Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_L14
(1132 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 33 0.37
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 32 0.65
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 32 0.65
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 31 1.5
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 2.0
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 2.0
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 2.0
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 2.0
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.6
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 2.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.6
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 30 2.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 3.5
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 30 3.5
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 30 3.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 3.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 3.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 4.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 4.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 26 5.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 26 5.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 6.1
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 29 8.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 8.0
AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodieste... 29 8.0
AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodieste... 29 8.0
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 33.1 bits (72), Expect = 0.37
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +2
Query: 284 FXXXGGGGGGXXKXPPPPPKX*XKXXXFFXXGGXXXPPPXXXXXPXPXPXXXXGG 448
F GGGGGG PPPP GG PPP P P GG
Sbjct: 19 FPSAGGGGGGCGCGAPPPPPACAPPPAPACGGG--APPPPAYAAPAPSYGAPAGG 71
Score = 33.1 bits (72), Expect = 0.37
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPPXXXKKPPRXFXGGG 253
GGGGG PPPP PP GGG
Sbjct: 23 GGGGGGCGCGAPPPPPACAPPPAPACGGG 51
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 32.3 bits (70), Expect = 0.65
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 275 GGFFXXXGGGGGGXXKXPPPPP 340
GG GGGGGG PPPPP
Sbjct: 24 GGGGGYSGGGGGGGDAAPPPPP 45
Score = 32.3 bits (70), Expect = 0.65
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 275 GGFFXXXGGGGGGXXKXPPPPP 340
GG GGGGGG PPPPP
Sbjct: 25 GGGGYSGGGGGGGDAAPPPPPP 46
Score = 31.1 bits (67), Expect = 1.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPPXXXKKPP 274
GGGGG PPPPPP P
Sbjct: 32 GGGGGGDAAPPPPPPADAAPAP 53
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 32.3 bits (70), Expect = 0.65
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 284 FXXXGGGGGGXXKXPPPPP 340
F GGGGGG PPPPP
Sbjct: 18 FNLLGGGGGGCCAPPPPPP 36
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPP 295
GGGGG PPPPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 254 PPPXKXRGGFFXXXGGGGGGXXKXPPPPP 340
PPP GG GG GGG PPP P
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 429 GXGXGXXFXXGGGXXXPPXKKKXXXFXQXFGGGGGXFXXPPPPP 298
G G G GGG PP G GGG PPP P
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 254 PPPXKXRGGFFXXXGGGGGGXXKXPPPPP 340
PPP GG GG GGG PPP P
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 429 GXGXGXXFXXGGGXXXPPXKKKXXXFXQXFGGGGGXFXXPPPPP 298
G G G GGG PP G GGG PPP P
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +2
Query: 254 PPPXKXRGGFFXXXGGGGGGXXKXPPPPPKX*XKXXXFFXXGGXXXPPPXXXXXPXPXPX 433
PPP GG GG PPPPP GG PPP P P P
Sbjct: 726 PPPPPPPGGLPPITGG-------PPPPPPPGGLPPIS----GGPPPPPPPPGGCPPPPPP 774
Query: 434 XXXGG 448
GG
Sbjct: 775 PPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +2
Query: 254 PPPXKXRGGFFXXXGGGGGGXXKXPPPPPKX*XKXXXFFXXGGXXXPPPXXXXXPXPXPX 433
PPP GG GG PPPPP GG PPP P P P
Sbjct: 726 PPPPPPPGGLPPITGG-------PPPPPPPGGLPPIS----GGPPPPPPPPGGCPPPPPP 774
Query: 434 XXXGG 448
GG
Sbjct: 775 PPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = +2
Query: 254 PPPXKXRGGFFXXXGGGGGGXXKXPPPPPKX*XKXXXFFXXGGXXXPPPXXXXXPXPXPX 433
