Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_L08
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 33 0.35
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 30 2.5
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 3.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.3
12_02_1174 - 26696869-26698191 29 5.7
08_01_0134 + 1067826-1068158 29 5.7
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 5.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.6
06_01_0178 + 1386981-1387505 28 7.6
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 28 7.6
01_05_0490 + 22672241-22674679 28 7.6
07_01_0862 - 7172083-7172931 28 10.0
07_01_0080 + 587674-588510 28 10.0
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 517 PXXPXXXXXXPPPXPPLPXXXPXPXXPXXRP 609
P P PPP PPLP P P P P
Sbjct: 428 PPLPPPPPPPPPPPPPLPPNMPPPLPPPPEP 458
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 547 PPPXPPLPXXXPXPXXPXXRP 609
PPP PP P P P P RP
Sbjct: 38 PPPPPPSPVPSPAPPPPPHRP 58
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 547 PPPXPPLPXXXPXPXXPXXRP 609
PPP PP P P P P RP
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRP 373
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 517 PXXPXXXXXXPPPXPPLPXXXPXPXXP 597
P P PPP PP P P P P
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPP 379
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 517 PXXPXXXXXXPPPXPPLPXXXPXPXXPXXRPXXXXXXP 630
P P PPP PPL P P P P P
Sbjct: 1159 PLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQP 1196
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 517 PXXPXXXXXXPPPXPPLPXXXPXPXXPXXRPXXXXXXPXXXXXLSXXXSP 666
P P PPP PP P P P P +P P L P
Sbjct: 143 PVKPQPPPSLPPPPPP-PPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPP 191
>08_01_0134 + 1067826-1068158
Length = 110
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 526 PXXXXXXPPPXPPLPXXXPXPXXP 597
P PPP PPLP P P P
Sbjct: 3 PPLPSSRPPPPPPLPRPHPAPPPP 26
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 517 PXXPXXXXXXPPPXPPLPXXXPXPXXPXXRP 609
P P PPP PP P P P P P
Sbjct: 121 PPPPPHPPEDPPPHPPHPPDHPPPPPPCRVP 151
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/78 (23%), Positives = 19/78 (24%)
Frame = -2
Query: 436 PPPPPXPXXXXXXXXXXXXXXXXXXFYXPXPPXXXXXAPXKXGGVFFXXXXXPPKXAPFK 257
PPPPP P P PP P + PP P
Sbjct: 54 PPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPP 113
Query: 256 KXRGXQNXPPXPPGXXNP 203
PP PP P
Sbjct: 114 PSPPPSAPPPPPPPPTQP 131
>06_01_0178 + 1386981-1387505
Length = 174
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -1
Query: 689 GXRRKRQRGXXXXERXXXXXGXXKXXXGRXXGXXGXGXXXGRGGXGGGXXXXXXGXXG 516
G RK G G K G G G G GRGG GG G G
Sbjct: 78 GKGRKGGAGGHGGAGGGGGGGGGKGRKGGRGGDGGSGGAGGRGGDGGSGGQGGRGGDG 135
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 629 GXXKXXXGRXXGXXGXGXXXGRGGXGGGXXXXXXGXXG 516
G GR G G GRGG GGG G G
Sbjct: 55 GDFSRFGGRGRGGGAGGGGWGRGGGGGGGAGGYRGGGG 92
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 547 PPPXPPLPXXXPXPXXP 597
PPP PPLP P P P
Sbjct: 690 PPPSPPLPPPPPPPPPP 706
>07_01_0862 - 7172083-7172931
Length = 282
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +1
Query: 547 PPPXPPLPXXXPXPXXPXXRPXXXXXXPXXXXXLSXXXSPLCLXRRFP 690
PPP PPLP P P P P + P+ L P
Sbjct: 188 PPPQPPLPEKENTPLPPLLLPPKKKPLPPPSPTAAAKEEPIELEHAAP 235
>07_01_0080 + 587674-588510
Length = 278
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 517 PXXPXXXXXXPPPXPPLPXXXPXPXXP 597
P P PPP PP P P P P
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPPPPP 120
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 517 PXXPXXXXXXPPPXPPLPXXXPXPXXP 597
P P PPP PP P P P P
Sbjct: 95 PPPPPSSGSPPPPPPPPPPPPPPPPPP 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,562,257
Number of Sequences: 37544
Number of extensions: 162202
Number of successful extensions: 3164
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2849
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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