Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_T7_L03
(1052 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 3.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 25 3.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 25 3.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 25 3.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 24 3.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 24 6.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 24 6.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 24 6.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 24 7.7
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 3.2
Identities = 24/78 (30%), Positives = 24/78 (30%)
Frame = +3
Query: 657 GGGGGGXXXXXXGXGXXXKXFFFFFXFFXXPPPPPPXXXXXXXXXXXXXXGXXGGGEXXX 836
GGGGGG G G PPPPPP G GGG
Sbjct: 86 GGGGGGCGGGGGGCGGGGGC-----GGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140
Query: 837 XXXXXXTXPXXXGGGGGG 890
GGGGGG
Sbjct: 141 CGGGGG---GGCGGGGGG 155
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +3
Query: 657 GGGGGGXXXXXXGXGXXXKXFFFFFXFFXXPPPPPPXXXXXXXXXXXXXXGXXGGGEXXX 836
GGGGGG G G PPPPP G GGG
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGG--CG 80
Query: 837 XXXXXXTXPXXXGGGGGG 890
GGGGGG
Sbjct: 81 GGGGCGGGGGGCGGGGGG 98
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 25.4 bits (53), Expect(2) = 3.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 700 PXPXXXXXXPPPPPPXXF 647
P P PPPPPP F
Sbjct: 763 PPPGGCPPPPPPPPPGGF 780
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -2
Query: 886 PPPPPXXXGXVXXXXXXXXFSPPP 815
PPPPP G PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 25.4 bits (53), Expect(2) = 3.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 700 PXPXXXXXXPPPPPPXXF 647
P P PPPPPP F
Sbjct: 763 PPPGGCPPPPPPPPPGGF 780
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -2
Query: 886 PPPPPXXXGXVXXXXXXXXFSPPP 815
PPPPP G PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 25.4 bits (53), Expect(2) = 3.6
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 700 PXPXXXXXXPPPPPPXXF 647
P P PPPPPP F
Sbjct: 346 PPPGGCPPPPPPPPPGGF 363
Score = 22.6 bits (46), Expect(2) = 3.6
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -2
Query: 886 PPPPPXXXGXVXXXXXXXXFSPPP 815
PPPPP G PPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPP 348
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -2
Query: 886 PPPPPXXXGXVXXXXXXXXFSPPP 815
PPPPP G + PPP
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPP 107
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 700 PXPXXXXXXPPPPPP 656
P P PPPPPP
Sbjct: 105 PPPPPMFGAPPPPPP 119
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 700 PXPXXXXXXPPPPPP 656
P P PPPPPP
Sbjct: 238 PLPPVGAGAPPPPPP 252
Score = 23.4 bits (48), Expect(2) = 6.4
Identities = 9/27 (33%), Positives = 10/27 (37%)
Frame = -2
Query: 886 PPPPPXXXGXVXXXXXXXXFSPPPXXP 806
PP PP G + PPP P
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPPLPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 700 PXPXXXXXXPPPPPP 656
P P PPPPPP
Sbjct: 224 PLPPVGAGAPPPPPP 238
Score = 23.4 bits (48), Expect(2) = 6.4
Identities = 9/27 (33%), Positives = 10/27 (37%)
Frame = -2
Query: 886 PPPPPXXXGXVXXXXXXXXFSPPPXXP 806
PP PP G + PPP P
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPP 227
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 23.8 bits (49), Expect(2) = 6.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 700 PXPXXXXXXPPPPPP 656
P P PPPPPP
Sbjct: 224 PLPPVGAGAPPPPPP 238
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 9/27 (33%), Positives = 10/27 (37%)
Frame = -2
Query: 886 PPPPPXXXGXVXXXXXXXXFSPPPXXP 806
PP PP G + PPP P
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPP 227
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 763 GGGGGGXXKXKKKKKNXFXXXPXPXXXXXXPPPPPP 656
GGGGGG + P PPPPPP
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 763 GGGGGGXXKXKKKKKNXFXXXPXPXXXXXXPPPPPP 656
GGGGGG + P PPPPPP
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 23.8 bits (49), Expect(2) = 7.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 700 PXPXXXXXXPPPPPP 656
P P PPPPPP
Sbjct: 582 PPPMLGGPPPPPPPP 596
Score = 23.0 bits (47), Expect(2) = 7.7
Identities = 9/26 (34%), Positives = 10/26 (38%)
Frame = -2
Query: 883 PPPPXXXGXVXXXXXXXXFSPPPXXP 806
PPPP G + PPP P
Sbjct: 542 PPPPPIAGLLAANGTNVPIPPPPPPP 567
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,287,706
Number of Sequences: 27780
Number of extensions: 274945
Number of successful extensions: 5942
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3251
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2803879784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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