Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_K12
         (819 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     32   0.48 
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    32   0.48 
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119     29   4.4  
11_04_0350 - 16658497-16659015                                         28   7.8  

>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 62  FFFFFFFFFFFFFFFFFF 79



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 63  FFFFFFFFFFFFFFFFFF 80



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 64  FFFFFFFFFFFFFFFFFF 81



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 65  FFFFFFFFFFFFFFFFFF 82



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 66  FFFFFFFFFFFFFFFFFF 83



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 67  FFFFFFFFFFFFFFFFFF 84



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 68  FFFFFFFFFFFFFFFFFF 85



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 69  FFFFFFFFFFFFFFFFFF 86



 Score = 31.5 bits (68), Expect = 0.83
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +2

Query: 608 KXYFFFFFFXXXXXFFFFFF 667
           K  FFFFFF     FFFFFF
Sbjct: 59  KEDFFFFFFFFFFFFFFFFF 78



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +3

Query: 600 KXXXXIFFFFFFXXXXXFFFFF 665
           K     FFFFFF     FFFFF
Sbjct: 59  KEDFFFFFFFFFFFFFFFFFFF 80


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 87  FFFFFFFFFFFFFFFFFF 104



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 88  FFFFFFFFFFFFFFFFFF 105



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 89  FFFFFFFFFFFFFFFFFF 106



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 90  FFFFFFFFFFFFFFFFFF 107



 Score = 32.3 bits (70), Expect = 0.48
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           +FFFFFF     FFFFFF
Sbjct: 91  FFFFFFFFFFFFFFFFFF 108



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +2

Query: 614 YFFFFFFXXXXXFFFFFF 667
           Y FFFFF     FFFFFF
Sbjct: 85  YAFFFFFFFFFFFFFFFF 102


>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
          Length = 440

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -3

Query: 667 KKKKKKXXXXXKKKKKKIXF 608
           KKKKKK     KKKKKK+ F
Sbjct: 383 KKKKKKKKKKKKKKKKKLRF 402


>11_04_0350 - 16658497-16659015
          Length = 172

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 667 KKKKKKXXXXXKKKKKKIXF 608
           KKKKKK     KKKKKK+ +
Sbjct: 38  KKKKKKKKKKKKKKKKKVRY 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,992,364
Number of Sequences: 37544
Number of extensions: 257616
Number of successful extensions: 6551
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3454
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)