Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_T7_K08
         (1009 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   2.3  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   2.3  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   2.3  
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    29   4.0  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/60 (26%), Positives = 17/60 (28%)
 Frame = -3

Query: 617 PPPXXXKKXXGXPPPPPXXXXXFXXXKXKKXXXGGGGXXPPPXXXXXXGPXXXXXXXWXP 438
           PPP       G PPPPP                G  G  PPP       P       + P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 805



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +1

Query: 415 PPPPXXLPGXXXXXXXXXGPXWXXXXGGGXXPPPP 519
           PPPP  LP           P       GG  PPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763



 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +1

Query: 415 PPPPXXLPGXXXXXXXXXGPXWXXXXGGGXXPPPP 519
           PPPP  LP           P       GG  PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/60 (26%), Positives = 17/60 (28%)
 Frame = -3

Query: 617 PPPXXXKKXXGXPPPPPXXXXXFXXXKXKKXXXGGGGXXPPPXXXXXXGPXXXXXXXWXP 438
           PPP       G PPPPP                G  G  PPP       P       + P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 805



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +1

Query: 415 PPPPXXLPGXXXXXXXXXGPXWXXXXGGGXXPPPP 519
           PPPP  LP           P       GG  PPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763



 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +1

Query: 415 PPPPXXLPGXXXXXXXXXGPXWXXXXGGGXXPPPP 519
           PPPP  LP           P       GG  PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/60 (26%), Positives = 17/60 (28%)
 Frame = -3

Query: 617 PPPXXXKKXXGXPPPPPXXXXXFXXXKXKKXXXGGGGXXPPPXXXXXXGPXXXXXXXWXP 438
           PPP       G PPPPP                G  G  PPP       P       + P
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLP 388



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +1

Query: 415 PPPPXXLPGXXXXXXXXXGPXWXXXXGGGXXPPPP 519
           PPPP  LP           P       GG  PPPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346



 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +1

Query: 415 PPPPXXLPGXXXXXXXXXGPXWXXXXGGGXXPPPP 519
           PPPP  LP           P       GG  PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330


>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = -3

Query: 617 PPPXXXKKXXGXPPPPPXXXXXFXXXKXKKXXXGGGGXXPPP 492
           PPP       G PPPPP                  GG  PPP
Sbjct: 539 PPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPP 580



 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = -3

Query: 617 PPPXXXKKXXGXPPPPPXXXXXFXXXKXKKXXXGGGGXXPPP 492
           PPP       G PPPPP                 GG   PPP
Sbjct: 540 PPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPP 581


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,989,550
Number of Sequences: 27780
Number of extensions: 172533
Number of successful extensions: 513
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2646946214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)