PPP GG GG PPPPP GG PPP P P P
Sbjct: 309 PPPPPPPGGLPPITGG-------PPPPPPPGGLPPIS----GGPPPPPPPPGGCPPPPPP 357
Query: 434 XXXGG 448
GG
Sbjct: 358 PPPGG 362
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 296 GGGGGGXXKXPPPPP 340
GGGGGG PPPPP
Sbjct: 36 GGGGGGCCAPPPPPP 50
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPP 295
GGGGG PPPPPP
Sbjct: 36 GGGGGGCCAPPPPPP 50
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 296 GGGGGGXXKXPPPPP 340
GGGGGG PPPPP
Sbjct: 35 GGGGGGGCCAPPPPP 49
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPP 295
GGGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 284 FXXXGGGGGGXXKXPPPPP 340
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 281 FFXXXGGGGGGXXKXPPPPP 340
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPP 36
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPP 295
GGGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 284 FXXXGGGGGGXXKXPPPPP 340
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 281 FFXXXGGGGGGXXKXPPPPP 340
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPP 36
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Frame = +2
Query: 254 PPPXKXRGGFFXXXGGGGGGXXKXP----PPPPKX*XKXXXFFXXGGXXXPPPXXXXXPX 421
PPP GG+ GGGGGG P PPPP + P P P
Sbjct: 70 PPPFD--GGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPE 127
Query: 422 PXP 430
P P
Sbjct: 128 PQP 130
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPP 295
GGGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 284 FXXXGGGGGGXXKXPPPPP 340
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 281 FFXXXGGGGGGXXKXPPPPP 340
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPP 36
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPP 295
GGGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 284 FXXXGGGGGGXXKXPPPPP 340
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPP 35
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 281 FFXXXGGGGGGXXKXPPPPP 340
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPP 36
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPP 295
GGGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 284 FXXXGGGGGGXXKXPPPPPKX*XKXXXFFXXGGXXXPPP 400
F GGGGG PPPPP GG PPP
Sbjct: 17 FLFPSGGGGGCGCAPPPPP---PACGCGGGGGGYAAPPP 52
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 275 GGFFXXXGGGGGGXXKXPPPPPK 343
GG GGGGGG PP PPK
Sbjct: 625 GGPPRGPGGGGGGGPTGPPAPPK 647
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = -3
Query: 932 GDGGXPGGXXGVXXXXMGRXRXGXGAXSGTXXRXREXEXXXGXRXXXEXGGXGGGXXGXG 753
G GG GG G G G G G R R G GG GGG G
Sbjct: 214 GSGGGGGGGGGGGYGSGG----GWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGG 269
Query: 752 XGGARXPPR 726
GG R R
Sbjct: 270 GGGGRRRSR 278
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 275 GGFFXXXGGGGGGXXKXPPPPPK 343
GG GGGGGG PP PPK
Sbjct: 625 GGPPRGPGGGGGGGPTGPPAPPK 647
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 30.3 bits (65), Expect = 2.6
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +2
Query: 284 FXXXGGGGGGXXKXPPPPPKX*XKXXXFFXXGGXXXPPPXXXXXPXPXPXXXXGG 448
F GGGGG PPPPP GG PPP P P GG
Sbjct: 17 FLFPSGGGGGCGCAPPPPPAC--------GCGGGAAPPP-AYVAPAPAYAAPAGG 62
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -3
Query: 926 GGXPGGXXGVXXXXMGRXRXGXGAXSGTXXRXREXEXXXGXRXXXEXGGXGGGXXGXGXG 747
GG GG G G G G G G GG GGG G G G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 746 G 744
G
Sbjct: 83 G 83
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 275 GGFFXXXGGGGGGXXKXPPPPP 340
GG GGG GG PPPPP
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPP 59
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 275 GGFFXXXGGGGGGXXKXPPPPP 340
GG GGG GG PPPPP
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPP 116
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 348 QXFGGGGGXFXXPPPPPPXXXKKPP 274
Q GGGG PPPPPP P
Sbjct: 105 QTSGGGGAYAQAPPPPPPSSYASGP 129
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/77 (25%), Positives = 24/77 (31%)
Frame = -3
Query: 974 GXSAAERGTXXXTXGDGGXPGGXXGVXXXXMGRXRXGXGAXSGTXXRXREXEXXXGXRXX 795
