjct: 810 PPPPPPPGG 818
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 797 PPPLPPISSGAPPPPPPP 814
Score = 25.4 bits (53), Expect(2) = 0.51
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 687 PPPXXGXXXXXXPPPPPP 740
PPP PPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPP 813
Score = 25.4 bits (53), Expect(2) = 0.51
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 723 PPPPPPXGG 749
PPPPPP GG
Sbjct: 810 PPPPPPPGG 818
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 31.9 bits (69), Expect = 0.69
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP G PPPPPPP
Sbjct: 43 PPPPCGGGYEAPPPPPPP 60
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 687 PPPXXGXXXXXXPPPPPP 740
PPP G PPPPPP
Sbjct: 43 PPPPCGGGYEAPPPPPPP 60
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 1345 PPPPSDDLTPVPPPPPPP 1362
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 1346 PPPSDDLTPVPPPPPPPP 1363
Score = 26.6 bits (56), Expect(2) = 2.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPP 738
PPP PPPPPP
Sbjct: 1379 PPPLFSPSMILPPPPPP 1395
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPPXXXXXKK 762
PPP PPPPPP KK
Sbjct: 1378 PPPPLFSPSMILPPPPPPLPSEEKK 1402
Score = 21.8 bits (44), Expect(2) = 2.3
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 532 PPPXXXXXFFFXXPPPPP 585
PPP PPPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPP 1360
Score = 21.4 bits (43), Expect(2) = 3.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 532 PPPXXXXXFFFXXPPPPP 585
PPP PPPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPP 1361
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -3
Query: 758 FXXXXXGGGGGGGXXXXXPXXGGGXXXXXXXXXXXXPPXXXXXXKXKFFFXXPPPPXXGG 579
F GGGGGGG GGG PP PPPP GG
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPP--------------PPPPACGG 63
Query: 578 GGG 570
G G
Sbjct: 64 GCG 66
Score = 24.6 bits (51), Expect(2) = 9.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 740 GGGGGGGXXXXXPXXGGG 687
GGGGGGG GGG
Sbjct: 142 GGGGGGGCGGGGGGCGGG 159
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -3
Query: 584 GGGGGXKKKXXXXXXGGGXXXKKKK 510
GGGGG GGG KK++
Sbjct: 172 GGGGGGCGGGGGGGCGGGCGRKKRE 196
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPP 304
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPP 314
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 73 PPPLISILQQAPPPPPPP 90
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 531 PPPPXXXXXFFFXXPPPPXXGGGGXXKKKFXFXXXXXXGGGXXXXXXXXXXXPPPXXGXX 710
PPPP PPP G + G PPP G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS--PPPPPAGGSPPPPRAGSP 297
Query: 711 XXXXPPPPPPXG 746
PPPPPP G
Sbjct: 298 ----PPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 531 PPPPXXXXXFFFXXPPPPXXGGGGXXKKKFXFXXXXXXGGGXXXXXXXXXXXPPPXXGXX 710
PPPP PPP G + G PPP G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS--PPPPPAGGSPPPPRAGSP 318
Query: 711 XXXXPPPPPPXG 746
PPPPPP G
Sbjct: 319 ----PPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 531 PPPPXXXXXFFFXXPPPPXXGGGGXXKKKFXFXXXXXXGGGXXXXXXXXXXXPPPXXGXX 710
PPPP PPP G + G PPP G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS--PPPPPAGGSPPPPRAGSP 303
Query: 711 XXXXPPPPPPXG 746
PPPPPP G
Sbjct: 304 ----PPPPPPRG 311
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 24.2 bits (50), Expect(2) = 4.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 466 PPXXKGGXXXXXFXFFFFFXXXPPPXXXXXFFFXXPPPPPXXGGGG 603
PP G F PPP F PPPP G G
Sbjct: 720 PPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAG 765
Score = 23.4 bits (48), Expect(2) = 4.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPP 732
PPP G PPPP
Sbjct: 771 PPPPRGGMHHMPPPP 785
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 691 PPXXGXXXXXPPPPPPP 741
PP G PPPPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 689 PPPXGXVXXXXPPPPPP 739
PPP G PPPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 691 PPXXGXXXXXPPPPPPP 741
PP G PPPPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 689 PPPXGXVXXXXPPPPPP 739
PPP G PPPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 23.8 bits (49), Expect(2) = 5.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 721 PPPPPPP 741
PPPPPPP
Sbjct: 517 PPPPPPP 523
Score = 23.4 bits (48), Expect(2) = 5.5
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPP 738
P P PPPPPP
Sbjct: 485 PSPQPAEVSKSPPPPPP 501
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
P P G PPPPPPP
Sbjct: 111 PAPQHGDHEASPPPPPPP 128
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 236 PPPLPPVGAGAPPPPPPP 253
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = -3
Query: 740 GGGGGGGXXXXXPXXGGGXXXXXXXXXXXXPPXXXXXXKXKFFFXXPPPPXXGGG---GG 570
GGGGGGG GG K PPPP GGG GG
Sbjct: 21 GGGGGGGCGGGCGGGCGGGGGGGCLPTLGCSVISFNVPTLKL--PPPPPPPCGGGCGCGG 78
Query: 569 XKKK 558
KK+
Sbjct: 79 RKKR 82
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 688 PPPXXGXXXXXPPPPPPP 741
PPP PPPPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPP 239
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +3
Query: 591 GGGGXXKKKFXFXXXXXXGGGXXXXXXXXXXXPPPXXGXXXXXXPPPPPPXGG 749
GGGG + G P P G PPPPP GG
Sbjct: 24 GGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFGG 76
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +3
Query: 591 GGGGXXKKKFXFXXXXXXGGGXXXXXXXXXXXPPPXXGXXXXXXPPPPPPXGG 749
GGGG + G P P G PPPPP GG
Sbjct: 24 GGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFGG 76
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +3
Query: 591 GGGGXXKKKFXFXXXXXXGGGXXXXXXXXXXXPPPXXGXXXXXXPPPPPPXGG 749
GGGG + G P P G PPPPP GG
Sbjct: 24 GGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFGG 76
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 689 PPPXGXVXXXXPPPPP 736
PPP G V PPPPP
Sbjct: 51 PPPFGPVGYALPPPPP 66
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 571 PPPPPXXGGGGXKK 612
PPPPP GGGG ++
Sbjct: 212 PPPPPPYGGGGRRR 225
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 571 PPPPPXXGGGGXKKKN 618
PPPPP G GG KK++
Sbjct: 35 PPPPPACGCGGRKKRS 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,352,482
Number of Sequences: 27780
Number of extensions: 310651
Number of successful extensions: 5241
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2558
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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