Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_L12
(1028 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 43 3e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 43 3e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 43 3e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.062
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.062
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.19
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.19
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.19
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.44
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.58
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.76
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 3.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 3.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.1
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 29 4.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 5.4
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 5.4
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 5.4
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 7.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/55 (41%), Positives = 23/55 (41%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
GP PPPP G G P GG PPPPP K GG PPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK-------GGPPPPP 788
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPP 566
GP PPPP GG P KGG PPPPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 35.1 bits (77), Expect = 0.082
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 9/64 (14%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGG---------XPPPPPXXXXXFXKKKXXXGXGGX 512
G PPPP GG G P GG PPPPP G G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 511 PPPP 500
PPPP
Sbjct: 784 PPPP 787
Score = 32.3 bits (70), Expect = 0.58
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -2
Query: 664 GPXPPP--PXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
GP PPP P GG P G PPPPP GG PPPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG------LPPISGGPPPPP 762
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = +3
Query: 423 PPPPXXXXXXXNXXXXXXPXXXXKXXGGGGXPPXPXXXFFXXKXXXXXGGGGGXPPFXXK 602
PPPP P GG PP P GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS--------GGPPPPPPP 764
Query: 603 XXGXPXXXPPPPXXGGGGXGP 665
G P PPPP G G P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/55 (41%), Positives = 23/55 (41%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
GP PPPP G G P GG PPPPP K GG PPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK-------GGPPPPP 788
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPP 566
GP PPPP GG P KGG PPPPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 35.1 bits (77), Expect = 0.082
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 9/64 (14%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGG---------XPPPPPXXXXXFXKKKXXXGXGGX 512
G PPPP GG G P GG PPPPP G G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 511 PPPP 500
PPPP
Sbjct: 784 PPPP 787
Score = 32.3 bits (70), Expect = 0.58
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -2
Query: 664 GPXPPP--PXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
GP PPP P GG P G PPPPP GG PPPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG------LPPISGGPPPPP 762
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = +3
Query: 423 PPPPXXXXXXXNXXXXXXPXXXXKXXGGGGXPPXPXXXFFXXKXXXXXGGGGGXPPFXXK 602
PPPP P GG PP P GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS--------GGPPPPPPP 764
Query: 603 XXGXPXXXPPPPXXGGGGXGP 665
G P PPPP G G P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/55 (41%), Positives = 23/55 (41%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
GP PPPP G G P GG PPPPP K GG PPPP
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK-------GGPPPPP 371
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPP 566
GP PPPP GG P KGG PPPPP
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 35.1 bits (77), Expect = 0.082
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 9/64 (14%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGG---------XPPPPPXXXXXFXKKKXXXGXGGX 512
G PPPP GG G P GG PPPPP G G
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 511 PPPP 500
PPPP
Sbjct: 367 PPPP 370
Score = 32.3 bits (70), Expect = 0.58
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -2
Query: 664 GPXPPP--PXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
