Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_L11
         (1108 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical pr...    32   0.84 
Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical pr...    32   0.84 
L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.      32   0.84 
AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.    32   0.84 
U97002-11|AAY86259.1|  121|Caenorhabditis elegans Hypothetical p...    30   3.4  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    29   4.5  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    29   4.5  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    29   4.5  
AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical...    29   4.5  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    29   7.8  

>Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical
           protein C02C6.1b protein.
          Length = 838

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPPPXKXXGGG 516
           P G    PPP G +PPP    GGG
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGG 806


>Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical
           protein C02C6.1a protein.
          Length = 830

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPPPXKXXGGG 516
           P G    PPP G +PPP    GGG
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGG 806


>L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.
          Length = 830

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPPPXKXXGGG 516
           P G    PPP G +PPP    GGG
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGG 806


>AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.
          Length = 838

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPPPXKXXGGG 516
           P G    PPP G +PPP    GGG
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGG 806


>U97002-11|AAY86259.1|  121|Caenorhabditis elegans Hypothetical
           protein K09H11.11 protein.
          Length = 121

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPP 492
           PPG   PPPP G +PP
Sbjct: 8   PPGQQPPPPPPGQQPP 23


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPPPXK 501
           PP    PPPP G  PPP +
Sbjct: 275 PPTGSPPPPPAGGSPPPPR 293


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPPPXK 501
           PP    PPPP G  PPP +
Sbjct: 296 PPTGSPPPPPAGGSPPPPR 314


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 445 PPGXXXPPPPXGXKPPPXK 501
           PP    PPPP G  PPP +
Sbjct: 281 PPTGSPPPPPAGGSPPPPR 299


>AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.12 protein.
          Length = 78

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 451 GXXXPPPPXGXKPPPXKXXGGG 516
           G   PPPP    PPP    GGG
Sbjct: 30  GCGAPPPPPACAPPPAPACGGG 51


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 517 PPPPXIFXGGVXPP 476
           PPPP +F GG+ PP
Sbjct: 84  PPPPPMFAGGIPPP 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,467,348
Number of Sequences: 27780
Number of extensions: 154297
Number of successful extensions: 932
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2992200068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)