Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_L04
         (991 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro...    29   3.8  
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro...    29   3.8  
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB...    29   3.8  
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA...    29   3.8  

>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
           protein protein.
          Length = 1091

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 848 GGGXXXPPPPPXXXGXXXGG 907
           GGG   PPPPP   G   GG
Sbjct: 519 GGGGAPPPPPPPMPGRAGGG 538



 Score = 25.4 bits (53), Expect(2) = 3.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 692 GXXPPPPPPP 721
           G  PPPPPPP
Sbjct: 552 GGPPPPPPPP 561



 Score = 23.4 bits (48), Expect(2) = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 677 GXXXXGXXPPPPPP 718
           G    G  PPPPPP
Sbjct: 533 GRAGGGPPPPPPPP 546


>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
           protein.
          Length = 1091

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 848 GGGXXXPPPPPXXXGXXXGG 907
           GGG   PPPPP   G   GG
Sbjct: 519 GGGGAPPPPPPPMPGRAGGG 538



 Score = 25.4 bits (53), Expect(2) = 3.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 692 GXXPPPPPPP 721
           G  PPPPPPP
Sbjct: 552 GGPPPPPPPP 561



 Score = 23.4 bits (48), Expect(2) = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 677 GXXXXGXXPPPPPP 718
           G    G  PPPPPP
Sbjct: 533 GRAGGGPPPPPPPP 546


>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
           isoform B protein.
          Length = 1091

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 848 GGGXXXPPPPPXXXGXXXGG 907
           GGG   PPPPP   G   GG
Sbjct: 519 GGGGAPPPPPPPMPGRAGGG 538



 Score = 25.4 bits (53), Expect(2) = 3.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 692 GXXPPPPPPP 721
           G  PPPPPPP
Sbjct: 552 GGPPPPPPPP 561



 Score = 23.4 bits (48), Expect(2) = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 677 GXXXXGXXPPPPPP 718
           G    G  PPPPPP
Sbjct: 533 GRAGGGPPPPPPPP 546


>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
           isoform A protein.
          Length = 1091

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 848 GGGXXXPPPPPXXXGXXXGG 907
           GGG   PPPPP   G   GG
Sbjct: 519 GGGGAPPPPPPPMPGRAGGG 538



 Score = 25.4 bits (53), Expect(2) = 3.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 692 GXXPPPPPPP 721
           G  PPPPPPP
Sbjct: 552 GGPPPPPPPP 561



 Score = 23.4 bits (48), Expect(2) = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 677 GXXXXGXXPPPPPP 718
           G    G  PPPPPP
Sbjct: 533 GRAGGGPPPPPPPP 546


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,983,268
Number of Sequences: 53049
Number of extensions: 736250
Number of successful extensions: 24405
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16191
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4996925532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)