G RG GG GG GR G ++ + G +
Sbjct: 771 GGGGGYRGNSYDDRRGGGGGGGGYN-DRQDFGRNYGGRDGGGPQRYHDQQQQRQGGYQGG 829
Query: 794 XEXGGXGGGXXGXGXGG 744
GG GGG G G GG
Sbjct: 830 GYGGGYGGGGGGGGGGG 846
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 3.5
Identities = 24/89 (26%), Positives = 26/89 (29%), Gaps = 7/89 (7%)
Frame = -3
Query: 986 NXEQGXSAAERGTXXXTXGDGGXPGGXXGVXXXXMGRXRXGXGAXSGTXXRXREXEXXXG 807
N G RG GG G G G G G G R + G
Sbjct: 91 NGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPG 150
Query: 806 XRXXXEXGGXGGGXXG-------XGXGGA 741
+ GG GGG G G GGA
Sbjct: 151 SNGGGDWGGNGGGGRGGGGGRGGGGGGGA 179
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.9 bits (64), Expect = 3.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 296 GGGGGGXXKXPPPPP 340
GG GGG + PPPPP
Sbjct: 202 GGSGGGSGRFPPPPP 216
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPPXXXKKPPRXFXG 259
GG G PPPPPP PPR G
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGG 788
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +2
Query: 299 GGGGGXXKXPPPPPKX*XKXXXFFXXGGXXXPPPXXXXXPXPXPXXXXGGGXQNXXXXP 475
GG G PPPPP GG PPP P P P G P
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQ-GGIPPPPPLGIIPPPPPPGNLLMNGINRGDISP 819
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPPXXXKKPPRXFXG 259
GG G PPPPPP PPR G
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGG 788
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +2
Query: 299 GGGGGXXKXPPPPPKX*XKXXXFFXXGGXXXPPPXXXXXPXPXPXXXXGGGXQNXXXXP 475
GG G PPPPP GG PPP P P P G P
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQ-GGIPPPPPLGIIPPPPPPGNLLMNGINRGDISP 819
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 25.8 bits (54), Expect(2) = 5.4
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -2
Query: 456 WXPPPXXXXGXGXGXXFXXGGGXXXPPXKKKXXXFXQXFG--GGGGXFXXPPPPPP 295
W PPP G G G PP + FG G GG PPPPPP
Sbjct: 306 WPPPPPPPPGRTPGPPGMPGMPPPPPPSR---------FGPPGMGGM---PPPPPP 349
Score = 21.8 bits (44), Expect(2) = 5.4
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 309 PPPPPXXXKKPP 274
PPPPP PP
Sbjct: 374 PPPPPSRPPAPP 385
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 25.8 bits (54), Expect(2) = 5.4
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -2
Query: 456 WXPPPXXXXGXGXGXXFXXGGGXXXPPXKKKXXXFXQXFG--GGGGXFXXPPPPPP 295
W PPP G G G PP + FG G GG PPPPPP
Sbjct: 296 WPPPPPPPPGRTPGPPGMPGMPPPPPPSR---------FGPPGMGGM---PPPPPP 339
Score = 21.8 bits (44), Expect(2) = 5.4
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 309 PPPPPXXXKKPP 274
PPPPP PP
Sbjct: 364 PPPPPSRPPAPP 375
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -2
Query: 447 PPXXXXGXGXGXXFXXGGGXXXPPXKKKXXXFXQXFGGGGGXFXXPPPPPPXXXKKPPRX 268
PP G G G G P + GG GG F PPP P PP
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGG-FGPPPPGGPGAYGPPPTG 450
Query: 267 F 265
F
Sbjct: 451 F 451
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 339 GGGGGXFXXPPPPPPXXXKKPPRXFXG 259
GGG G + PPP K PP F G
Sbjct: 198 GGGPGGYPSAPPPYDDYSKPPPYGFRG 224
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 8.0
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 854 RRPPXSSAXPSXXXXLXPXPQGXPHXRPXXXXSPSPPRXXP 976
R PP S P P PQ P P +PPR P
Sbjct: 148 RTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPP 188
>AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans
Phosphodiesterase protein 6, isoformb protein.
Length = 697
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 275 GGFFXXXGGGGGGXXKXPPPP 337
GG + GGGGGG PP P
Sbjct: 62 GGSYSENGGGGGGSRGAPPTP 82
>AC024877-3|AAF60898.1| 760|Caenorhabditis elegans
Phosphodiesterase protein 6, isoforma protein.
Length = 760
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 275 GGFFXXXGGGGGGXXKXPPPP 337
GG + GGGGGG PP P
Sbjct: 62 GGSYSENGGGGGGSRGAPPTP 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,593,694
Number of Sequences: 27780
Number of extensions: 248557
Number of successful extensions: 2305
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3057296194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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