Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_L11
         (1108 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.9  
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    29   5.0  
09_03_0145 - 12749288-12751510                                         29   5.0  
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859...    29   8.7  
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119     29   8.7  
05_01_0141 - 937428-937717,938483-938705                               29   8.7  
04_04_1166 - 31427523-31428154,31428888-31429020                       29   8.7  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = +1

Query: 445 PP--GXXXPPPPXGXKPPPXKXXGG 513
           PP  G   PPPP G  PPP    GG
Sbjct: 348 PPAKGPPPPPPPKGPSPPPPPPPGG 372


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPPPXKXXGGG 516
           PPG    PP    +PPP    GGG
Sbjct: 724 PPGITPSPPEYAPEPPPGPPGGGG 747


>09_03_0145 - 12749288-12751510
          Length = 740

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 442 TPPGXXXPPPPXGXKPPPXKXXG 510
           T P    PPPP G +PPP    G
Sbjct: 26  TNPSPPPPPPPPGIQPPPPALPG 48


>11_06_0561 -
           24984960-24985205,24985283-24985354,24985906-24985977,
           24986612-24986782,24987464-24987653,24987733-24987976,
           24988162-24988474,24988687-24989517,24989628-24989672,
           24989677-24989790,24989877-24990371,24990627-24990824,
           24990902-24991357
          Length = 1148

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
 Frame = -3

Query: 515 PPPXXFXG---GGXXPXGGGGXXXPGGV*KXPQE 423
           PPP    G   GG  P  GGG   PGG    P++
Sbjct: 63  PPPTAAGGQGGGGGGPVSGGGGSAPGGAATAPRQ 96


>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
          Length = 440

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 749 KKKKKKXXXGGGXXKKKKKXXXFXFFFFF 835
           KKKKKK        KKKKK   F   FF+
Sbjct: 380 KKKKKKKKKKKKKKKKKKKKLRFVMIFFY 408


>05_01_0141 - 937428-937717,938483-938705
          Length = 170

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPPPXKXXGGG 516
           P     PPPP    PPP    GGG
Sbjct: 34  PQQGYYPPPPTAYPPPPPAGYGGG 57


>04_04_1166 - 31427523-31428154,31428888-31429020
          Length = 254

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -3

Query: 512 PPXXFXGGGXXPXGGGGXXXPGG 444
           PP    GGG    GGGG   PGG
Sbjct: 229 PPAASGGGGGFIGGGGGGGFPGG 251


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,254,165
Number of Sequences: 37544
Number of extensions: 248534
Number of successful extensions: 2297
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3328000860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)