GP PPP P GG P G PPPPP GG PPPP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG------LPPISGGPPPPP 345
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = +3
Query: 423 PPPPXXXXXXXNXXXXXXPXXXXKXXGGGGXPPXPXXXFFXXKXXXXXGGGGGXPPFXXK 602
PPPP P GG PP P GG PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS--------GGPPPPPPP 347
Query: 603 XXGXPXXXPPPPXXGGGGXGP 665
G P PPPP G G P
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPP 368
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.062
Identities = 22/58 (37%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = -2
Query: 661 PXPPPPXXGG----GGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
P PPPP G GG P GG PPPPP + G G PPPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP-------PRYPSAGPGMYPPPP 367
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -2
Query: 661 PXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
P P PP G P G PPPPP + G G PPPP
Sbjct: 274 PPPMPPTPG----MTPRPPPPPSSGMWPPPPPPPP---GRTPGPPGMPGMPPPP 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.062
Identities = 22/58 (37%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = -2
Query: 661 PXPPPPXXGG----GGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
P PPPP G GG P GG PPPPP + G G PPPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP-------PRYPSAGPGMYPPPP 377
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -2
Query: 661 PXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
P P PP G P G PPPPP + G G PPPP
Sbjct: 284 PPPMPPTPG----MTPRPPPPPSSGMWPPPPPPPP---GRTPGPPGMPGMPPPP 330
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.19
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPP 503
G PPPP G + G PPPPP GG PPP
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 657 PPPPPXXGGGGXXXAXXXXXXKRGXPPPPPXXXXXXFXKKKXXXXXGGXPPPP 499
PPPPP G G PPPPP G PPPP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG------SPPPPRAGSPPPPP 301
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 661 PXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXK--KKXXXGXGGXPPPP 500
P PPPP G G PPPP GG PPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.19
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPP 503
G PPPP G + G PPPPP GG PPP
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 657 PPPPPXXGGGGXXXAXXXXXXKRGXPPPPPXXXXXXFXKKKXXXXXGGXPPPP 499
PPPPP G G PPPPP G PPPP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG------SPPPPRAGSPPPPP 322
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 661 PXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXK--KKXXXGXGGXPPPP 500
P PPPP G G PPPP GG PPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.19
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPP 503
G PPPP G + G PPPPP GG PPP
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 657 PPPPPXXGGGGXXXAXXXXXXKRGXPPPPPXXXXXXFXKKKXXXXXGGXPPPP 499
PPPPP G G PPPPP G PPPP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG------SPPPPRAGSPPPPP 307
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 661 PXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXK--KKXXXGXGGXPPPP 500
P PPPP G G PPPP GG PPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.44
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
G PPPP GG P GG PPPPP G G P PP
Sbjct: 82 GIPPPPPMFAGG-----IPPPPPMMGGIPPPPPMFGAP-PPPPPPSGLGVAPQPP 130
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 589 GGXPPPPPXXXXXFXKKKXXXGXGGXPPPPXFF 491
GG PPPPP GG PPPP F
Sbjct: 81 GGIPPPPPMFAGGIPPPPPM--MGGIPPPPPMF 111
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.58
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -2
Query: 664 GPXPPPPXXGGGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPP 503
G PPPP G G P GG PPPP + G PPP
Sbjct: 408 GYGPPPPGGPGAPGSYGPPQGGP--GGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -1
Query: 653 PPPPXXGGGGXXGXXXXFXXKGGXPPPPPXXXXXFXXKKXXXGXGGGAPPP 501
PPPP G G PPP F + G GG PPP
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPP----SAFGAPQGPGGPGGYGPPP 413
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 570 GGGGXPPFXXKXXGXPXXXPPPPXXGGGGXGP 665
GG G P G P PPP G G GP
Sbjct: 415 GGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP 446
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.76
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Frame = -2
Query: 655 PPPPXXG------GGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPPP 500
PPPP G G G P K G PPPPP + PPPP
Sbjct: 43 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPP 100
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 6/57 (10%)
Frame = -2
Query: 655 PPPPXXG------GGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPP 503
PPPP G G G P K G PPPPP + PPP
Sbjct: 137 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPP 193
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 6/57 (10%)
Frame = -2
Query: 655 PPPPXXG------GGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXGXGGXPPP 503
PPPP G G G P K G PPPPP + PPP
Sbjct: 106 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 162
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 1.8
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 10/62 (16%)
Frame = -2
Query: 655 PPPPXXG------GGGXXXGXPXXXXKKGGXPPPPPXXXXXFXKKKXXXG----XGGXPP 506
PPPP G G P GG PPPPP K G GG PP
Sbjct: 521 PPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLL--KGAVAGLKSVPGGPPP 578
Query: 505 PP 500
PP
Sbjct: 579 PP 580
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = -2
Query: 637 GGGGXXXGXPXXXXKKGG-XPPPPPXXXXXFXKKKXXXGXGGXPPPPXFFXXXXGXXXXX 461
GGGG G GG PPP P G GG PPP G
Sbjct: 30 GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Query: 460 XXXXXXXXXGGGG 422
GGGG
Sbjct: 90 CGGGGGGCGGGGG 102
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 650 PPPXXGGGGXXGXXXXFXXKGGXPPPPPXXXXXFXXKKXXXGXGGG 513
PPP GGG G GG PPP G GGG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGG 95
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = -2
Query: 637 GGGGXXXGXPXXXXKKGG-XPPPPPXXXXXFXKKKXXXGXGGXPPPPXFFXXXXGXXXXX 461
GGGG G GG PPP P G GG PPP G
Sbjct: 30 GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Query: 460 XXXXXXXXXGGGG 422
GGGG
Sbjct: 90 CGGGGGGCGGGGG 102
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 650 PPPXXGGGGXXGXXXXFXXKGGXPPPPPXXXXXFXXKKXXXGXGGG 513
PPP GGG G GG PPP G GGG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGG 95
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -2
Query: 661 PXPPPPXXGG-GGXXXGXPXXXXKKGGXPPPPP 566
P PPPP G P GG PPPPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 9/63 (14%)
Frame = -2
Query: 661 PXPPPPXXGGGGXXXGXPXXXXKKGGXP---------PPPPXXXXXFXKKKXXXGXGGXP 509
P PPPP G G P G P PPPP F P
Sbjct: 574 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 633
Query: 508 PPP 500
PPP
Sbjct: 634 PPP 636
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 9/63 (14%)
Frame = -2
Query: 661 PXPPPPXXGGGGXXXGXPXXXXKKGGXP---------PPPPXXXXXFXKKKXXXGXGGXP 509
P PPPP G G P G P PPPP F P
Sbjct: 400 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 459
Query: 508 PPP 500
PPP
Sbjct: 460 PPP 462
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 4.1
Identities = 22/94 (23%), Positives = 22/94 (23%)
Frame = -1
Query: 896 GAGGGXAXRXDXXXXXXXXGXXXXXXXPXXXXXXXXXXXAXXXGXXGGEGGXXXXXXAXX 717
G GGG G P G GG GG
Sbjct: 31 GCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 90
Query: 716 GXEXXGXXXXXXXXXXXXXXPPPPPXXGGGGXXG 615
G G PPPPP GGG G
Sbjct: 91 GCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGG 124
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 500 GGGGXPPXXXXXFFFXKXXXXXXGGGGGXPLFXXXXXXAXXXPPPP 637
GG G P FF GGGG F PPPP
Sbjct: 193 GGKGGPGGFSPLSFFLNGGLGGTGGGGNNGFFVPVPVVIPPPPPPP 238
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -1
Query: 647 PPXXGGGGXXGXXXXFXXKGGXPPPPPXXXXXFXXKKXXXGXGGGAPPPXXF 492
P GGGG G G PPPPP GGGAPPP +
Sbjct: 20 PSAGGGGGGCGC--------GAPPPPPACAPP-----PAPACGGGAPPPPAY 58
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 502 GGGAPPPXPXXFFFXKXXXXXXGGGGGXPPFXXXXXXXPXXPPPPXXGGGG 654
GGGAPP + GGGGG P PP P GG G
Sbjct: 36 GGGAPPCSSSSY--------ATGGGGGSYAAAPALPPPPPPPPAPIGGGAG 78
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 502 GGGAPPPXPXXFFFXKXXXXXXGGGGGXPPFXXXXXXXPXXPPPPXXGGGG 654
GGGAPP + GGGGG P PP P GG G
Sbjct: 36 GGGAPPCSSSSY--------ATGGGGGSYAAAPALPPPPPPPPAPIGGGAG 78
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 753 GGGGXGXXXGXXXXGGXRRXXXXXXXXXXXXXPPPPPXXGGGG 625
GGGG G G GG PPPPP GGGG
Sbjct: 191 GGGGMGGGGGSGGSGGGS-----------GRFPPPPPPYGGGG 222
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 567 GGGGGXPPFXXKXXGXPXXXPPPPXXGGGG 656
GGGGG G PPPP GGGG
Sbjct: 196 GGGGGS---GGSGGGSGRFPPPPPPYGGGG 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,921,734
Number of Sequences: 27780
Number of extensions: 441562
Number of successful extensions: 2008
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2720181880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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